Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
NPC1L1Q9UHC9 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC8.31□□□□□ -1.08
NPC1L1Q9UHC9 NCR3LG1-201ENST00000338965 6438 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
NPC1L1Q9UHC9 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
NPC1L1Q9UHC9 ITPR1-204ENST00000443694 9513 ntAPPRIS ALT1 TSL 1 (best) BASIC8.31□□□□□ -1.08
NPC1L1Q9UHC9 AC016583.1-201ENST00000624221 2431 ntBASIC8.31□□□□□ -1.08
NPC1L1Q9UHC9 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC8.31□□□□□ -1.08
NPC1L1Q9UHC9 MEIS1-209ENST00000488550 5111 ntAPPRIS ALT1 TSL 1 (best) BASIC8.31□□□□□ -1.08
NPC1L1Q9UHC9 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
NPC1L1Q9UHC9 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC8.31□□□□□ -1.08
NPC1L1Q9UHC9 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
NPC1L1Q9UHC9 RN7SKP275-201ENST00000364626 301 ntBASIC8.31□□□□□ -1.08
NPC1L1Q9UHC9 RN7SKP166-201ENST00000410812 305 ntBASIC8.31□□□□□ -1.08
NPC1L1Q9UHC9 AC245096.1-201ENST00000413104 546 ntBASIC8.31□□□□□ -1.08
NPC1L1Q9UHC9 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC8.31□□□□□ -1.08
NPC1L1Q9UHC9 RPL7AP14-201ENST00000424041 802 ntBASIC8.31□□□□□ -1.08
NPC1L1Q9UHC9 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC8.31□□□□□ -1.08
NPC1L1Q9UHC9 FTLP8-201ENST00000446770 267 ntBASIC8.31□□□□□ -1.08
NPC1L1Q9UHC9 PPIAP27-201ENST00000453800 265 ntBASIC8.31□□□□□ -1.08
NPC1L1Q9UHC9 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC8.31□□□□□ -1.08
NPC1L1Q9UHC9 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC8.31□□□□□ -1.08
NPC1L1Q9UHC9 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC8.31□□□□□ -1.08
NPC1L1Q9UHC9 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC8.31□□□□□ -1.08
NPC1L1Q9UHC9 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC8.31□□□□□ -1.08
NPC1L1Q9UHC9 AC024884.1-201ENST00000620583 399 ntBASIC8.31□□□□□ -1.08
NPC1L1Q9UHC9 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
NPC1L1Q9UHC9 AC110716.2-201ENST00000563865 3945 ntBASIC8.31□□□□□ -1.08
NPC1L1Q9UHC9 TENM4-201ENST00000278550 14000 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
NPC1L1Q9UHC9 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
NPC1L1Q9UHC9 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
NPC1L1Q9UHC9 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
NPC1L1Q9UHC9 DPY19L1P1-201ENST00000417811 2594 ntBASIC8.31□□□□□ -1.08
NPC1L1Q9UHC9 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
NPC1L1Q9UHC9 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
NPC1L1Q9UHC9 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC8.3□□□□□ -1.08
NPC1L1Q9UHC9 ZYG11B-201ENST00000294353 8093 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
NPC1L1Q9UHC9 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC8.3□□□□□ -1.08
NPC1L1Q9UHC9 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
NPC1L1Q9UHC9 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
NPC1L1Q9UHC9 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
NPC1L1Q9UHC9 AC024587.1-201ENST00000505925 2157 ntBASIC8.3□□□□□ -1.08
NPC1L1Q9UHC9 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC8.3□□□□□ -1.08
NPC1L1Q9UHC9 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
NPC1L1Q9UHC9 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
NPC1L1Q9UHC9 CCDC93-201ENST00000319432 6896 ntAPPRIS ALT1 TSL 5 BASIC8.3□□□□□ -1.08
NPC1L1Q9UHC9 CCDC93-202ENST00000376300 6899 ntAPPRIS P2 TSL 1 (best) BASIC8.3□□□□□ -1.08
NPC1L1Q9UHC9 AL451046.1-201ENST00000406097 534 ntBASIC8.3□□□□□ -1.08
NPC1L1Q9UHC9 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC8.3□□□□□ -1.08
NPC1L1Q9UHC9 RN7SKP151-201ENST00000410230 316 ntBASIC8.3□□□□□ -1.08
NPC1L1Q9UHC9 RPL35AP3-201ENST00000414680 288 ntBASIC8.3□□□□□ -1.08
NPC1L1Q9UHC9 GAPDHP75-201ENST00000433910 943 ntBASIC8.3□□□□□ -1.08
NPC1L1Q9UHC9 ZNF619P1-201ENST00000446539 752 ntBASIC8.3□□□□□ -1.08
NPC1L1Q9UHC9 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC8.3□□□□□ -1.08
NPC1L1Q9UHC9 PFN2-209ENST00000481275 560 ntTSL 4 BASIC8.3□□□□□ -1.08
NPC1L1Q9UHC9 AL158068.1-201ENST00000506116 616 ntBASIC8.3□□□□□ -1.08
NPC1L1Q9UHC9 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC8.3□□□□□ -1.08
NPC1L1Q9UHC9 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC8.3□□□□□ -1.08
NPC1L1Q9UHC9 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC8.3□□□□□ -1.08
NPC1L1Q9UHC9 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC8.3□□□□□ -1.08
NPC1L1Q9UHC9 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC8.3□□□□□ -1.08
NPC1L1Q9UHC9 AC116667.2-201ENST00000641075 823 ntBASIC8.3□□□□□ -1.08
NPC1L1Q9UHC9 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
NPC1L1Q9UHC9 ENTPD1-205ENST00000453258 5044 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
NPC1L1Q9UHC9 POT1-202ENST00000393329 3950 ntTSL 5 BASIC8.3□□□□□ -1.08
NPC1L1Q9UHC9 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC8.3□□□□□ -1.08
NPC1L1Q9UHC9 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
NPC1L1Q9UHC9 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
NPC1L1Q9UHC9 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
NPC1L1Q9UHC9 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
NPC1L1Q9UHC9 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
NPC1L1Q9UHC9 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
NPC1L1Q9UHC9 YOD1-202ENST00000367084 6291 ntTSL 2 BASIC8.29□□□□□ -1.08
NPC1L1Q9UHC9 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
NPC1L1Q9UHC9 ADGRL3-204ENST00000506720 4962 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
NPC1L1Q9UHC9 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC8.29□□□□□ -1.08
NPC1L1Q9UHC9 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC8.29□□□□□ -1.08
NPC1L1Q9UHC9 PAK5-201ENST00000353224 4500 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
NPC1L1Q9UHC9 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC8.29□□□□□ -1.08
NPC1L1Q9UHC9 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC8.29□□□□□ -1.08
NPC1L1Q9UHC9 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
NPC1L1Q9UHC9 RNA5SP435-201ENST00000364044 108 ntBASIC8.29□□□□□ -1.08
NPC1L1Q9UHC9 CRP-204ENST00000368112 787 ntTSL 2 BASIC8.29□□□□□ -1.08
NPC1L1Q9UHC9 AL096829.1-201ENST00000413677 457 ntBASIC8.29□□□□□ -1.08
NPC1L1Q9UHC9 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC8.29□□□□□ -1.08
NPC1L1Q9UHC9 ATP6V1E1P1-201ENST00000439215 681 ntBASIC8.29□□□□□ -1.08
NPC1L1Q9UHC9 CFL1P4-201ENST00000451536 498 ntBASIC8.29□□□□□ -1.08
NPC1L1Q9UHC9 AC009963.3-201ENST00000458090 486 ntBASIC8.29□□□□□ -1.08
NPC1L1Q9UHC9 FTH1P8-201ENST00000498161 514 ntBASIC8.29□□□□□ -1.08
NPC1L1Q9UHC9 RBBP4P1-201ENST00000502424 1276 ntBASIC8.29□□□□□ -1.08
NPC1L1Q9UHC9 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC8.29□□□□□ -1.08
NPC1L1Q9UHC9 CYCSP38-201ENST00000559840 322 ntBASIC8.29□□□□□ -1.08
NPC1L1Q9UHC9 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC8.29□□□□□ -1.08
NPC1L1Q9UHC9 AL645933.2-201ENST00000606743 1207 ntBASIC8.29□□□□□ -1.08
NPC1L1Q9UHC9 MIR6809-201ENST00000612189 116 ntBASIC8.29□□□□□ -1.08
NPC1L1Q9UHC9 AL355974.3-201ENST00000617383 467 ntBASIC8.29□□□□□ -1.08
NPC1L1Q9UHC9 AC087269.2-201ENST00000641764 975 ntBASIC8.29□□□□□ -1.08
NPC1L1Q9UHC9 AC008691.1-209ENST00000642094 814 ntBASIC8.29□□□□□ -1.08
NPC1L1Q9UHC9 AP003486.1-201ENST00000525716 3994 ntBASIC8.29□□□□□ -1.08
NPC1L1Q9UHC9 ADAMTS9-201ENST00000295903 7060 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
NPC1L1Q9UHC9 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC8.29□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms