Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 NCR3LG1-201ENST00000338965 6438 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
PCDHB11Q9Y5F2 ZNF512-203ENST00000413371 3703 ntTSL 2 BASIC7.92□□□□□ -1.14
PCDHB11Q9Y5F2 CCNC-204ENST00000482541 1704 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
PCDHB11Q9Y5F2 RNASEH2B-AS1-209ENST00000631080 1707 ntTSL 5 BASIC7.92□□□□□ -1.14
PCDHB11Q9Y5F2 AC089998.1-201ENST00000548575 3141 ntBASIC7.92□□□□□ -1.14
PCDHB11Q9Y5F2 C9orf131-205ENST00000421362 3259 ntAPPRIS ALT2 TSL 4 BASIC7.92□□□□□ -1.14
PCDHB11Q9Y5F2 INSIG2-201ENST00000245787 2590 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
PCDHB11Q9Y5F2 SLC9A6-214ENST00000637581 4872 ntTSL 5 BASIC7.92□□□□□ -1.14
PCDHB11Q9Y5F2 ZCCHC11-201ENST00000257177 5743 ntAPPRIS P4 TSL 1 (best) BASIC7.92□□□□□ -1.14
PCDHB11Q9Y5F2 SEC63P2-201ENST00000503863 1939 ntBASIC7.92□□□□□ -1.14
PCDHB11Q9Y5F2 WDHD1-202ENST00000420358 3722 ntTSL 5 BASIC7.92□□□□□ -1.14
PCDHB11Q9Y5F2 OCM-201ENST00000242104 695 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
PCDHB11Q9Y5F2 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC7.92□□□□□ -1.14
PCDHB11Q9Y5F2 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC7.92□□□□□ -1.14
PCDHB11Q9Y5F2 Y_RNA.450-201ENST00000384198 113 ntBASIC7.92□□□□□ -1.14
PCDHB11Q9Y5F2 RNA5SP256-201ENST00000390978 113 ntBASIC7.92□□□□□ -1.14
PCDHB11Q9Y5F2 AL138807.1-201ENST00000400354 459 ntBASIC7.92□□□□□ -1.14
PCDHB11Q9Y5F2 PROX1-AS1-201ENST00000413560 496 ntTSL 5 BASIC7.92□□□□□ -1.14
PCDHB11Q9Y5F2 AC090617.1-201ENST00000413674 323 ntTSL 2 BASIC7.92□□□□□ -1.14
PCDHB11Q9Y5F2 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC7.92□□□□□ -1.14
PCDHB11Q9Y5F2 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
PCDHB11Q9Y5F2 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC7.92□□□□□ -1.14
PCDHB11Q9Y5F2 AC233728.2-201ENST00000425348 757 ntBASIC7.92□□□□□ -1.14
PCDHB11Q9Y5F2 RBMY2JP-201ENST00000425544 1059 ntBASIC7.92□□□□□ -1.14
PCDHB11Q9Y5F2 EIF4A1P10-201ENST00000428832 1216 ntBASIC7.92□□□□□ -1.14
PCDHB11Q9Y5F2 Z68868.1-201ENST00000429048 544 ntBASIC7.92□□□□□ -1.14
PCDHB11Q9Y5F2 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
PCDHB11Q9Y5F2 FAM96AP1-201ENST00000430879 482 ntBASIC7.92□□□□□ -1.14
PCDHB11Q9Y5F2 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC7.92□□□□□ -1.14
PCDHB11Q9Y5F2 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC7.92□□□□□ -1.14
PCDHB11Q9Y5F2 AC009988.1-201ENST00000434988 310 ntTSL 5 BASIC7.92□□□□□ -1.14
PCDHB11Q9Y5F2 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
PCDHB11Q9Y5F2 TTC28-AS1-216ENST00000437713 854 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
PCDHB11Q9Y5F2 YWHAZP2-201ENST00000440317 728 ntBASIC7.92□□□□□ -1.14
PCDHB11Q9Y5F2 AC005002.1-201ENST00000447458 540 ntBASIC7.92□□□□□ -1.14
PCDHB11Q9Y5F2 Z99127.3-201ENST00000448158 395 ntBASIC7.92□□□□□ -1.14
PCDHB11Q9Y5F2 GAS5-219ENST00000449289 542 ntTSL 3 BASIC7.92□□□□□ -1.14
PCDHB11Q9Y5F2 AC007879.2-201ENST00000454444 551 ntTSL 4 BASIC7.92□□□□□ -1.14
PCDHB11Q9Y5F2 ARL4AP2-201ENST00000507378 601 ntBASIC7.92□□□□□ -1.14
PCDHB11Q9Y5F2 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC7.92□□□□□ -1.14
PCDHB11Q9Y5F2 PIGFP1-201ENST00000519180 653 ntBASIC7.92□□□□□ -1.14
PCDHB11Q9Y5F2 LINC01170-201ENST00000519703 406 ntTSL 5 BASIC7.92□□□□□ -1.14
PCDHB11Q9Y5F2 AC090707.1-201ENST00000528795 396 ntTSL 2 BASIC7.92□□□□□ -1.14
PCDHB11Q9Y5F2 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC7.92□□□□□ -1.14
PCDHB11Q9Y5F2 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC7.92□□□□□ -1.14
PCDHB11Q9Y5F2 LINC01588-211ENST00000556434 892 ntTSL 5 BASIC7.92□□□□□ -1.14
PCDHB11Q9Y5F2 OR4N2-203ENST00000557677 1008 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
PCDHB11Q9Y5F2 AL138976.2-201ENST00000563989 694 ntBASIC7.92□□□□□ -1.14
PCDHB11Q9Y5F2 FLJ21408-204ENST00000566854 601 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
PCDHB11Q9Y5F2 TBC1D29-201ENST00000579181 652 ntAPPRIS P2 TSL 1 (best) BASIC7.92□□□□□ -1.14
PCDHB11Q9Y5F2 AC018521.6-201ENST00000584276 335 ntTSL 5 BASIC7.92□□□□□ -1.14
PCDHB11Q9Y5F2 TBC1D29-204ENST00000584297 602 ntAPPRIS ALT2 TSL 1 (best) BASIC7.92□□□□□ -1.14
PCDHB11Q9Y5F2 AC114488.2-207ENST00000585660 700 ntTSL 5 BASIC7.92□□□□□ -1.14
PCDHB11Q9Y5F2 LINC00674-202ENST00000590734 160 ntBASIC7.92□□□□□ -1.14
PCDHB11Q9Y5F2 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC7.92□□□□□ -1.14
PCDHB11Q9Y5F2 VDAC1P5-201ENST00000603132 844 ntBASIC7.92□□□□□ -1.14
PCDHB11Q9Y5F2 AC012557.1-201ENST00000607115 611 ntBASIC7.92□□□□□ -1.14
PCDHB11Q9Y5F2 AC006238.1-201ENST00000609787 534 ntBASIC7.92□□□□□ -1.14
PCDHB11Q9Y5F2 RN7SL3-201ENST00000610674 299 ntBASIC7.92□□□□□ -1.14
PCDHB11Q9Y5F2 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
PCDHB11Q9Y5F2 AC011815.3-201ENST00000624194 473 ntBASIC7.92□□□□□ -1.14
PCDHB11Q9Y5F2 AC024023.1-201ENST00000624530 922 ntBASIC7.92□□□□□ -1.14
PCDHB11Q9Y5F2 FER-210ENST00000628534 558 ntTSL 5 BASIC7.92□□□□□ -1.14
PCDHB11Q9Y5F2 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC7.92□□□□□ -1.14
PCDHB11Q9Y5F2 AC022167.5-202ENST00000637237 701 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
PCDHB11Q9Y5F2 FAM157B-203ENST00000639350 358 ntBASIC7.92□□□□□ -1.14
PCDHB11Q9Y5F2 OR14J1-203ENST00000641895 6443 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
PCDHB11Q9Y5F2 NMD3-201ENST00000351193 3049 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
PCDHB11Q9Y5F2 AC006141.1-201ENST00000581917 2170 ntBASIC7.92□□□□□ -1.14
PCDHB11Q9Y5F2 LINC01205-201ENST00000489670 1331 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
PCDHB11Q9Y5F2 AL353753.1-201ENST00000612217 2320 ntTSL 2 BASIC7.92□□□□□ -1.14
PCDHB11Q9Y5F2 NHLRC3-201ENST00000379599 3275 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
PCDHB11Q9Y5F2 AC131971.1-201ENST00000332881 1482 ntBASIC7.92□□□□□ -1.14
PCDHB11Q9Y5F2 CAST-236ENST00000511782 2466 ntAPPRIS ALT2 TSL 2 BASIC7.92□□□□□ -1.14
PCDHB11Q9Y5F2 MAPK10-343ENST00000641677 2546 ntBASIC7.92□□□□□ -1.14
PCDHB11Q9Y5F2 AKR1C1-202ENST00000380872 6705 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
PCDHB11Q9Y5F2 AC017104.4-201ENST00000636283 1592 ntBASIC7.92□□□□□ -1.14
PCDHB11Q9Y5F2 KNG1-202ENST00000287611 1720 ntAPPRIS P3 TSL 1 (best) BASIC7.92□□□□□ -1.14
PCDHB11Q9Y5F2 KLHL8-202ENST00000425278 4049 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
PCDHB11Q9Y5F2 STON2-209ENST00000614646 2964 ntAPPRIS ALT2 TSL 5 BASIC7.92□□□□□ -1.14
PCDHB11Q9Y5F2 ABLIM3-202ENST00000326685 4164 ntTSL 5 BASIC7.92□□□□□ -1.14
PCDHB11Q9Y5F2 LINC02367-201ENST00000567749 4388 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
PCDHB11Q9Y5F2 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC7.92□□□□□ -1.14
PCDHB11Q9Y5F2 ABLIM3-207ENST00000508983 2011 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
PCDHB11Q9Y5F2 AURKA-201ENST00000312783 2223 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
PCDHB11Q9Y5F2 UBE2V1-204ENST00000371677 2459 ntTSL 2 BASIC7.91□□□□□ -1.14
PCDHB11Q9Y5F2 CD86-201ENST00000264468 2634 ntAPPRIS ALT2 TSL 5 BASIC7.91□□□□□ -1.14
PCDHB11Q9Y5F2 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
PCDHB11Q9Y5F2 OR2F1-203ENST00000641412 4829 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
PCDHB11Q9Y5F2 BRCA1-208ENST00000468300 3273 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
PCDHB11Q9Y5F2 TMEM182-203ENST00000412401 3593 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
PCDHB11Q9Y5F2 GLI1-201ENST00000228682 3613 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
PCDHB11Q9Y5F2 RNU6-660P-201ENST00000364566 109 ntBASIC7.91□□□□□ -1.14
PCDHB11Q9Y5F2 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC7.91□□□□□ -1.14
PCDHB11Q9Y5F2 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC7.91□□□□□ -1.14
PCDHB11Q9Y5F2 LSM5-202ENST00000409292 538 ntTSL 2 BASIC7.91□□□□□ -1.14
PCDHB11Q9Y5F2 AC003080.1-201ENST00000413552 767 ntBASIC7.91□□□□□ -1.14
PCDHB11Q9Y5F2 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
PCDHB11Q9Y5F2 AP000317.1-201ENST00000427022 805 ntTSL 3 BASIC7.91□□□□□ -1.14
PCDHB11Q9Y5F2 NPM1P24-201ENST00000428039 894 ntBASIC7.91□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms