Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 ZNF474-201ENST00000296600 1964 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
ZIC3O60481 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC5.77□□□□□ -1.49
ZIC3O60481 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
ZIC3O60481 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC5.77□□□□□ -1.49
ZIC3O60481 AC105235.1-201ENST00000623208 1816 ntBASIC5.77□□□□□ -1.49
ZIC3O60481 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
ZIC3O60481 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC5.77□□□□□ -1.49
ZIC3O60481 MIR7-1-201ENST00000384871 110 ntBASIC5.77□□□□□ -1.49
ZIC3O60481 AC099535.1-201ENST00000408928 371 ntBASIC5.77□□□□□ -1.49
ZIC3O60481 RN7SKP86-201ENST00000410454 332 ntBASIC5.77□□□□□ -1.49
ZIC3O60481 AC099782.1-201ENST00000425889 474 ntBASIC5.77□□□□□ -1.49
ZIC3O60481 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC5.77□□□□□ -1.49
ZIC3O60481 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC5.77□□□□□ -1.49
ZIC3O60481 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC5.77□□□□□ -1.49
ZIC3O60481 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC5.77□□□□□ -1.49
ZIC3O60481 EMC3-AS1-205ENST00000438698 534 ntBASIC5.77□□□□□ -1.49
ZIC3O60481 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC5.77□□□□□ -1.49
ZIC3O60481 RPS15AP29-201ENST00000445539 400 ntBASIC5.77□□□□□ -1.49
ZIC3O60481 EEF1B2P3-201ENST00000447718 678 ntBASIC5.77□□□□□ -1.49
ZIC3O60481 MTND2P39-201ENST00000457230 764 ntBASIC5.77□□□□□ -1.49
ZIC3O60481 TRBV8-1-201ENST00000481590 279 ntBASIC5.77□□□□□ -1.49
ZIC3O60481 AC005017.1-201ENST00000482002 490 ntBASIC5.77□□□□□ -1.49
ZIC3O60481 AC106800.3-201ENST00000511389 308 ntBASIC5.77□□□□□ -1.49
ZIC3O60481 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC5.77□□□□□ -1.49
ZIC3O60481 IGHV4-55-201ENST00000520889 368 ntBASIC5.77□□□□□ -1.49
ZIC3O60481 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
ZIC3O60481 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC5.77□□□□□ -1.49
ZIC3O60481 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC5.77□□□□□ -1.49
ZIC3O60481 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
ZIC3O60481 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC5.77□□□□□ -1.49
ZIC3O60481 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC5.77□□□□□ -1.49
ZIC3O60481 MIR6811-201ENST00000620409 58 ntBASIC5.77□□□□□ -1.49
ZIC3O60481 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
ZIC3O60481 OR7E91P-202ENST00000642062 1198 ntBASIC5.77□□□□□ -1.49
ZIC3O60481 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
ZIC3O60481 USP40-202ENST00000409945 1946 ntTSL 2 BASIC5.77□□□□□ -1.49
ZIC3O60481 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
ZIC3O60481 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
ZIC3O60481 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
ZIC3O60481 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
ZIC3O60481 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
ZIC3O60481 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
ZIC3O60481 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
ZIC3O60481 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
ZIC3O60481 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.49
ZIC3O60481 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC5.77□□□□□ -1.49
ZIC3O60481 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
ZIC3O60481 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
ZIC3O60481 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
ZIC3O60481 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC5.76□□□□□ -1.49
ZIC3O60481 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
ZIC3O60481 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC5.76□□□□□ -1.49
ZIC3O60481 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC5.76□□□□□ -1.49
ZIC3O60481 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC5.76□□□□□ -1.49
ZIC3O60481 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
ZIC3O60481 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
ZIC3O60481 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
ZIC3O60481 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC5.76□□□□□ -1.49
ZIC3O60481 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
ZIC3O60481 RNU6-883P-201ENST00000384597 107 ntBASIC5.76□□□□□ -1.49
ZIC3O60481 AC009518.1-202ENST00000415393 1229 ntTSL 2 BASIC5.76□□□□□ -1.49
ZIC3O60481 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC5.76□□□□□ -1.49
ZIC3O60481 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC5.76□□□□□ -1.49
ZIC3O60481 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC5.76□□□□□ -1.49
ZIC3O60481 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC5.76□□□□□ -1.49
ZIC3O60481 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
ZIC3O60481 SEPT14P12-201ENST00000442280 560 ntBASIC5.76□□□□□ -1.49
ZIC3O60481 POU5F1P5-201ENST00000445059 658 ntBASIC5.76□□□□□ -1.49
ZIC3O60481 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC5.76□□□□□ -1.49
ZIC3O60481 CYCSP53-201ENST00000455540 265 ntBASIC5.76□□□□□ -1.49
ZIC3O60481 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC5.76□□□□□ -1.49
ZIC3O60481 RPL31P53-201ENST00000457065 348 ntBASIC5.76□□□□□ -1.49
ZIC3O60481 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC5.76□□□□□ -1.49
ZIC3O60481 MARK2P8-201ENST00000476069 952 ntBASIC5.76□□□□□ -1.49
ZIC3O60481 MTND3P3-201ENST00000505004 126 ntBASIC5.76□□□□□ -1.49
ZIC3O60481 KHDC1P1-201ENST00000511053 508 ntBASIC5.76□□□□□ -1.49
ZIC3O60481 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC5.76□□□□□ -1.49
ZIC3O60481 RNA5SP206-201ENST00000516703 121 ntBASIC5.76□□□□□ -1.49
ZIC3O60481 AC073581.1-201ENST00000519036 575 ntBASIC5.76□□□□□ -1.49
ZIC3O60481 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC5.76□□□□□ -1.49
ZIC3O60481 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC5.76□□□□□ -1.49
ZIC3O60481 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC5.76□□□□□ -1.49
ZIC3O60481 RPL27A-211ENST00000532359 406 ntTSL 2 BASIC5.76□□□□□ -1.49
ZIC3O60481 AC024405.1-201ENST00000532521 1042 ntBASIC5.76□□□□□ -1.49
ZIC3O60481 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC5.76□□□□□ -1.49
ZIC3O60481 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC5.76□□□□□ -1.49
ZIC3O60481 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC5.76□□□□□ -1.49
ZIC3O60481 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC5.76□□□□□ -1.49
ZIC3O60481 SNORA74.4-201ENST00000607595 199 ntBASIC5.76□□□□□ -1.49
ZIC3O60481 MIR6721-201ENST00000617181 87 ntBASIC5.76□□□□□ -1.49
ZIC3O60481 AC012254.5-201ENST00000623573 478 ntBASIC5.76□□□□□ -1.49
ZIC3O60481 AC111152.1-202ENST00000635848 339 ntBASIC5.76□□□□□ -1.49
ZIC3O60481 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC5.76□□□□□ -1.49
ZIC3O60481 AP000866.6-201ENST00000638898 3579 ntBASIC5.76□□□□□ -1.49
ZIC3O60481 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
ZIC3O60481 AL136984.1-201ENST00000607611 1893 ntBASIC5.76□□□□□ -1.49
ZIC3O60481 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC5.76□□□□□ -1.49
ZIC3O60481 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC5.76□□□□□ -1.49
ZIC3O60481 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC5.76□□□□□ -1.49
ZIC3O60481 EEF1A1P24-201ENST00000451469 1378 ntBASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms