Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 AC096992.2-201ENST00000609553 1684 ntBASIC6.74□□□□□ -1.33
PCDHB1Q9Y5F3 OR10AB1P-202ENST00000641219 1686 ntBASIC6.74□□□□□ -1.33
PCDHB1Q9Y5F3 TMEM75-201ENST00000624314 2165 ntBASIC6.74□□□□□ -1.33
PCDHB1Q9Y5F3 KLHL5-204ENST00000504108 2690 ntTSL 2 BASIC6.73□□□□□ -1.33
PCDHB1Q9Y5F3 AC139426.3-201ENST00000605648 2059 ntBASIC6.73□□□□□ -1.33
PCDHB1Q9Y5F3 AADACL3-201ENST00000359318 3662 ntAPPRIS P1 TSL 3 BASIC6.73□□□□□ -1.33
PCDHB1Q9Y5F3 TATDN2P3-201ENST00000452855 3665 ntBASIC6.73□□□□□ -1.33
PCDHB1Q9Y5F3 AC217777.1-201ENST00000570034 1471 ntBASIC6.73□□□□□ -1.33
PCDHB1Q9Y5F3 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
PCDHB1Q9Y5F3 AC019270.1-201ENST00000523495 3488 ntTSL 5 BASIC6.73□□□□□ -1.33
PCDHB1Q9Y5F3 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
PCDHB1Q9Y5F3 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
PCDHB1Q9Y5F3 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
PCDHB1Q9Y5F3 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC6.73□□□□□ -1.33
PCDHB1Q9Y5F3 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC6.73□□□□□ -1.33
PCDHB1Q9Y5F3 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
PCDHB1Q9Y5F3 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC6.73□□□□□ -1.33
PCDHB1Q9Y5F3 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
PCDHB1Q9Y5F3 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
PCDHB1Q9Y5F3 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
PCDHB1Q9Y5F3 CHRM5-202ENST00000557872 2687 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
PCDHB1Q9Y5F3 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
PCDHB1Q9Y5F3 AC010894.1-201ENST00000313760 361 ntBASIC6.73□□□□□ -1.33
PCDHB1Q9Y5F3 RNU1-65P-201ENST00000363919 148 ntBASIC6.73□□□□□ -1.33
PCDHB1Q9Y5F3 RN7SKP269-201ENST00000365545 319 ntBASIC6.73□□□□□ -1.33
PCDHB1Q9Y5F3 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC6.73□□□□□ -1.33
PCDHB1Q9Y5F3 AL353692.2-201ENST00000407054 335 ntBASIC6.73□□□□□ -1.33
PCDHB1Q9Y5F3 MIR1282-201ENST00000408865 101 ntBASIC6.73□□□□□ -1.33
PCDHB1Q9Y5F3 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
PCDHB1Q9Y5F3 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC6.73□□□□□ -1.33
PCDHB1Q9Y5F3 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
PCDHB1Q9Y5F3 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC6.73□□□□□ -1.33
PCDHB1Q9Y5F3 AC245452.2-201ENST00000435222 392 ntBASIC6.73□□□□□ -1.33
PCDHB1Q9Y5F3 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC6.73□□□□□ -1.33
PCDHB1Q9Y5F3 MOB1AP2-201ENST00000446060 614 ntBASIC6.73□□□□□ -1.33
PCDHB1Q9Y5F3 AL121578.2-201ENST00000448797 447 ntBASIC6.73□□□□□ -1.33
PCDHB1Q9Y5F3 RPL7AP71-201ENST00000451120 739 ntBASIC6.73□□□□□ -1.33
PCDHB1Q9Y5F3 AC118758.1-202ENST00000454719 225 ntBASIC6.73□□□□□ -1.33
PCDHB1Q9Y5F3 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC6.73□□□□□ -1.33
PCDHB1Q9Y5F3 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC6.73□□□□□ -1.33
PCDHB1Q9Y5F3 AC015864.1-201ENST00000496512 544 ntBASIC6.73□□□□□ -1.33
PCDHB1Q9Y5F3 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC6.73□□□□□ -1.33
PCDHB1Q9Y5F3 AC103833.1-201ENST00000517442 172 ntBASIC6.73□□□□□ -1.33
PCDHB1Q9Y5F3 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC6.73□□□□□ -1.33
PCDHB1Q9Y5F3 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC6.73□□□□□ -1.33
PCDHB1Q9Y5F3 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC6.73□□□□□ -1.33
PCDHB1Q9Y5F3 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC6.73□□□□□ -1.33
PCDHB1Q9Y5F3 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC6.73□□□□□ -1.33
PCDHB1Q9Y5F3 NPM1P5-201ENST00000557228 838 ntBASIC6.73□□□□□ -1.33
PCDHB1Q9Y5F3 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC6.73□□□□□ -1.33
PCDHB1Q9Y5F3 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC6.73□□□□□ -1.33
PCDHB1Q9Y5F3 AC244034.2-201ENST00000562504 509 ntBASIC6.73□□□□□ -1.33
PCDHB1Q9Y5F3 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC6.73□□□□□ -1.33
PCDHB1Q9Y5F3 AC233266.2-201ENST00000567067 528 ntBASIC6.73□□□□□ -1.33
PCDHB1Q9Y5F3 AC004232.1-201ENST00000571388 208 ntBASIC6.73□□□□□ -1.33
PCDHB1Q9Y5F3 RN7SL270P-201ENST00000579643 281 ntBASIC6.73□□□□□ -1.33
PCDHB1Q9Y5F3 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC6.73□□□□□ -1.33
PCDHB1Q9Y5F3 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC6.73□□□□□ -1.33
PCDHB1Q9Y5F3 RPL7AP69-201ENST00000595306 806 ntBASIC6.73□□□□□ -1.33
PCDHB1Q9Y5F3 RPS11-205ENST00000599561 430 ntTSL 5 BASIC6.73□□□□□ -1.33
PCDHB1Q9Y5F3 AC096947.1-201ENST00000603233 470 ntBASIC6.73□□□□□ -1.33
PCDHB1Q9Y5F3 WBP1LP12-201ENST00000604449 331 ntBASIC6.73□□□□□ -1.33
PCDHB1Q9Y5F3 AL499605.1-201ENST00000604628 403 ntBASIC6.73□□□□□ -1.33
PCDHB1Q9Y5F3 OR51C1P-201ENST00000608504 942 ntBASIC6.73□□□□□ -1.33
PCDHB1Q9Y5F3 AC245389.2-201ENST00000616023 576 ntBASIC6.73□□□□□ -1.33
PCDHB1Q9Y5F3 MIR6778-201ENST00000617912 73 ntBASIC6.73□□□□□ -1.33
PCDHB1Q9Y5F3 AC242843.1-201ENST00000618702 573 ntBASIC6.73□□□□□ -1.33
PCDHB1Q9Y5F3 AC068213.1-201ENST00000625124 226 ntBASIC6.73□□□□□ -1.33
PCDHB1Q9Y5F3 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC6.73□□□□□ -1.33
PCDHB1Q9Y5F3 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC6.73□□□□□ -1.33
PCDHB1Q9Y5F3 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
PCDHB1Q9Y5F3 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
PCDHB1Q9Y5F3 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC6.73□□□□□ -1.33
PCDHB1Q9Y5F3 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
PCDHB1Q9Y5F3 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
PCDHB1Q9Y5F3 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
PCDHB1Q9Y5F3 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
PCDHB1Q9Y5F3 NARS2-204ENST00000528850 2137 ntTSL 5 BASIC6.73□□□□□ -1.33
PCDHB1Q9Y5F3 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
PCDHB1Q9Y5F3 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC6.73□□□□□ -1.33
PCDHB1Q9Y5F3 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
PCDHB1Q9Y5F3 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC6.72□□□□□ -1.33
PCDHB1Q9Y5F3 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
PCDHB1Q9Y5F3 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
PCDHB1Q9Y5F3 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC6.72□□□□□ -1.33
PCDHB1Q9Y5F3 MEF2C-254ENST00000637732 3347 ntTSL 5 BASIC6.72□□□□□ -1.33
PCDHB1Q9Y5F3 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
PCDHB1Q9Y5F3 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
PCDHB1Q9Y5F3 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC6.72□□□□□ -1.33
PCDHB1Q9Y5F3 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC6.72□□□□□ -1.33
PCDHB1Q9Y5F3 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
PCDHB1Q9Y5F3 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC6.72□□□□□ -1.33
PCDHB1Q9Y5F3 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
PCDHB1Q9Y5F3 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
PCDHB1Q9Y5F3 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
PCDHB1Q9Y5F3 SNORA70.3-201ENST00000365075 132 ntBASIC6.72□□□□□ -1.33
PCDHB1Q9Y5F3 RGS5-202ENST00000367903 934 ntTSL 3 BASIC6.72□□□□□ -1.33
PCDHB1Q9Y5F3 MIR323B-201ENST00000385269 82 ntBASIC6.72□□□□□ -1.33
PCDHB1Q9Y5F3 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
PCDHB1Q9Y5F3 MTATP6P31-201ENST00000406985 692 ntBASIC6.72□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms