Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC6.1□□□□□ -1.43
TNFP01375 MIR130B-202ENST00000385018 82 ntBASIC6.1□□□□□ -1.43
TNFP01375 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
TNFP01375 AL445238.1-204ENST00000400311 463 ntBASIC6.1□□□□□ -1.43
TNFP01375 AL132875.1-201ENST00000403623 949 ntBASIC6.1□□□□□ -1.43
TNFP01375 RPL35AP31-201ENST00000418340 337 ntBASIC6.1□□□□□ -1.43
TNFP01375 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC6.1□□□□□ -1.43
TNFP01375 RPL12P24-201ENST00000474907 486 ntBASIC6.1□□□□□ -1.43
TNFP01375 AL158068.1-201ENST00000506116 616 ntBASIC6.1□□□□□ -1.43
TNFP01375 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC6.1□□□□□ -1.43
TNFP01375 CR383658.1-201ENST00000514609 734 ntBASIC6.1□□□□□ -1.43
TNFP01375 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC6.1□□□□□ -1.43
TNFP01375 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC6.1□□□□□ -1.43
TNFP01375 TRIM77BP-201ENST00000524985 1119 ntBASIC6.1□□□□□ -1.43
TNFP01375 AP003396.4-201ENST00000527574 265 ntBASIC6.1□□□□□ -1.43
TNFP01375 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC6.1□□□□□ -1.43
TNFP01375 AC108449.2-201ENST00000560865 552 ntTSL 3 BASIC6.1□□□□□ -1.43
TNFP01375 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
TNFP01375 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC6.1□□□□□ -1.43
TNFP01375 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC6.1□□□□□ -1.43
TNFP01375 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC6.1□□□□□ -1.43
TNFP01375 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC6.1□□□□□ -1.43
TNFP01375 AL591167.1-201ENST00000607321 456 ntBASIC6.1□□□□□ -1.43
TNFP01375 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC6.1□□□□□ -1.43
TNFP01375 AL096712.1-201ENST00000614561 159 ntBASIC6.1□□□□□ -1.43
TNFP01375 AC245014.3-201ENST00000618589 347 ntBASIC6.1□□□□□ -1.43
TNFP01375 AC024884.1-201ENST00000620583 399 ntBASIC6.1□□□□□ -1.43
TNFP01375 AC129778.1-202ENST00000623812 261 ntBASIC6.1□□□□□ -1.43
TNFP01375 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC6.1□□□□□ -1.43
TNFP01375 AL591379.1-207ENST00000635982 261 ntBASIC6.1□□□□□ -1.43
TNFP01375 AMYH02020865.1-205ENST00000636189 261 ntBASIC6.1□□□□□ -1.43
TNFP01375 HYAL4-201ENST00000223026 2407 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
TNFP01375 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
TNFP01375 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
TNFP01375 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
TNFP01375 CASC19-238ENST00000641523 1558 ntBASIC6.1□□□□□ -1.43
TNFP01375 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
TNFP01375 SALL4P7-201ENST00000555779 3120 ntBASIC6.09□□□□□ -1.43
TNFP01375 EEF1A1P21-201ENST00000512363 1344 ntBASIC6.09□□□□□ -1.43
TNFP01375 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.09□□□□□ -1.43
TNFP01375 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
TNFP01375 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
TNFP01375 OR10D3-201ENST00000318666 1030 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
TNFP01375 AC023490.2-201ENST00000359859 470 ntBASIC6.09□□□□□ -1.43
TNFP01375 CRP-204ENST00000368112 787 ntTSL 2 BASIC6.09□□□□□ -1.43
TNFP01375 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC6.09□□□□□ -1.43
TNFP01375 MIR433-201ENST00000384837 93 ntBASIC6.09□□□□□ -1.43
TNFP01375 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC6.09□□□□□ -1.43
TNFP01375 AL389925.1-201ENST00000432257 728 ntBASIC6.09□□□□□ -1.43
TNFP01375 ATP6V1E1P1-201ENST00000439215 681 ntBASIC6.09□□□□□ -1.43
TNFP01375 SEPT14P12-201ENST00000442280 560 ntBASIC6.09□□□□□ -1.43
TNFP01375 AC092967.1-201ENST00000449016 481 ntBASIC6.09□□□□□ -1.43
TNFP01375 AC016724.1-201ENST00000453215 421 ntBASIC6.09□□□□□ -1.43
TNFP01375 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC6.09□□□□□ -1.43
TNFP01375 AC109454.2-201ENST00000503470 520 ntTSL 5 BASIC6.09□□□□□ -1.43
TNFP01375 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
TNFP01375 UGT2A3P7-201ENST00000510485 734 ntBASIC6.09□□□□□ -1.43
TNFP01375 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC6.09□□□□□ -1.43
TNFP01375 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC6.09□□□□□ -1.43
TNFP01375 RN7SKP238-201ENST00000516483 249 ntBASIC6.09□□□□□ -1.43
TNFP01375 RNA5SP400-201ENST00000517155 111 ntBASIC6.09□□□□□ -1.43
TNFP01375 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC6.09□□□□□ -1.43
TNFP01375 AC021269.1-201ENST00000526860 705 ntBASIC6.09□□□□□ -1.43
TNFP01375 TRIM51DP-201ENST00000529746 596 ntBASIC6.09□□□□□ -1.43
TNFP01375 AP004609.2-201ENST00000532177 190 ntBASIC6.09□□□□□ -1.43
TNFP01375 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
TNFP01375 AL121579.2-201ENST00000555466 590 ntBASIC6.09□□□□□ -1.43
TNFP01375 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC6.09□□□□□ -1.43
TNFP01375 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC6.09□□□□□ -1.43
TNFP01375 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC6.09□□□□□ -1.43
TNFP01375 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC6.09□□□□□ -1.43
TNFP01375 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC6.09□□□□□ -1.43
TNFP01375 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
TNFP01375 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
TNFP01375 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
TNFP01375 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC6.09□□□□□ -1.43
TNFP01375 AC241584.2-201ENST00000637142 2090 ntBASIC6.09□□□□□ -1.43
TNFP01375 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC6.09□□□□□ -1.43
TNFP01375 UGT2B27P-201ENST00000505092 1620 ntBASIC6.09□□□□□ -1.43
TNFP01375 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC6.09□□□□□ -1.43
TNFP01375 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
TNFP01375 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.44
TNFP01375 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC6.09□□□□□ -1.44
TNFP01375 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
TNFP01375 AC061975.7-201ENST00000592016 2692 ntBASIC6.09□□□□□ -1.44
TNFP01375 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
TNFP01375 VTCN1-201ENST00000328189 2289 ntTSL 5 BASIC6.09□□□□□ -1.44
TNFP01375 MAPK10-287ENST00000641217 3037 ntBASIC6.09□□□□□ -1.44
TNFP01375 NEK11-201ENST00000356918 1874 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.44
TNFP01375 AC087477.2-202ENST00000558499 4856 ntTSL 4 BASIC6.09□□□□□ -1.44
TNFP01375 AL589993.1-201ENST00000407450 2524 ntBASIC6.08□□□□□ -1.44
TNFP01375 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC6.08□□□□□ -1.44
TNFP01375 AC007406.5-201ENST00000570140 3170 ntBASIC6.08□□□□□ -1.44
TNFP01375 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC6.08□□□□□ -1.44
TNFP01375 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
TNFP01375 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC6.08□□□□□ -1.44
TNFP01375 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
TNFP01375 EEF1A1P24-201ENST00000451469 1378 ntBASIC6.08□□□□□ -1.44
TNFP01375 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
TNFP01375 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms