Protein–RNA interactions for Protein: O95155

UBE4B, Ubiquitin conjugation factor E4 B, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4BO95155 HMGN1P16-201ENST00000508308 283 ntBASIC6.85□□□□□ -1.31
UBE4BO95155 CENPK-211ENST00000510693 1040 ntTSL 5 BASIC6.85□□□□□ -1.31
UBE4BO95155 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC6.85□□□□□ -1.31
UBE4BO95155 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC6.85□□□□□ -1.31
UBE4BO95155 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC6.85□□□□□ -1.31
UBE4BO95155 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC6.85□□□□□ -1.31
UBE4BO95155 AC018558.5-201ENST00000565840 952 ntBASIC6.85□□□□□ -1.31
UBE4BO95155 AC012676.3-201ENST00000614983 479 ntBASIC6.85□□□□□ -1.31
UBE4BO95155 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC6.85□□□□□ -1.31
UBE4BO95155 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC6.85□□□□□ -1.31
UBE4BO95155 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC6.85□□□□□ -1.31
UBE4BO95155 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
UBE4BO95155 USP9YP3-201ENST00000434481 1766 ntBASIC6.85□□□□□ -1.31
UBE4BO95155 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
UBE4BO95155 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC6.85□□□□□ -1.31
UBE4BO95155 AP001157.1-201ENST00000550837 2339 ntBASIC6.85□□□□□ -1.31
UBE4BO95155 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC6.85□□□□□ -1.31
UBE4BO95155 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC6.85□□□□□ -1.31
UBE4BO95155 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
UBE4BO95155 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.85□□□□□ -1.31
UBE4BO95155 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC6.85□□□□□ -1.31
UBE4BO95155 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC6.84□□□□□ -1.31
UBE4BO95155 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
UBE4BO95155 AL359091.1-201ENST00000449048 1734 ntBASIC6.84□□□□□ -1.31
UBE4BO95155 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
UBE4BO95155 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
UBE4BO95155 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC6.84□□□□□ -1.31
UBE4BO95155 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
UBE4BO95155 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC6.84□□□□□ -1.31
UBE4BO95155 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC6.84□□□□□ -1.31
UBE4BO95155 OR3D1P-201ENST00000438288 955 ntBASIC6.84□□□□□ -1.31
UBE4BO95155 GAPDHP23-201ENST00000444823 993 ntBASIC6.84□□□□□ -1.31
UBE4BO95155 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC6.84□□□□□ -1.31
UBE4BO95155 HIGD1AP16-201ENST00000450986 258 ntBASIC6.84□□□□□ -1.31
UBE4BO95155 AC114728.1-201ENST00000488289 483 ntBASIC6.84□□□□□ -1.31
UBE4BO95155 MTND6P8-201ENST00000503471 522 ntBASIC6.84□□□□□ -1.31
UBE4BO95155 GUSBP9-201ENST00000510138 584 ntBASIC6.84□□□□□ -1.31
UBE4BO95155 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC6.84□□□□□ -1.31
UBE4BO95155 AP001000.1-201ENST00000526843 742 ntBASIC6.84□□□□□ -1.31
UBE4BO95155 AC005632.2-201ENST00000564271 828 ntBASIC6.84□□□□□ -1.31
UBE4BO95155 AC090651.1-201ENST00000567865 634 ntBASIC6.84□□□□□ -1.31
UBE4BO95155 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
UBE4BO95155 AC009779.8-202ENST00000607990 932 ntBASIC6.84□□□□□ -1.31
UBE4BO95155 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC6.84□□□□□ -1.31
UBE4BO95155 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC6.84□□□□□ -1.31
UBE4BO95155 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC6.84□□□□□ -1.31
UBE4BO95155 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC6.84□□□□□ -1.31
UBE4BO95155 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
UBE4BO95155 AL133243.2-201ENST00000610331 1621 ntBASIC6.84□□□□□ -1.31
UBE4BO95155 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
UBE4BO95155 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.32
UBE4BO95155 RPS2P45-201ENST00000469997 2057 ntBASIC6.84□□□□□ -1.32
UBE4BO95155 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
UBE4BO95155 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.83□□□□□ -1.32
UBE4BO95155 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC6.83□□□□□ -1.32
UBE4BO95155 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
UBE4BO95155 AP002833.3-201ENST00000625075 2265 ntBASIC6.83□□□□□ -1.32
UBE4BO95155 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC6.83□□□□□ -1.32
UBE4BO95155 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC6.83□□□□□ -1.32
UBE4BO95155 AL360271.1-201ENST00000395679 510 ntBASIC6.83□□□□□ -1.32
UBE4BO95155 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
UBE4BO95155 AC099782.1-201ENST00000425889 474 ntBASIC6.83□□□□□ -1.32
UBE4BO95155 AL138899.2-201ENST00000439139 499 ntBASIC6.83□□□□□ -1.32
UBE4BO95155 KRTAP2-5P-201ENST00000446109 396 ntBASIC6.83□□□□□ -1.32
UBE4BO95155 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC6.83□□□□□ -1.32
UBE4BO95155 OR7E22P-201ENST00000478335 1035 ntBASIC6.83□□□□□ -1.32
UBE4BO95155 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC6.83□□□□□ -1.32
UBE4BO95155 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC6.83□□□□□ -1.32
UBE4BO95155 RNU6ATAC39P-201ENST00000516309 149 ntBASIC6.83□□□□□ -1.32
UBE4BO95155 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC6.83□□□□□ -1.32
UBE4BO95155 OLR1-209ENST00000543993 822 ntTSL 2 BASIC6.83□□□□□ -1.32
UBE4BO95155 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC6.83□□□□□ -1.32
UBE4BO95155 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC6.83□□□□□ -1.32
UBE4BO95155 AL137067.2-201ENST00000621202 131 ntBASIC6.83□□□□□ -1.32
UBE4BO95155 OR7A1P-202ENST00000641542 1158 ntBASIC6.83□□□□□ -1.32
UBE4BO95155 GDA-209ENST00000545168 5362 ntTSL 2 BASIC6.83□□□□□ -1.32
UBE4BO95155 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
UBE4BO95155 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
UBE4BO95155 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC6.83□□□□□ -1.32
UBE4BO95155 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC6.83□□□□□ -1.32
UBE4BO95155 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
UBE4BO95155 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
UBE4BO95155 DPY19L1P1-201ENST00000417811 2594 ntBASIC6.83□□□□□ -1.32
UBE4BO95155 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
UBE4BO95155 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
UBE4BO95155 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
UBE4BO95155 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC6.83□□□□□ -1.32
UBE4BO95155 AL117378.2-201ENST00000622916 1337 ntBASIC6.82□□□□□ -1.32
UBE4BO95155 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
UBE4BO95155 MIR188-201ENST00000385034 86 ntBASIC6.82□□□□□ -1.32
UBE4BO95155 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
UBE4BO95155 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC6.82□□□□□ -1.32
UBE4BO95155 AC007562.1-201ENST00000421819 517 ntBASIC6.82□□□□□ -1.32
UBE4BO95155 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC6.82□□□□□ -1.32
UBE4BO95155 IGLV3-4-201ENST00000432300 244 ntBASIC6.82□□□□□ -1.32
UBE4BO95155 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC6.82□□□□□ -1.32
UBE4BO95155 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC6.82□□□□□ -1.32
UBE4BO95155 AL645936.1-201ENST00000441979 518 ntBASIC6.82□□□□□ -1.32
UBE4BO95155 AC023274.2-201ENST00000445264 521 ntBASIC6.82□□□□□ -1.32
UBE4BO95155 AC007383.1-201ENST00000445875 636 ntBASIC6.82□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms