Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-DRB4X5D2U9 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC4.79□□□□□ -1.64
HLA-DRB4X5D2U9 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-DRB4X5D2U9 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-DRB4X5D2U9 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC4.79□□□□□ -1.64
HLA-DRB4X5D2U9 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-DRB4X5D2U9 AC125238.2-201ENST00000430003 1440 ntBASIC4.79□□□□□ -1.64
HLA-DRB4X5D2U9 AC005702.3-201ENST00000585345 1447 ntBASIC4.79□□□□□ -1.64
HLA-DRB4X5D2U9 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-DRB4X5D2U9 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-DRB4X5D2U9 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-DRB4X5D2U9 ATP5A1P4-201ENST00000556888 1605 ntBASIC4.79□□□□□ -1.64
HLA-DRB4X5D2U9 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
HLA-DRB4X5D2U9 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC4.79□□□□□ -1.64
HLA-DRB4X5D2U9 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-DRB4X5D2U9 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
HLA-DRB4X5D2U9 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC4.79□□□□□ -1.64
HLA-DRB4X5D2U9 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
HLA-DRB4X5D2U9 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC4.78□□□□□ -1.64
HLA-DRB4X5D2U9 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HLA-DRB4X5D2U9 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
HLA-DRB4X5D2U9 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
HLA-DRB4X5D2U9 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HLA-DRB4X5D2U9 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
HLA-DRB4X5D2U9 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC4.78□□□□□ -1.64
HLA-DRB4X5D2U9 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HLA-DRB4X5D2U9 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HLA-DRB4X5D2U9 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HLA-DRB4X5D2U9 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HLA-DRB4X5D2U9 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HLA-DRB4X5D2U9 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
HLA-DRB4X5D2U9 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HLA-DRB4X5D2U9 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC4.78□□□□□ -1.64
HLA-DRB4X5D2U9 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
HLA-DRB4X5D2U9 RNU1-84P-201ENST00000365447 164 ntBASIC4.78□□□□□ -1.64
HLA-DRB4X5D2U9 GNG5P2-201ENST00000372054 207 ntBASIC4.78□□□□□ -1.64
HLA-DRB4X5D2U9 AL033519.1-201ENST00000407266 307 ntBASIC4.78□□□□□ -1.64
HLA-DRB4X5D2U9 RN7SKP161-201ENST00000411110 305 ntBASIC4.78□□□□□ -1.64
HLA-DRB4X5D2U9 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC4.78□□□□□ -1.64
HLA-DRB4X5D2U9 AC097721.1-201ENST00000427150 1253 ntBASIC4.78□□□□□ -1.64
HLA-DRB4X5D2U9 AC083862.1-201ENST00000427378 1242 ntBASIC4.78□□□□□ -1.64
HLA-DRB4X5D2U9 RPL5P2-201ENST00000429598 854 ntBASIC4.78□□□□□ -1.64
HLA-DRB4X5D2U9 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC4.78□□□□□ -1.64
HLA-DRB4X5D2U9 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC4.78□□□□□ -1.64
HLA-DRB4X5D2U9 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC4.78□□□□□ -1.64
HLA-DRB4X5D2U9 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC4.78□□□□□ -1.64
HLA-DRB4X5D2U9 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC4.78□□□□□ -1.64
HLA-DRB4X5D2U9 COX6B1P4-201ENST00000519826 484 ntBASIC4.78□□□□□ -1.64
HLA-DRB4X5D2U9 AC040934.1-201ENST00000523101 513 ntTSL 2 BASIC4.78□□□□□ -1.64
HLA-DRB4X5D2U9 AC107909.1-201ENST00000523226 595 ntTSL 5 BASIC4.78□□□□□ -1.64
HLA-DRB4X5D2U9 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC4.78□□□□□ -1.64
HLA-DRB4X5D2U9 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC4.78□□□□□ -1.64
HLA-DRB4X5D2U9 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC4.78□□□□□ -1.64
HLA-DRB4X5D2U9 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC4.78□□□□□ -1.64
HLA-DRB4X5D2U9 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC4.78□□□□□ -1.64
HLA-DRB4X5D2U9 LINC02457-201ENST00000552992 596 ntTSL 4 BASIC4.78□□□□□ -1.64
HLA-DRB4X5D2U9 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC4.78□□□□□ -1.64
HLA-DRB4X5D2U9 DPPA3P2-202ENST00000557188 1219 ntBASIC4.78□□□□□ -1.64
HLA-DRB4X5D2U9 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC4.78□□□□□ -1.64
HLA-DRB4X5D2U9 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC4.78□□□□□ -1.64
HLA-DRB4X5D2U9 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HLA-DRB4X5D2U9 AC022001.1-201ENST00000605193 268 ntBASIC4.78□□□□□ -1.64
HLA-DRB4X5D2U9 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC4.78□□□□□ -1.64
HLA-DRB4X5D2U9 AC018690.1-201ENST00000608144 626 ntBASIC4.78□□□□□ -1.64
HLA-DRB4X5D2U9 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HLA-DRB4X5D2U9 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC4.78□□□□□ -1.64
HLA-DRB4X5D2U9 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC4.78□□□□□ -1.64
HLA-DRB4X5D2U9 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HLA-DRB4X5D2U9 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC4.78□□□□□ -1.64
HLA-DRB4X5D2U9 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC4.78□□□□□ -1.64
HLA-DRB4X5D2U9 AC015799.1-201ENST00000622996 3122 ntBASIC4.78□□□□□ -1.64
HLA-DRB4X5D2U9 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
HLA-DRB4X5D2U9 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC4.78□□□□□ -1.64
HLA-DRB4X5D2U9 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC4.78□□□□□ -1.64
HLA-DRB4X5D2U9 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC4.78□□□□□ -1.64
HLA-DRB4X5D2U9 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
HLA-DRB4X5D2U9 LINC01616-201ENST00000561816 2280 ntBASIC4.77□□□□□ -1.65
HLA-DRB4X5D2U9 ZNF101P1-201ENST00000435701 1720 ntBASIC4.77□□□□□ -1.65
HLA-DRB4X5D2U9 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HLA-DRB4X5D2U9 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HLA-DRB4X5D2U9 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
HLA-DRB4X5D2U9 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC4.77□□□□□ -1.65
HLA-DRB4X5D2U9 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
HLA-DRB4X5D2U9 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HLA-DRB4X5D2U9 AC105749.1-201ENST00000631338 2008 ntBASIC4.77□□□□□ -1.65
HLA-DRB4X5D2U9 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HLA-DRB4X5D2U9 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC4.77□□□□□ -1.65
HLA-DRB4X5D2U9 AC217777.1-201ENST00000570034 1471 ntBASIC4.77□□□□□ -1.65
HLA-DRB4X5D2U9 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HLA-DRB4X5D2U9 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HLA-DRB4X5D2U9 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HLA-DRB4X5D2U9 SNORD16-201ENST00000362803 99 ntBASIC4.77□□□□□ -1.65
HLA-DRB4X5D2U9 FPGT-TNNI3K-201ENST00000370893 1195 ntTSL 2 BASIC4.77□□□□□ -1.65
HLA-DRB4X5D2U9 U3.23-201ENST00000391132 200 ntBASIC4.77□□□□□ -1.65
HLA-DRB4X5D2U9 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HLA-DRB4X5D2U9 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC4.77□□□□□ -1.65
HLA-DRB4X5D2U9 GPN3P1-201ENST00000423883 535 ntBASIC4.77□□□□□ -1.65
HLA-DRB4X5D2U9 AL356481.1-202ENST00000426704 970 ntTSL 2 BASIC4.77□□□□□ -1.65
HLA-DRB4X5D2U9 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC4.77□□□□□ -1.65
HLA-DRB4X5D2U9 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 127 ms