Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 AC016739.1-201ENST00000405359 345 ntBASIC7.8□□□□□ -1.16
SCN11AQ9UI33 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC7.8□□□□□ -1.16
SCN11AQ9UI33 BX119321.1-201ENST00000428912 797 ntBASIC7.8□□□□□ -1.16
SCN11AQ9UI33 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC7.8□□□□□ -1.16
SCN11AQ9UI33 ZNF462-204ENST00000441147 4691 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
SCN11AQ9UI33 GAPDHP71-201ENST00000511530 1003 ntBASIC7.8□□□□□ -1.16
SCN11AQ9UI33 AP004607.6-201ENST00000525033 1202 ntBASIC7.8□□□□□ -1.16
SCN11AQ9UI33 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC7.8□□□□□ -1.16
SCN11AQ9UI33 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC7.8□□□□□ -1.16
SCN11AQ9UI33 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC7.8□□□□□ -1.16
SCN11AQ9UI33 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC7.8□□□□□ -1.16
SCN11AQ9UI33 AC024255.1-201ENST00000614376 102 ntBASIC7.8□□□□□ -1.16
SCN11AQ9UI33 CGA-206ENST00000630630 832 ntTSL 2 BASIC7.8□□□□□ -1.16
SCN11AQ9UI33 ANO6-201ENST00000320560 5975 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
SCN11AQ9UI33 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
SCN11AQ9UI33 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
SCN11AQ9UI33 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
SCN11AQ9UI33 DCAF5-205ENST00000554215 4803 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
SCN11AQ9UI33 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
SCN11AQ9UI33 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC7.8□□□□□ -1.16
SCN11AQ9UI33 HSD17B13-201ENST00000302219 2269 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
SCN11AQ9UI33 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC7.8□□□□□ -1.16
SCN11AQ9UI33 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC7.8□□□□□ -1.16
SCN11AQ9UI33 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
SCN11AQ9UI33 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
SCN11AQ9UI33 AC016583.1-201ENST00000624221 2431 ntBASIC7.8□□□□□ -1.16
SCN11AQ9UI33 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
SCN11AQ9UI33 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC7.79□□□□□ -1.16
SCN11AQ9UI33 AC026316.3-201ENST00000497988 3097 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
SCN11AQ9UI33 OR2W4P-201ENST00000406496 926 ntBASIC7.79□□□□□ -1.16
SCN11AQ9UI33 AC002504.1-201ENST00000438281 691 ntBASIC7.79□□□□□ -1.16
SCN11AQ9UI33 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC7.79□□□□□ -1.16
SCN11AQ9UI33 EEF1B2P6-201ENST00000445713 673 ntBASIC7.79□□□□□ -1.16
SCN11AQ9UI33 AC073909.1-201ENST00000447112 999 ntBASIC7.79□□□□□ -1.16
SCN11AQ9UI33 AC026254.2-201ENST00000475295 371 ntBASIC7.79□□□□□ -1.16
SCN11AQ9UI33 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC7.79□□□□□ -1.16
SCN11AQ9UI33 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC7.79□□□□□ -1.16
SCN11AQ9UI33 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC7.79□□□□□ -1.16
SCN11AQ9UI33 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
SCN11AQ9UI33 SNORD95-201ENST00000579879 68 ntBASIC7.79□□□□□ -1.16
SCN11AQ9UI33 BNIP3P32-201ENST00000600015 554 ntBASIC7.79□□□□□ -1.16
SCN11AQ9UI33 ERG-205ENST00000398910 4954 ntTSL 5 BASIC7.79□□□□□ -1.16
SCN11AQ9UI33 KIF6-202ENST00000287152 9082 ntAPPRIS P1 TSL 2 BASIC7.79□□□□□ -1.16
SCN11AQ9UI33 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
SCN11AQ9UI33 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC7.79□□□□□ -1.16
SCN11AQ9UI33 KCNN3-201ENST00000271915 13033 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
SCN11AQ9UI33 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
SCN11AQ9UI33 NFIB-218ENST00000636432 1953 ntTSL 5 BASIC7.79□□□□□ -1.16
SCN11AQ9UI33 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC7.79□□□□□ -1.16
SCN11AQ9UI33 GAN-202ENST00000568107 15244 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
SCN11AQ9UI33 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
SCN11AQ9UI33 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC7.79□□□□□ -1.16
SCN11AQ9UI33 AL157831.2-201ENST00000564681 3095 ntBASIC7.79□□□□□ -1.16
SCN11AQ9UI33 SLC7A14-201ENST00000231706 10103 ntAPPRIS P1 TSL 2 BASIC7.79□□□□□ -1.16
SCN11AQ9UI33 AL161901.1-201ENST00000624954 3425 ntBASIC7.79□□□□□ -1.16
SCN11AQ9UI33 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC7.79□□□□□ -1.16
SCN11AQ9UI33 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC7.79□□□□□ -1.16
SCN11AQ9UI33 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC7.79□□□□□ -1.16
SCN11AQ9UI33 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
SCN11AQ9UI33 AL022237.1-201ENST00000446663 358 ntBASIC7.79□□□□□ -1.16
SCN11AQ9UI33 RPSAP37-201ENST00000470913 821 ntBASIC7.79□□□□□ -1.16
SCN11AQ9UI33 AP006245.2-201ENST00000522004 300 ntBASIC7.79□□□□□ -1.16
SCN11AQ9UI33 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC7.79□□□□□ -1.16
SCN11AQ9UI33 OR7E158P-201ENST00000524483 910 ntBASIC7.79□□□□□ -1.16
SCN11AQ9UI33 AC079600.1-201ENST00000550326 297 ntBASIC7.79□□□□□ -1.16
SCN11AQ9UI33 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC7.79□□□□□ -1.16
SCN11AQ9UI33 AC108449.2-201ENST00000560865 552 ntTSL 3 BASIC7.79□□□□□ -1.16
SCN11AQ9UI33 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC7.79□□□□□ -1.16
SCN11AQ9UI33 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC7.79□□□□□ -1.16
SCN11AQ9UI33 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC7.79□□□□□ -1.16
SCN11AQ9UI33 AC104695.2-201ENST00000605056 775 ntBASIC7.79□□□□□ -1.16
SCN11AQ9UI33 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC7.79□□□□□ -1.16
SCN11AQ9UI33 RN7SL787P-201ENST00000613000 284 ntBASIC7.79□□□□□ -1.16
SCN11AQ9UI33 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
SCN11AQ9UI33 ANGEL2-201ENST00000360506 4323 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
SCN11AQ9UI33 PGAP1-201ENST00000354764 11114 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
SCN11AQ9UI33 SECISBP2L-209ENST00000559471 7176 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
SCN11AQ9UI33 POC1B-AS1-201ENST00000605233 8041 ntTSL 2 BASIC7.78□□□□□ -1.16
SCN11AQ9UI33 ZNF229-204ENST00000614049 4507 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
SCN11AQ9UI33 ZNF23-204ENST00000428724 1932 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
SCN11AQ9UI33 SHQ1P1-201ENST00000437111 1544 ntBASIC7.78□□□□□ -1.16
SCN11AQ9UI33 CCNT2P1-201ENST00000423082 1315 ntBASIC7.78□□□□□ -1.16
SCN11AQ9UI33 LIPG-201ENST00000261292 10441 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
SCN11AQ9UI33 FREM1-204ENST00000422223 10086 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
SCN11AQ9UI33 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
SCN11AQ9UI33 ADAM20P1-202ENST00000556964 3034 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
SCN11AQ9UI33 LIMD1-201ENST00000273317 11331 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
SCN11AQ9UI33 FAM168A-201ENST00000064778 7296 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
SCN11AQ9UI33 PLEKHA5-201ENST00000299275 4238 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
SCN11AQ9UI33 FO393409.1-201ENST00000399325 1372 ntBASIC7.78□□□□□ -1.16
SCN11AQ9UI33 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
SCN11AQ9UI33 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
SCN11AQ9UI33 AL391422.1-201ENST00000402155 436 ntBASIC7.78□□□□□ -1.16
SCN11AQ9UI33 RN7SKP293-201ENST00000411389 296 ntBASIC7.78□□□□□ -1.16
SCN11AQ9UI33 DNAJC19P5-201ENST00000443295 316 ntBASIC7.78□□□□□ -1.16
SCN11AQ9UI33 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC7.78□□□□□ -1.16
SCN11AQ9UI33 AC112187.1-201ENST00000455837 479 ntBASIC7.78□□□□□ -1.16
SCN11AQ9UI33 AC068522.1-201ENST00000482895 345 ntBASIC7.78□□□□□ -1.16
SCN11AQ9UI33 CASP5-209ENST00000531367 879 ntTSL 5 BASIC7.78□□□□□ -1.16
SCN11AQ9UI33 PCNAP4-201ENST00000532690 730 ntBASIC7.78□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms