Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
HCN1O60741 CYP2AC1P-201ENST00000407830 1173 ntBASIC5.96□□□□□ -1.46
HCN1O60741 AC017078.1-201ENST00000416146 368 ntBASIC5.96□□□□□ -1.46
HCN1O60741 CYCSP52-201ENST00000422857 310 ntBASIC5.96□□□□□ -1.46
HCN1O60741 AC097721.1-201ENST00000427150 1253 ntBASIC5.96□□□□□ -1.46
HCN1O60741 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC5.96□□□□□ -1.46
HCN1O60741 FGF12-202ENST00000430714 603 ntTSL 2 BASIC5.96□□□□□ -1.46
HCN1O60741 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC5.96□□□□□ -1.46
HCN1O60741 VN1R38P-201ENST00000450265 887 ntBASIC5.96□□□□□ -1.46
HCN1O60741 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC5.96□□□□□ -1.46
HCN1O60741 CCNJP2-201ENST00000457810 1163 ntBASIC5.96□□□□□ -1.46
HCN1O60741 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC5.96□□□□□ -1.46
HCN1O60741 AC117500.1-201ENST00000497352 755 ntBASIC5.96□□□□□ -1.46
HCN1O60741 AC122718.2-201ENST00000505325 591 ntBASIC5.96□□□□□ -1.46
HCN1O60741 AC131392.1-201ENST00000506490 633 ntBASIC5.96□□□□□ -1.46
HCN1O60741 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC5.96□□□□□ -1.46
HCN1O60741 AC093664.1-201ENST00000511779 289 ntBASIC5.96□□□□□ -1.46
HCN1O60741 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC5.96□□□□□ -1.46
HCN1O60741 SCARNA5-201ENST00000516201 276 ntBASIC5.96□□□□□ -1.46
HCN1O60741 RN7SKP70-201ENST00000516655 271 ntBASIC5.96□□□□□ -1.46
HCN1O60741 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC5.96□□□□□ -1.46
HCN1O60741 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC5.96□□□□□ -1.46
HCN1O60741 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC5.96□□□□□ -1.46
HCN1O60741 OLR1-209ENST00000543993 822 ntTSL 2 BASIC5.96□□□□□ -1.46
HCN1O60741 DCN-209ENST00000546745 1026 ntTSL 3 BASIC5.96□□□□□ -1.46
HCN1O60741 HNRNPCP1-201ENST00000556181 766 ntBASIC5.96□□□□□ -1.46
HCN1O60741 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC5.96□□□□□ -1.46
HCN1O60741 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC5.96□□□□□ -1.46
HCN1O60741 AC005828.7-201ENST00000607331 556 ntBASIC5.96□□□□□ -1.46
HCN1O60741 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC5.96□□□□□ -1.46
HCN1O60741 AL591926.1-201ENST00000620542 217 ntBASIC5.96□□□□□ -1.46
HCN1O60741 AC018692.2-201ENST00000624130 348 ntBASIC5.96□□□□□ -1.46
HCN1O60741 AP001153.1-201ENST00000641024 338 ntBASIC5.96□□□□□ -1.46
HCN1O60741 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
HCN1O60741 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC5.96□□□□□ -1.46
HCN1O60741 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC5.96□□□□□ -1.46
HCN1O60741 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.96□□□□□ -1.46
HCN1O60741 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
HCN1O60741 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
HCN1O60741 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC5.96□□□□□ -1.46
HCN1O60741 BTK-209ENST00000618050 2417 ntTSL 5 BASIC5.96□□□□□ -1.46
HCN1O60741 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC5.96□□□□□ -1.46
HCN1O60741 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.96□□□□□ -1.46
HCN1O60741 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
HCN1O60741 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
HCN1O60741 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
HCN1O60741 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
HCN1O60741 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
HCN1O60741 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC5.95□□□□□ -1.46
HCN1O60741 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
HCN1O60741 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC5.95□□□□□ -1.46
HCN1O60741 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
HCN1O60741 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.95□□□□□ -1.46
HCN1O60741 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
HCN1O60741 RNU1-84P-201ENST00000365447 164 ntBASIC5.95□□□□□ -1.46
HCN1O60741 LCN1P2-201ENST00000372030 223 ntBASIC5.95□□□□□ -1.46
HCN1O60741 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
HCN1O60741 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
HCN1O60741 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC5.95□□□□□ -1.46
HCN1O60741 AL121823.1-201ENST00000418369 741 ntTSL 3 BASIC5.95□□□□□ -1.46
HCN1O60741 RPSAP32-201ENST00000432681 526 ntBASIC5.95□□□□□ -1.46
HCN1O60741 AC097359.1-201ENST00000447946 463 ntBASIC5.95□□□□□ -1.46
HCN1O60741 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC5.95□□□□□ -1.46
HCN1O60741 NPM1P27-201ENST00000502784 830 ntBASIC5.95□□□□□ -1.46
HCN1O60741 AC091965.3-201ENST00000506236 208 ntBASIC5.95□□□□□ -1.46
HCN1O60741 AC093816.1-201ENST00000515076 913 ntBASIC5.95□□□□□ -1.46
HCN1O60741 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.95□□□□□ -1.46
HCN1O60741 AC008429.2-201ENST00000523057 864 ntBASIC5.95□□□□□ -1.46
HCN1O60741 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC5.95□□□□□ -1.46
HCN1O60741 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC5.95□□□□□ -1.46
HCN1O60741 RPL41P2-201ENST00000544920 409 ntBASIC5.95□□□□□ -1.46
HCN1O60741 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC5.95□□□□□ -1.46
HCN1O60741 RN7SL208P-201ENST00000577964 296 ntBASIC5.95□□□□□ -1.46
HCN1O60741 MIR4271-201ENST00000582451 67 ntBASIC5.95□□□□□ -1.46
HCN1O60741 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC5.95□□□□□ -1.46
HCN1O60741 AC063977.7-201ENST00000594454 337 ntBASIC5.95□□□□□ -1.46
HCN1O60741 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC5.95□□□□□ -1.46
HCN1O60741 AC004805.3-201ENST00000603178 310 ntBASIC5.95□□□□□ -1.46
HCN1O60741 OSTC-205ENST00000613215 876 ntTSL 2 BASIC5.95□□□□□ -1.46
HCN1O60741 XKRY2-202ENST00000623874 1581 ntBASIC5.95□□□□□ -1.46
HCN1O60741 XKRY-202ENST00000624960 1581 ntBASIC5.95□□□□□ -1.46
HCN1O60741 AL078581.3-201ENST00000627304 744 ntTSL 5 BASIC5.95□□□□□ -1.46
HCN1O60741 AL132640.3-201ENST00000630473 177 ntBASIC5.95□□□□□ -1.46
HCN1O60741 AC105749.1-201ENST00000631338 2008 ntBASIC5.95□□□□□ -1.46
HCN1O60741 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC5.95□□□□□ -1.46
HCN1O60741 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
HCN1O60741 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC5.95□□□□□ -1.46
HCN1O60741 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC5.95□□□□□ -1.46
HCN1O60741 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
HCN1O60741 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC5.95□□□□□ -1.46
HCN1O60741 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC5.95□□□□□ -1.46
HCN1O60741 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
HCN1O60741 AC105235.1-201ENST00000623208 1816 ntBASIC5.95□□□□□ -1.46
HCN1O60741 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
HCN1O60741 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
HCN1O60741 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
HCN1O60741 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
HCN1O60741 AC011369.2-201ENST00000624423 1567 ntBASIC5.94□□□□□ -1.46
HCN1O60741 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC5.94□□□□□ -1.46
HCN1O60741 AC005702.3-201ENST00000585345 1447 ntBASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 131.9 ms