Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 MIR4776-2-201ENST00000580204 80 ntBASIC9.15□□□□□ -0.95
SHANK2Q9UPX8 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC9.15□□□□□ -0.95
SHANK2Q9UPX8 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC9.15□□□□□ -0.95
SHANK2Q9UPX8 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
SHANK2Q9UPX8 AC022726.2-201ENST00000634673 547 ntBASIC9.15□□□□□ -0.95
SHANK2Q9UPX8 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
SHANK2Q9UPX8 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
SHANK2Q9UPX8 AC007342.5-201ENST00000571340 2142 ntBASIC9.14□□□□□ -0.95
SHANK2Q9UPX8 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
SHANK2Q9UPX8 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
SHANK2Q9UPX8 AC109780.1-201ENST00000451768 1344 ntBASIC9.14□□□□□ -0.95
SHANK2Q9UPX8 Z93929.1-201ENST00000418200 1475 ntBASIC9.14□□□□□ -0.95
SHANK2Q9UPX8 KIF1B-202ENST00000377081 8746 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
SHANK2Q9UPX8 GJB6-205ENST00000636852 1840 ntAPPRIS P1 TSL 4 BASIC9.14□□□□□ -0.95
SHANK2Q9UPX8 MBD5-201ENST00000404807 5920 ntTSL 5 BASIC9.14□□□□□ -0.95
SHANK2Q9UPX8 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
SHANK2Q9UPX8 MTHFD2P5-201ENST00000320415 844 ntBASIC9.14□□□□□ -0.95
SHANK2Q9UPX8 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
SHANK2Q9UPX8 RNA5SP478-201ENST00000364657 115 ntBASIC9.14□□□□□ -0.95
SHANK2Q9UPX8 RNA5SP132-201ENST00000364725 118 ntBASIC9.14□□□□□ -0.95
SHANK2Q9UPX8 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC9.14□□□□□ -0.95
SHANK2Q9UPX8 LINC02257-201ENST00000412445 605 ntTSL 2 BASIC9.14□□□□□ -0.95
SHANK2Q9UPX8 NMD3P2-201ENST00000421815 761 ntBASIC9.14□□□□□ -0.95
SHANK2Q9UPX8 BX323845.3-201ENST00000428215 527 ntBASIC9.14□□□□□ -0.95
SHANK2Q9UPX8 GAS5-218ENST00000448718 565 ntTSL 2 BASIC9.14□□□□□ -0.95
SHANK2Q9UPX8 AC023245.1-201ENST00000468501 517 ntBASIC9.14□□□□□ -0.95
SHANK2Q9UPX8 AC114728.1-201ENST00000488289 483 ntBASIC9.14□□□□□ -0.95
SHANK2Q9UPX8 KCTD9P4-201ENST00000526766 1166 ntBASIC9.14□□□□□ -0.95
SHANK2Q9UPX8 EIF4A2P5-201ENST00000529914 499 ntBASIC9.14□□□□□ -0.95
SHANK2Q9UPX8 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC9.14□□□□□ -0.95
SHANK2Q9UPX8 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC9.14□□□□□ -0.95
SHANK2Q9UPX8 AC003992.1-201ENST00000635364 557 ntBASIC9.14□□□□□ -0.95
SHANK2Q9UPX8 TP53BP1-203ENST00000382044 10384 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
SHANK2Q9UPX8 SH3D19-203ENST00000409598 5284 ntAPPRIS ALT1 TSL 1 (best) BASIC9.14□□□□□ -0.95
SHANK2Q9UPX8 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC9.14□□□□□ -0.95
SHANK2Q9UPX8 ERRFI1-202ENST00000467067 2097 ntTSL 2 BASIC9.14□□□□□ -0.95
SHANK2Q9UPX8 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
SHANK2Q9UPX8 KIF6-202ENST00000287152 9082 ntAPPRIS P1 TSL 2 BASIC9.13□□□□□ -0.95
SHANK2Q9UPX8 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC9.13□□□□□ -0.95
SHANK2Q9UPX8 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
SHANK2Q9UPX8 FOXJ3-205ENST00000372573 5309 ntAPPRIS P3 TSL 2 BASIC9.13□□□□□ -0.95
SHANK2Q9UPX8 RAB21-201ENST00000261263 15546 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
SHANK2Q9UPX8 KAT6A-203ENST00000406337 9241 ntAPPRIS P3 TSL 5 BASIC9.13□□□□□ -0.95
SHANK2Q9UPX8 SLC5A1-204ENST00000543737 4752 ntTSL 2 BASIC9.13□□□□□ -0.95
SHANK2Q9UPX8 RNU1-19P-201ENST00000363306 165 ntBASIC9.13□□□□□ -0.95
SHANK2Q9UPX8 RNU105B-201ENST00000364478 208 ntBASIC9.13□□□□□ -0.95
SHANK2Q9UPX8 MIR585-201ENST00000384887 94 ntBASIC9.13□□□□□ -0.95
SHANK2Q9UPX8 AC016739.1-201ENST00000405359 345 ntBASIC9.13□□□□□ -0.95
SHANK2Q9UPX8 RPS3AP2-201ENST00000407190 754 ntBASIC9.13□□□□□ -0.95
SHANK2Q9UPX8 AL096829.1-201ENST00000413677 457 ntBASIC9.13□□□□□ -0.95
SHANK2Q9UPX8 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC9.13□□□□□ -0.95
SHANK2Q9UPX8 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC9.13□□□□□ -0.95
SHANK2Q9UPX8 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC9.13□□□□□ -0.95
SHANK2Q9UPX8 AL021368.3-201ENST00000607119 578 ntBASIC9.13□□□□□ -0.95
SHANK2Q9UPX8 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC9.13□□□□□ -0.95
SHANK2Q9UPX8 AC019197.1-202ENST00000414885 2639 ntTSL 5 BASIC9.13□□□□□ -0.95
SHANK2Q9UPX8 GABRB3-216ENST00000628124 5581 ntTSL 2 BASIC9.13□□□□□ -0.95
SHANK2Q9UPX8 GRIN2A-202ENST00000396573 14450 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
SHANK2Q9UPX8 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC9.13□□□□□ -0.95
SHANK2Q9UPX8 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
SHANK2Q9UPX8 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
SHANK2Q9UPX8 DRP2-202ENST00000395209 7277 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
SHANK2Q9UPX8 SLC8A1-204ENST00000405269 2965 ntTSL 5 BASIC9.12□□□□□ -0.95
SHANK2Q9UPX8 DOCK2-211ENST00000520908 4654 ntTSL 2 BASIC9.12□□□□□ -0.95
SHANK2Q9UPX8 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
SHANK2Q9UPX8 SLC7A6-216ENST00000618043 6124 ntTSL 5 BASIC9.12□□□□□ -0.95
SHANK2Q9UPX8 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
SHANK2Q9UPX8 ZNF778-207ENST00000620195 11031 ntAPPRIS P3 TSL 2 BASIC9.12□□□□□ -0.95
SHANK2Q9UPX8 SETDB1-205ENST00000368969 4370 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
SHANK2Q9UPX8 AL358394.2-201ENST00000427229 3637 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
SHANK2Q9UPX8 ATG2B-202ENST00000359933 13684 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
SHANK2Q9UPX8 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
SHANK2Q9UPX8 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC9.12□□□□□ -0.95
SHANK2Q9UPX8 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC9.12□□□□□ -0.95
SHANK2Q9UPX8 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC9.12□□□□□ -0.95
SHANK2Q9UPX8 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
SHANK2Q9UPX8 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC9.12□□□□□ -0.95
SHANK2Q9UPX8 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC9.12□□□□□ -0.95
SHANK2Q9UPX8 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC9.12□□□□□ -0.95
SHANK2Q9UPX8 AC116667.2-201ENST00000641075 823 ntBASIC9.12□□□□□ -0.95
SHANK2Q9UPX8 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC9.12□□□□□ -0.95
SHANK2Q9UPX8 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
SHANK2Q9UPX8 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
SHANK2Q9UPX8 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
SHANK2Q9UPX8 LINC00261-202ENST00000564492 4912 ntTSL 3 BASIC9.12□□□□□ -0.95
SHANK2Q9UPX8 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC9.12□□□□□ -0.95
SHANK2Q9UPX8 AC024587.1-201ENST00000505925 2157 ntBASIC9.12□□□□□ -0.95
SHANK2Q9UPX8 KCNA2-214ENST00000640774 6673 ntTSL 5 BASIC9.12□□□□□ -0.95
SHANK2Q9UPX8 OFD1P17-201ENST00000437639 3018 ntBASIC9.12□□□□□ -0.95
SHANK2Q9UPX8 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
SHANK2Q9UPX8 CAST-204ENST00000341926 2487 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
SHANK2Q9UPX8 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC9.12□□□□□ -0.95
SHANK2Q9UPX8 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC9.11□□□□□ -0.95
SHANK2Q9UPX8 BRD8-202ENST00000254900 4388 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
SHANK2Q9UPX8 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
SHANK2Q9UPX8 ATP2B4-201ENST00000341360 4658 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
SHANK2Q9UPX8 TCF12-207ENST00000557843 4076 ntAPPRIS ALT1 TSL 1 (best) BASIC9.11□□□□□ -0.95
SHANK2Q9UPX8 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC9.11□□□□□ -0.95
SHANK2Q9UPX8 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC9.11□□□□□ -0.95
SHANK2Q9UPX8 AC092801.1-201ENST00000443763 581 ntTSL 3 BASIC9.11□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms