Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC7.43□□□□□ -1.22
COL1A1P02452 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC7.43□□□□□ -1.22
COL1A1P02452 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC7.43□□□□□ -1.22
COL1A1P02452 AC011504.1-201ENST00000623331 4103 ntBASIC7.42□□□□□ -1.22
COL1A1P02452 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC7.42□□□□□ -1.22
COL1A1P02452 SYTL5-202ENST00000456733 4704 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
COL1A1P02452 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC7.42□□□□□ -1.22
COL1A1P02452 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC7.42□□□□□ -1.22
COL1A1P02452 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC7.42□□□□□ -1.22
COL1A1P02452 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
COL1A1P02452 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
COL1A1P02452 PRICKLE2-201ENST00000295902 7918 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
COL1A1P02452 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
COL1A1P02452 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC7.42□□□□□ -1.22
COL1A1P02452 DSCAM-203ENST00000617870 6176 ntTSL 5 BASIC7.42□□□□□ -1.22
COL1A1P02452 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC7.42□□□□□ -1.22
COL1A1P02452 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
COL1A1P02452 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC7.42□□□□□ -1.22
COL1A1P02452 PARP4P1-201ENST00000435945 2337 ntBASIC7.42□□□□□ -1.22
COL1A1P02452 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC7.42□□□□□ -1.22
COL1A1P02452 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
COL1A1P02452 AC011369.2-201ENST00000624423 1567 ntBASIC7.42□□□□□ -1.22
COL1A1P02452 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC7.42□□□□□ -1.22
COL1A1P02452 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
COL1A1P02452 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC7.42□□□□□ -1.22
COL1A1P02452 RNA5SP478-201ENST00000364657 115 ntBASIC7.42□□□□□ -1.22
COL1A1P02452 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC7.42□□□□□ -1.22
COL1A1P02452 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC7.42□□□□□ -1.22
COL1A1P02452 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
COL1A1P02452 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC7.42□□□□□ -1.22
COL1A1P02452 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC7.42□□□□□ -1.22
COL1A1P02452 RPL35AP31-201ENST00000418340 337 ntBASIC7.42□□□□□ -1.22
COL1A1P02452 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC7.42□□□□□ -1.22
COL1A1P02452 SEPT14P12-201ENST00000442280 560 ntBASIC7.42□□□□□ -1.22
COL1A1P02452 TRIM60P16-201ENST00000444048 694 ntBASIC7.42□□□□□ -1.22
COL1A1P02452 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
COL1A1P02452 AL445665.1-202ENST00000452436 324 ntBASIC7.42□□□□□ -1.22
COL1A1P02452 GEMIN2P1-201ENST00000454246 752 ntBASIC7.42□□□□□ -1.22
COL1A1P02452 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC7.42□□□□□ -1.22
COL1A1P02452 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC7.42□□□□□ -1.22
COL1A1P02452 LIAS-205ENST00000509519 1005 ntTSL 2 BASIC7.42□□□□□ -1.22
COL1A1P02452 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC7.42□□□□□ -1.22
COL1A1P02452 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC7.42□□□□□ -1.22
COL1A1P02452 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC7.42□□□□□ -1.22
COL1A1P02452 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC7.42□□□□□ -1.22
COL1A1P02452 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
COL1A1P02452 KCTD9P4-201ENST00000526766 1166 ntBASIC7.42□□□□□ -1.22
COL1A1P02452 ZNF322P1-201ENST00000568013 1209 ntBASIC7.42□□□□□ -1.22
COL1A1P02452 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
COL1A1P02452 OR7E18P-201ENST00000592589 702 ntBASIC7.42□□□□□ -1.22
COL1A1P02452 COX6CP7-201ENST00000597056 208 ntBASIC7.42□□□□□ -1.22
COL1A1P02452 ITGA2-201ENST00000296585 7869 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
COL1A1P02452 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC7.41□□□□□ -1.22
COL1A1P02452 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
COL1A1P02452 LIG3-202ENST00000378526 8400 ntAPPRIS P4 TSL 1 (best) BASIC7.41□□□□□ -1.22
COL1A1P02452 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC7.41□□□□□ -1.22
COL1A1P02452 FAM186A-201ENST00000327337 7127 ntAPPRIS P2 TSL 5 BASIC7.41□□□□□ -1.22
COL1A1P02452 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
COL1A1P02452 HIVEP2-202ENST00000367603 9724 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
COL1A1P02452 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC7.41□□□□□ -1.22
COL1A1P02452 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC7.41□□□□□ -1.22
COL1A1P02452 RNF19BPY-201ENST00000458209 1550 ntBASIC7.41□□□□□ -1.22
COL1A1P02452 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
COL1A1P02452 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC7.41□□□□□ -1.22
COL1A1P02452 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
COL1A1P02452 TCEAL8-201ENST00000360000 1131 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
COL1A1P02452 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC7.41□□□□□ -1.22
COL1A1P02452 TCEAL8-202ENST00000372685 1222 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
COL1A1P02452 RN7SKP293-201ENST00000411389 296 ntBASIC7.41□□□□□ -1.22
COL1A1P02452 GAS5-202ENST00000414075 413 ntTSL 2 BASIC7.41□□□□□ -1.22
COL1A1P02452 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC7.41□□□□□ -1.22
COL1A1P02452 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC7.41□□□□□ -1.22
COL1A1P02452 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC7.41□□□□□ -1.22
COL1A1P02452 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC7.41□□□□□ -1.22
COL1A1P02452 AP006222.1-205ENST00000450734 457 ntBASIC7.41□□□□□ -1.22
COL1A1P02452 AC110749.1-201ENST00000462007 357 ntBASIC7.41□□□□□ -1.22
COL1A1P02452 AC073594.1-201ENST00000462065 364 ntBASIC7.41□□□□□ -1.22
COL1A1P02452 RN7SL269P-201ENST00000467795 305 ntBASIC7.41□□□□□ -1.22
COL1A1P02452 AC124945.1-201ENST00000485133 188 ntBASIC7.41□□□□□ -1.22
COL1A1P02452 AL136038.1-201ENST00000497246 351 ntBASIC7.41□□□□□ -1.22
COL1A1P02452 RN7SL284P-201ENST00000498823 275 ntBASIC7.41□□□□□ -1.22
COL1A1P02452 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC7.41□□□□□ -1.22
COL1A1P02452 AP004607.6-201ENST00000525033 1202 ntBASIC7.41□□□□□ -1.22
COL1A1P02452 AC108449.2-201ENST00000560865 552 ntTSL 3 BASIC7.41□□□□□ -1.22
COL1A1P02452 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC7.41□□□□□ -1.22
COL1A1P02452 AC010547.6-201ENST00000571789 193 ntBASIC7.41□□□□□ -1.22
COL1A1P02452 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC7.41□□□□□ -1.22
COL1A1P02452 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC7.41□□□□□ -1.22
COL1A1P02452 AL645933.2-201ENST00000606743 1207 ntBASIC7.41□□□□□ -1.22
COL1A1P02452 CGA-206ENST00000630630 832 ntTSL 2 BASIC7.41□□□□□ -1.22
COL1A1P02452 AL049767.1-202ENST00000637826 242 ntBASIC7.41□□□□□ -1.22
COL1A1P02452 LINC01128-205ENST00000445118 6606 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
COL1A1P02452 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC7.41□□□□□ -1.22
COL1A1P02452 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
COL1A1P02452 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC7.4□□□□□ -1.22
COL1A1P02452 CFAP54-202ENST00000524981 9766 ntAPPRIS P2 TSL 5 BASIC7.4□□□□□ -1.22
COL1A1P02452 AC130360.2-201ENST00000533477 1556 ntBASIC7.4□□□□□ -1.22
COL1A1P02452 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
COL1A1P02452 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC7.4□□□□□ -1.22
COL1A1P02452 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms