Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 AC005277.2-201ENST00000617898 390 ntBASIC7.61□□□□□ -1.19
CTDP1Q9Y5B0 MIR6085-201ENST00000618314 110 ntBASIC7.61□□□□□ -1.19
CTDP1Q9Y5B0 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC7.61□□□□□ -1.19
CTDP1Q9Y5B0 AP000577.1-201ENST00000624366 878 ntBASIC7.61□□□□□ -1.19
CTDP1Q9Y5B0 AC021079.1-201ENST00000625268 907 ntTSL 3 BASIC7.61□□□□□ -1.19
CTDP1Q9Y5B0 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC7.61□□□□□ -1.19
CTDP1Q9Y5B0 MIR548A1HG-202ENST00000637804 784 ntTSL 5 BASIC7.61□□□□□ -1.19
CTDP1Q9Y5B0 CASC19-212ENST00000641153 1287 ntBASIC7.61□□□□□ -1.19
CTDP1Q9Y5B0 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC7.61□□□□□ -1.19
CTDP1Q9Y5B0 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC7.61□□□□□ -1.19
CTDP1Q9Y5B0 LINC01991-202ENST00000446091 1524 ntTSL 2 BASIC7.61□□□□□ -1.19
CTDP1Q9Y5B0 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC7.61□□□□□ -1.19
CTDP1Q9Y5B0 MAPK10-287ENST00000641217 3037 ntBASIC7.61□□□□□ -1.19
CTDP1Q9Y5B0 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC7.61□□□□□ -1.19
CTDP1Q9Y5B0 PPFIBP1-202ENST00000318304 6001 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CTDP1Q9Y5B0 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
CTDP1Q9Y5B0 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC7.61□□□□□ -1.19
CTDP1Q9Y5B0 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CTDP1Q9Y5B0 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC7.6□□□□□ -1.19
CTDP1Q9Y5B0 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CTDP1Q9Y5B0 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CTDP1Q9Y5B0 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
CTDP1Q9Y5B0 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
CTDP1Q9Y5B0 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
CTDP1Q9Y5B0 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CTDP1Q9Y5B0 CDH17-203ENST00000450165 2625 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CTDP1Q9Y5B0 AC004672.1-201ENST00000513082 2088 ntTSL 5 BASIC7.6□□□□□ -1.19
CTDP1Q9Y5B0 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC7.6□□□□□ -1.19
CTDP1Q9Y5B0 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC7.6□□□□□ -1.19
CTDP1Q9Y5B0 RPL12P13-201ENST00000310055 497 ntBASIC7.6□□□□□ -1.19
CTDP1Q9Y5B0 RNA5SP279-201ENST00000365513 117 ntBASIC7.6□□□□□ -1.19
CTDP1Q9Y5B0 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC7.6□□□□□ -1.19
CTDP1Q9Y5B0 RNA5SP115-201ENST00000411160 107 ntBASIC7.6□□□□□ -1.19
CTDP1Q9Y5B0 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CTDP1Q9Y5B0 AC002127.1-201ENST00000421305 225 ntBASIC7.6□□□□□ -1.19
CTDP1Q9Y5B0 RPL7AP14-201ENST00000424041 802 ntBASIC7.6□□□□□ -1.19
CTDP1Q9Y5B0 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC7.6□□□□□ -1.19
CTDP1Q9Y5B0 AC244033.1-201ENST00000426826 870 ntBASIC7.6□□□□□ -1.19
CTDP1Q9Y5B0 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC7.6□□□□□ -1.19
CTDP1Q9Y5B0 MORF4L1P5-201ENST00000433352 961 ntBASIC7.6□□□□□ -1.19
CTDP1Q9Y5B0 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC7.6□□□□□ -1.19
CTDP1Q9Y5B0 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC7.6□□□□□ -1.19
CTDP1Q9Y5B0 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC7.6□□□□□ -1.19
CTDP1Q9Y5B0 RAD1P2-201ENST00000446414 663 ntBASIC7.6□□□□□ -1.19
CTDP1Q9Y5B0 COX4I1P2-201ENST00000447446 547 ntBASIC7.6□□□□□ -1.19
CTDP1Q9Y5B0 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC7.6□□□□□ -1.19
CTDP1Q9Y5B0 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC7.6□□□□□ -1.19
CTDP1Q9Y5B0 PGBD4P1-201ENST00000473644 407 ntBASIC7.6□□□□□ -1.19
CTDP1Q9Y5B0 AC131392.1-201ENST00000506490 633 ntBASIC7.6□□□□□ -1.19
CTDP1Q9Y5B0 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC7.6□□□□□ -1.19
CTDP1Q9Y5B0 SMIM20-202ENST00000514384 774 ntTSL 5 BASIC7.6□□□□□ -1.19
CTDP1Q9Y5B0 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC7.6□□□□□ -1.19
CTDP1Q9Y5B0 RNU6-1334P-201ENST00000516032 105 ntBASIC7.6□□□□□ -1.19
CTDP1Q9Y5B0 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CTDP1Q9Y5B0 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC7.6□□□□□ -1.19
CTDP1Q9Y5B0 RPL41P2-201ENST00000544920 409 ntBASIC7.6□□□□□ -1.19
CTDP1Q9Y5B0 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC7.6□□□□□ -1.19
CTDP1Q9Y5B0 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
CTDP1Q9Y5B0 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC7.6□□□□□ -1.19
CTDP1Q9Y5B0 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC7.6□□□□□ -1.19
CTDP1Q9Y5B0 AC009303.3-201ENST00000591103 736 ntBASIC7.6□□□□□ -1.19
CTDP1Q9Y5B0 AC004805.3-201ENST00000603178 310 ntBASIC7.6□□□□□ -1.19
CTDP1Q9Y5B0 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC7.6□□□□□ -1.19
CTDP1Q9Y5B0 AL078581.3-201ENST00000627304 744 ntTSL 5 BASIC7.6□□□□□ -1.19
CTDP1Q9Y5B0 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC7.6□□□□□ -1.19
CTDP1Q9Y5B0 AC073488.9-201ENST00000631601 754 ntBASIC7.6□□□□□ -1.19
CTDP1Q9Y5B0 CASC19-243ENST00000641588 1546 ntBASIC7.6□□□□□ -1.19
CTDP1Q9Y5B0 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CTDP1Q9Y5B0 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
CTDP1Q9Y5B0 TMC5-206ENST00000561503 2487 ntTSL 2 BASIC7.6□□□□□ -1.19
CTDP1Q9Y5B0 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
CTDP1Q9Y5B0 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CTDP1Q9Y5B0 HBS1L-206ENST00000415177 2636 ntTSL 5 BASIC7.6□□□□□ -1.19
CTDP1Q9Y5B0 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC7.6□□□□□ -1.19
CTDP1Q9Y5B0 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
CTDP1Q9Y5B0 AC012078.1-201ENST00000405035 1646 ntBASIC7.6□□□□□ -1.19
CTDP1Q9Y5B0 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC7.59□□□□□ -1.19
CTDP1Q9Y5B0 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
CTDP1Q9Y5B0 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
CTDP1Q9Y5B0 MTCO1P25-201ENST00000414449 1799 ntBASIC7.59□□□□□ -1.19
CTDP1Q9Y5B0 AC022613.3-201ENST00000560740 1346 ntBASIC7.59□□□□□ -1.19
CTDP1Q9Y5B0 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC7.59□□□□□ -1.19
CTDP1Q9Y5B0 MPPED2-201ENST00000358117 2405 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
CTDP1Q9Y5B0 TLR10-204ENST00000506111 3462 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
CTDP1Q9Y5B0 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC7.59□□□□□ -1.19
CTDP1Q9Y5B0 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC7.59□□□□□ -1.19
CTDP1Q9Y5B0 TIA1-201ENST00000282574 3823 ntTSL 5 BASIC7.59□□□□□ -1.19
CTDP1Q9Y5B0 RPL11P4-201ENST00000332269 436 ntBASIC7.59□□□□□ -1.19
CTDP1Q9Y5B0 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
CTDP1Q9Y5B0 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
CTDP1Q9Y5B0 RBBP4P5-201ENST00000398583 1266 ntBASIC7.59□□□□□ -1.19
CTDP1Q9Y5B0 AC003045.1-201ENST00000398779 713 ntBASIC7.59□□□□□ -1.19
CTDP1Q9Y5B0 AL359092.1-201ENST00000417156 265 ntBASIC7.59□□□□□ -1.19
CTDP1Q9Y5B0 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC7.59□□□□□ -1.19
CTDP1Q9Y5B0 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC7.59□□□□□ -1.19
CTDP1Q9Y5B0 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC7.59□□□□□ -1.19
CTDP1Q9Y5B0 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC7.59□□□□□ -1.19
CTDP1Q9Y5B0 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC7.59□□□□□ -1.19
CTDP1Q9Y5B0 RN7SL362P-201ENST00000494228 267 ntBASIC7.59□□□□□ -1.19
CTDP1Q9Y5B0 GBA3-201ENST00000503442 1232 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms