Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC5.85□□□□□ -1.47
NPIPA3F8WFD2 LINC02495-203ENST00000636704 242 ntBASIC5.85□□□□□ -1.47
NPIPA3F8WFD2 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC5.85□□□□□ -1.47
NPIPA3F8WFD2 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
NPIPA3F8WFD2 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC5.85□□□□□ -1.47
NPIPA3F8WFD2 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
NPIPA3F8WFD2 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
NPIPA3F8WFD2 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC5.85□□□□□ -1.47
NPIPA3F8WFD2 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC5.85□□□□□ -1.47
NPIPA3F8WFD2 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC5.85□□□□□ -1.47
NPIPA3F8WFD2 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
NPIPA3F8WFD2 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC5.84□□□□□ -1.47
NPIPA3F8WFD2 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
NPIPA3F8WFD2 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
NPIPA3F8WFD2 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC5.84□□□□□ -1.47
NPIPA3F8WFD2 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC5.84□□□□□ -1.47
NPIPA3F8WFD2 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
NPIPA3F8WFD2 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC5.84□□□□□ -1.47
NPIPA3F8WFD2 RNA5SP350-201ENST00000363298 111 ntBASIC5.84□□□□□ -1.47
NPIPA3F8WFD2 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC5.84□□□□□ -1.47
NPIPA3F8WFD2 AC009518.1-202ENST00000415393 1229 ntTSL 2 BASIC5.84□□□□□ -1.47
NPIPA3F8WFD2 MTND2P12-201ENST00000417560 1252 ntBASIC5.84□□□□□ -1.47
NPIPA3F8WFD2 RPL7AP14-201ENST00000424041 802 ntBASIC5.84□□□□□ -1.47
NPIPA3F8WFD2 FTO-202ENST00000431610 707 ntTSL 3 BASIC5.84□□□□□ -1.47
NPIPA3F8WFD2 AK3P5-201ENST00000432033 519 ntBASIC5.84□□□□□ -1.47
NPIPA3F8WFD2 MGAT2P1-201ENST00000449718 797 ntBASIC5.84□□□□□ -1.47
NPIPA3F8WFD2 HMGB3P14-201ENST00000494195 599 ntBASIC5.84□□□□□ -1.47
NPIPA3F8WFD2 AC112184.1-201ENST00000505179 312 ntBASIC5.84□□□□□ -1.47
NPIPA3F8WFD2 AC091874.2-201ENST00000505889 720 ntBASIC5.84□□□□□ -1.47
NPIPA3F8WFD2 AC091965.3-201ENST00000506236 208 ntBASIC5.84□□□□□ -1.47
NPIPA3F8WFD2 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC5.84□□□□□ -1.47
NPIPA3F8WFD2 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC5.84□□□□□ -1.47
NPIPA3F8WFD2 AL133399.1-201ENST00000527476 298 ntBASIC5.84□□□□□ -1.47
NPIPA3F8WFD2 AC108136.1-201ENST00000530350 631 ntTSL 5 BASIC5.84□□□□□ -1.47
NPIPA3F8WFD2 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC5.84□□□□□ -1.47
NPIPA3F8WFD2 AC006512.2-201ENST00000543250 486 ntBASIC5.84□□□□□ -1.47
NPIPA3F8WFD2 AC234775.3-201ENST00000564612 656 ntBASIC5.84□□□□□ -1.47
NPIPA3F8WFD2 AC004232.2-201ENST00000574245 821 ntBASIC5.84□□□□□ -1.47
NPIPA3F8WFD2 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC5.84□□□□□ -1.47
NPIPA3F8WFD2 DYNLL1P1-201ENST00000595442 269 ntBASIC5.84□□□□□ -1.47
NPIPA3F8WFD2 OR7A11P-201ENST00000597719 953 ntBASIC5.84□□□□□ -1.47
NPIPA3F8WFD2 AC079315.1-201ENST00000602952 623 ntBASIC5.84□□□□□ -1.47
NPIPA3F8WFD2 AL049840.6-201ENST00000604583 345 ntBASIC5.84□□□□□ -1.47
NPIPA3F8WFD2 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC5.84□□□□□ -1.47
NPIPA3F8WFD2 MIR6861-201ENST00000618657 64 ntBASIC5.84□□□□□ -1.47
NPIPA3F8WFD2 MIR6811-201ENST00000620409 58 ntBASIC5.84□□□□□ -1.47
NPIPA3F8WFD2 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC5.84□□□□□ -1.47
NPIPA3F8WFD2 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC5.84□□□□□ -1.47
NPIPA3F8WFD2 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
NPIPA3F8WFD2 AP004289.1-201ENST00000436307 2205 ntBASIC5.84□□□□□ -1.47
NPIPA3F8WFD2 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC5.84□□□□□ -1.47
NPIPA3F8WFD2 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
NPIPA3F8WFD2 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
NPIPA3F8WFD2 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.84□□□□□ -1.47
NPIPA3F8WFD2 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
NPIPA3F8WFD2 CASC19-246ENST00000641625 1606 ntBASIC5.84□□□□□ -1.47
NPIPA3F8WFD2 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC5.84□□□□□ -1.48
NPIPA3F8WFD2 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC5.84□□□□□ -1.48
NPIPA3F8WFD2 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC5.84□□□□□ -1.48
NPIPA3F8WFD2 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC5.84□□□□□ -1.48
NPIPA3F8WFD2 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
NPIPA3F8WFD2 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
NPIPA3F8WFD2 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
NPIPA3F8WFD2 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
NPIPA3F8WFD2 PARP4P1-201ENST00000435945 2337 ntBASIC5.83□□□□□ -1.48
NPIPA3F8WFD2 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
NPIPA3F8WFD2 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
NPIPA3F8WFD2 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC5.83□□□□□ -1.48
NPIPA3F8WFD2 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
NPIPA3F8WFD2 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
NPIPA3F8WFD2 DACH2-207ENST00000510272 1764 ntTSL 2 BASIC5.83□□□□□ -1.48
NPIPA3F8WFD2 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
NPIPA3F8WFD2 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
NPIPA3F8WFD2 EEF1A1P12-201ENST00000443590 1346 ntBASIC5.83□□□□□ -1.48
NPIPA3F8WFD2 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
NPIPA3F8WFD2 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
NPIPA3F8WFD2 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
NPIPA3F8WFD2 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC5.83□□□□□ -1.48
NPIPA3F8WFD2 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
NPIPA3F8WFD2 BTK-209ENST00000618050 2417 ntTSL 5 BASIC5.83□□□□□ -1.48
NPIPA3F8WFD2 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
NPIPA3F8WFD2 STAG3L4-201ENST00000352103 530 ntBASIC5.83□□□□□ -1.48
NPIPA3F8WFD2 AL050335.1-201ENST00000396909 869 ntBASIC5.83□□□□□ -1.48
NPIPA3F8WFD2 ZNF705B-201ENST00000400120 1207 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
NPIPA3F8WFD2 RPL7P58-201ENST00000402913 758 ntBASIC5.83□□□□□ -1.48
NPIPA3F8WFD2 GCNT1P4-201ENST00000404096 329 ntBASIC5.83□□□□□ -1.48
NPIPA3F8WFD2 AL023284.3-201ENST00000407767 334 ntBASIC5.83□□□□□ -1.48
NPIPA3F8WFD2 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC5.83□□□□□ -1.48
NPIPA3F8WFD2 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC5.83□□□□□ -1.48
NPIPA3F8WFD2 AC002127.1-201ENST00000421305 225 ntBASIC5.83□□□□□ -1.48
NPIPA3F8WFD2 KCTD9P1-201ENST00000430462 1167 ntBASIC5.83□□□□□ -1.48
NPIPA3F8WFD2 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC5.83□□□□□ -1.48
NPIPA3F8WFD2 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC5.83□□□□□ -1.48
NPIPA3F8WFD2 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC5.83□□□□□ -1.48
NPIPA3F8WFD2 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC5.83□□□□□ -1.48
NPIPA3F8WFD2 AP002371.1-201ENST00000463604 433 ntBASIC5.83□□□□□ -1.48
NPIPA3F8WFD2 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
NPIPA3F8WFD2 AP002884.1-201ENST00000479691 655 ntBASIC5.83□□□□□ -1.48
NPIPA3F8WFD2 AL133372.1-201ENST00000493565 745 ntBASIC5.83□□□□□ -1.48
NPIPA3F8WFD2 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 218.1 ms