Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 AC068769.1-201ENST00000474767 2426 ntBASIC5.15□□□□□ -1.59
SRRM4A7MD48 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SRRM4A7MD48 MAPK10-287ENST00000641217 3037 ntBASIC5.15□□□□□ -1.59
SRRM4A7MD48 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC5.15□□□□□ -1.59
SRRM4A7MD48 CCDC150P1-201ENST00000537123 2215 ntBASIC5.15□□□□□ -1.59
SRRM4A7MD48 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC5.15□□□□□ -1.59
SRRM4A7MD48 AP000547.3-204ENST00000588548 2523 ntBASIC5.15□□□□□ -1.59
SRRM4A7MD48 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
SRRM4A7MD48 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC5.14□□□□□ -1.59
SRRM4A7MD48 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC5.14□□□□□ -1.59
SRRM4A7MD48 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
SRRM4A7MD48 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC5.14□□□□□ -1.59
SRRM4A7MD48 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
SRRM4A7MD48 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
SRRM4A7MD48 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
SRRM4A7MD48 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SRRM4A7MD48 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SRRM4A7MD48 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
SRRM4A7MD48 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
SRRM4A7MD48 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SRRM4A7MD48 RPL31P11-201ENST00000426558 1558 ntBASIC5.14□□□□□ -1.59
SRRM4A7MD48 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC5.14□□□□□ -1.59
SRRM4A7MD48 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
SRRM4A7MD48 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC5.14□□□□□ -1.59
SRRM4A7MD48 AC005225.5-201ENST00000623547 2225 ntBASIC5.14□□□□□ -1.59
SRRM4A7MD48 OR4D11-201ENST00000313253 936 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
SRRM4A7MD48 OR11H13P-201ENST00000359695 979 ntBASIC5.14□□□□□ -1.59
SRRM4A7MD48 RNU6-386P-201ENST00000362650 107 ntBASIC5.14□□□□□ -1.59
SRRM4A7MD48 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SRRM4A7MD48 MRPS33-202ENST00000393008 853 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SRRM4A7MD48 RN7SKP205-201ENST00000410999 307 ntBASIC5.14□□□□□ -1.59
SRRM4A7MD48 RN7SKP161-201ENST00000411110 305 ntBASIC5.14□□□□□ -1.59
SRRM4A7MD48 RNA5SP155-201ENST00000411154 129 ntBASIC5.14□□□□□ -1.59
SRRM4A7MD48 AJ239321.1-201ENST00000424255 564 ntBASIC5.14□□□□□ -1.59
SRRM4A7MD48 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC5.14□□□□□ -1.59
SRRM4A7MD48 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC5.14□□□□□ -1.59
SRRM4A7MD48 BBOF1-202ENST00000463558 550 ntAPPRIS ALT2 TSL 2 BASIC5.14□□□□□ -1.59
SRRM4A7MD48 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC5.14□□□□□ -1.59
SRRM4A7MD48 RPL5P33-201ENST00000487833 905 ntBASIC5.14□□□□□ -1.59
SRRM4A7MD48 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC5.14□□□□□ -1.59
SRRM4A7MD48 AC093664.1-201ENST00000511779 289 ntBASIC5.14□□□□□ -1.59
SRRM4A7MD48 MINOS1P4-201ENST00000515470 318 ntBASIC5.14□□□□□ -1.59
SRRM4A7MD48 RNA5SP96-201ENST00000516041 107 ntBASIC5.14□□□□□ -1.59
SRRM4A7MD48 CHEK2P2-201ENST00000554701 672 ntBASIC5.14□□□□□ -1.59
SRRM4A7MD48 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC5.14□□□□□ -1.59
SRRM4A7MD48 TPRX1P1-201ENST00000557620 319 ntBASIC5.14□□□□□ -1.59
SRRM4A7MD48 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SRRM4A7MD48 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC5.14□□□□□ -1.59
SRRM4A7MD48 AC068408.1-201ENST00000577406 1144 ntBASIC5.14□□□□□ -1.59
SRRM4A7MD48 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC5.14□□□□□ -1.59
SRRM4A7MD48 AC023389.2-201ENST00000580031 955 ntBASIC5.14□□□□□ -1.59
SRRM4A7MD48 AC004805.3-201ENST00000603178 310 ntBASIC5.14□□□□□ -1.59
SRRM4A7MD48 AC012175.1-201ENST00000603755 531 ntBASIC5.14□□□□□ -1.59
SRRM4A7MD48 AC073046.2-201ENST00000604756 527 ntBASIC5.14□□□□□ -1.59
SRRM4A7MD48 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC5.14□□□□□ -1.59
SRRM4A7MD48 OR7M1P-201ENST00000608946 533 ntBASIC5.14□□□□□ -1.59
SRRM4A7MD48 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC5.14□□□□□ -1.59
SRRM4A7MD48 Xist_exon4.1-201ENST00000615964 126 ntBASIC5.14□□□□□ -1.59
SRRM4A7MD48 AC022726.2-201ENST00000634673 547 ntBASIC5.14□□□□□ -1.59
SRRM4A7MD48 LINC02495-203ENST00000636704 242 ntBASIC5.14□□□□□ -1.59
SRRM4A7MD48 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC5.14□□□□□ -1.59
SRRM4A7MD48 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SRRM4A7MD48 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC5.14□□□□□ -1.59
SRRM4A7MD48 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SRRM4A7MD48 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
SRRM4A7MD48 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SRRM4A7MD48 GUCY1B2-204ENST00000531898 1979 ntBASIC5.14□□□□□ -1.59
SRRM4A7MD48 KYNUP2-201ENST00000582280 1329 ntBASIC5.14□□□□□ -1.59
SRRM4A7MD48 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SRRM4A7MD48 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SRRM4A7MD48 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
SRRM4A7MD48 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC5.13□□□□□ -1.59
SRRM4A7MD48 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SRRM4A7MD48 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SRRM4A7MD48 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC5.13□□□□□ -1.59
SRRM4A7MD48 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC5.13□□□□□ -1.59
SRRM4A7MD48 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC5.13□□□□□ -1.59
SRRM4A7MD48 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC5.13□□□□□ -1.59
SRRM4A7MD48 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC5.13□□□□□ -1.59
SRRM4A7MD48 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
SRRM4A7MD48 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
SRRM4A7MD48 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC5.13□□□□□ -1.59
SRRM4A7MD48 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SRRM4A7MD48 AL451046.1-201ENST00000406097 534 ntBASIC5.13□□□□□ -1.59
SRRM4A7MD48 PLGLB1-202ENST00000409310 960 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SRRM4A7MD48 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC5.13□□□□□ -1.59
SRRM4A7MD48 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC5.13□□□□□ -1.59
SRRM4A7MD48 AC116036.1-201ENST00000412199 367 ntBASIC5.13□□□□□ -1.59
SRRM4A7MD48 TMA16P2-201ENST00000413187 601 ntBASIC5.13□□□□□ -1.59
SRRM4A7MD48 AL121823.1-201ENST00000418369 741 ntTSL 3 BASIC5.13□□□□□ -1.59
SRRM4A7MD48 AL157884.1-201ENST00000424561 454 ntBASIC5.13□□□□□ -1.59
SRRM4A7MD48 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SRRM4A7MD48 RAB9AP5-201ENST00000437794 597 ntBASIC5.13□□□□□ -1.59
SRRM4A7MD48 RAB9AP2-201ENST00000443911 597 ntBASIC5.13□□□□□ -1.59
SRRM4A7MD48 RPL31P53-201ENST00000457065 348 ntBASIC5.13□□□□□ -1.59
SRRM4A7MD48 CTSLP6-201ENST00000458273 1002 ntBASIC5.13□□□□□ -1.59
SRRM4A7MD48 RN7SL83P-201ENST00000468131 297 ntBASIC5.13□□□□□ -1.59
SRRM4A7MD48 AC093827.1-201ENST00000480094 861 ntBASIC5.13□□□□□ -1.59
SRRM4A7MD48 AC105420.1-201ENST00000504389 582 ntBASIC5.13□□□□□ -1.59
SRRM4A7MD48 AC018645.1-201ENST00000505003 109 ntBASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 129.5 ms