Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC4.67□□□□□ -1.66
HLA-DQA1P01909 AC090193.1-202ENST00000524355 566 ntTSL 4 BASIC4.67□□□□□ -1.66
HLA-DQA1P01909 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC4.67□□□□□ -1.66
HLA-DQA1P01909 PDCL3P1-201ENST00000534575 734 ntBASIC4.67□□□□□ -1.66
HLA-DQA1P01909 AC140063.1-201ENST00000541343 259 ntBASIC4.67□□□□□ -1.66
HLA-DQA1P01909 LALBA-202ENST00000549817 1243 ntTSL 5 BASIC4.67□□□□□ -1.66
HLA-DQA1P01909 AC007950.1-201ENST00000560465 615 ntTSL 3 BASIC4.67□□□□□ -1.66
HLA-DQA1P01909 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC4.67□□□□□ -1.66
HLA-DQA1P01909 AC024267.3-201ENST00000579673 562 ntTSL 5 BASIC4.67□□□□□ -1.66
HLA-DQA1P01909 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC4.67□□□□□ -1.66
HLA-DQA1P01909 AC024451.4-201ENST00000602578 752 ntBASIC4.67□□□□□ -1.66
HLA-DQA1P01909 AL590032.1-201ENST00000604920 252 ntBASIC4.67□□□□□ -1.66
HLA-DQA1P01909 AL353807.4-201ENST00000604995 257 ntBASIC4.67□□□□□ -1.66
HLA-DQA1P01909 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC4.67□□□□□ -1.66
HLA-DQA1P01909 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC4.67□□□□□ -1.66
HLA-DQA1P01909 AC103564.3-201ENST00000621194 220 ntBASIC4.67□□□□□ -1.66
HLA-DQA1P01909 AC005618.4-201ENST00000625053 554 ntBASIC4.67□□□□□ -1.66
HLA-DQA1P01909 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC4.67□□□□□ -1.66
HLA-DQA1P01909 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC4.67□□□□□ -1.66
HLA-DQA1P01909 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
HLA-DQA1P01909 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC4.67□□□□□ -1.66
HLA-DQA1P01909 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC4.67□□□□□ -1.66
HLA-DQA1P01909 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
HLA-DQA1P01909 TTC33-207ENST00000637375 1824 ntTSL 5 BASIC4.67□□□□□ -1.66
HLA-DQA1P01909 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC4.67□□□□□ -1.66
HLA-DQA1P01909 HDAC1P2-201ENST00000453661 1398 ntBASIC4.66□□□□□ -1.66
HLA-DQA1P01909 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC4.66□□□□□ -1.66
HLA-DQA1P01909 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC4.66□□□□□ -1.66
HLA-DQA1P01909 HSP90AA2P-201ENST00000530115 2196 ntBASIC4.66□□□□□ -1.66
HLA-DQA1P01909 NUDT5-202ENST00000378937 919 ntTSL 3 BASIC4.66□□□□□ -1.66
HLA-DQA1P01909 S100B-203ENST00000397648 839 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
HLA-DQA1P01909 AL136100.1-201ENST00000407696 330 ntBASIC4.66□□□□□ -1.66
HLA-DQA1P01909 RNA5SP280-201ENST00000411230 115 ntBASIC4.66□□□□□ -1.66
HLA-DQA1P01909 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC4.66□□□□□ -1.66
HLA-DQA1P01909 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC4.66□□□□□ -1.66
HLA-DQA1P01909 AC106870.2-201ENST00000421411 691 ntTSL 3 BASIC4.66□□□□□ -1.66
HLA-DQA1P01909 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC4.66□□□□□ -1.66
HLA-DQA1P01909 MTND2P40-201ENST00000436718 841 ntBASIC4.66□□□□□ -1.66
HLA-DQA1P01909 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC4.66□□□□□ -1.66
HLA-DQA1P01909 FAM177B-204ENST00000445590 1096 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
HLA-DQA1P01909 FAM155A-IT1-201ENST00000449551 819 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HLA-DQA1P01909 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC4.66□□□□□ -1.66
HLA-DQA1P01909 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC4.66□□□□□ -1.66
HLA-DQA1P01909 RAB28P2-201ENST00000454299 641 ntBASIC4.66□□□□□ -1.66
HLA-DQA1P01909 VPS25P1-201ENST00000455691 508 ntBASIC4.66□□□□□ -1.66
HLA-DQA1P01909 AC114982.2-201ENST00000461396 358 ntBASIC4.66□□□□□ -1.66
HLA-DQA1P01909 AC025271.1-201ENST00000485045 429 ntBASIC4.66□□□□□ -1.66
HLA-DQA1P01909 KATNBL1P4-201ENST00000503545 918 ntBASIC4.66□□□□□ -1.66
HLA-DQA1P01909 AC106760.2-201ENST00000504159 619 ntBASIC4.66□□□□□ -1.66
HLA-DQA1P01909 AC131392.1-201ENST00000506490 633 ntBASIC4.66□□□□□ -1.66
HLA-DQA1P01909 AC091849.1-201ENST00000509920 121 ntBASIC4.66□□□□□ -1.66
HLA-DQA1P01909 EGFLAM-211ENST00000514476 676 ntTSL 2 BASIC4.66□□□□□ -1.66
HLA-DQA1P01909 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC4.66□□□□□ -1.66
HLA-DQA1P01909 XAGE1B-205ENST00000518075 472 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
HLA-DQA1P01909 COX6B1P4-201ENST00000519826 484 ntBASIC4.66□□□□□ -1.66
HLA-DQA1P01909 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC4.66□□□□□ -1.66
HLA-DQA1P01909 IGHVII-49-1-201ENST00000521760 224 ntBASIC4.66□□□□□ -1.66
HLA-DQA1P01909 IGHVIII-25-1-201ENST00000522143 241 ntBASIC4.66□□□□□ -1.66
HLA-DQA1P01909 AC138832.1-201ENST00000522871 556 ntBASIC4.66□□□□□ -1.66
HLA-DQA1P01909 OR5D2P-201ENST00000524390 911 ntBASIC4.66□□□□□ -1.66
HLA-DQA1P01909 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC4.66□□□□□ -1.66
HLA-DQA1P01909 RPA2P3-201ENST00000533268 770 ntBASIC4.66□□□□□ -1.66
HLA-DQA1P01909 SLC14A1-206ENST00000535474 1048 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HLA-DQA1P01909 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC4.66□□□□□ -1.66
HLA-DQA1P01909 PCED1B-AS1-207ENST00000551432 522 ntTSL 5 BASIC4.66□□□□□ -1.66
HLA-DQA1P01909 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC4.66□□□□□ -1.66
HLA-DQA1P01909 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC4.66□□□□□ -1.66
HLA-DQA1P01909 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC4.66□□□□□ -1.66
HLA-DQA1P01909 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC4.66□□□□□ -1.66
HLA-DQA1P01909 AC105036.1-201ENST00000566222 271 ntBASIC4.66□□□□□ -1.66
HLA-DQA1P01909 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC4.66□□□□□ -1.66
HLA-DQA1P01909 AP001122.1-201ENST00000572256 541 ntTSL 4 BASIC4.66□□□□□ -1.66
HLA-DQA1P01909 AC090286.3-201ENST00000573133 187 ntBASIC4.66□□□□□ -1.66
HLA-DQA1P01909 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC4.66□□□□□ -1.66
HLA-DQA1P01909 AC005208.1-202ENST00000587325 725 ntTSL 3 BASIC4.66□□□□□ -1.66
HLA-DQA1P01909 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC4.66□□□□□ -1.66
HLA-DQA1P01909 AC092032.1-201ENST00000603090 165 ntBASIC4.66□□□□□ -1.66
HLA-DQA1P01909 AC012510.1-201ENST00000607946 759 ntBASIC4.66□□□□□ -1.66
HLA-DQA1P01909 MIR4435-2HG-219ENST00000609220 883 ntTSL 3 BASIC4.66□□□□□ -1.66
HLA-DQA1P01909 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC4.66□□□□□ -1.66
HLA-DQA1P01909 AC007671.1-201ENST00000616957 830 ntBASIC4.66□□□□□ -1.66
HLA-DQA1P01909 AC087894.3-201ENST00000623682 349 ntBASIC4.66□□□□□ -1.66
HLA-DQA1P01909 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC4.66□□□□□ -1.66
HLA-DQA1P01909 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HLA-DQA1P01909 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
HLA-DQA1P01909 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HLA-DQA1P01909 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
HLA-DQA1P01909 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
HLA-DQA1P01909 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
HLA-DQA1P01909 EEF1A1P30-201ENST00000429708 1315 ntBASIC4.66□□□□□ -1.66
HLA-DQA1P01909 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HLA-DQA1P01909 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC4.66□□□□□ -1.66
HLA-DQA1P01909 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
HLA-DQA1P01909 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
HLA-DQA1P01909 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
HLA-DQA1P01909 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
HLA-DQA1P01909 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC4.65□□□□□ -1.66
HLA-DQA1P01909 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC4.65□□□□□ -1.66
HLA-DQA1P01909 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
HLA-DQA1P01909 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms