Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
CLCF1Q9UBD9 RN7SKP240-201ENST00000410583 375 ntBASIC5.62□□□□□ -1.51
CLCF1Q9UBD9 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC5.62□□□□□ -1.51
CLCF1Q9UBD9 ATP5A1P8-201ENST00000423669 1291 ntBASIC5.62□□□□□ -1.51
CLCF1Q9UBD9 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC5.62□□□□□ -1.51
CLCF1Q9UBD9 RPS7P14-201ENST00000426405 583 ntBASIC5.62□□□□□ -1.51
CLCF1Q9UBD9 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC5.62□□□□□ -1.51
CLCF1Q9UBD9 AC069154.1-201ENST00000432914 542 ntBASIC5.62□□□□□ -1.51
CLCF1Q9UBD9 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC5.62□□□□□ -1.51
CLCF1Q9UBD9 PNKDP1-201ENST00000435914 430 ntBASIC5.62□□□□□ -1.51
CLCF1Q9UBD9 AC011742.2-201ENST00000443818 352 ntBASIC5.62□□□□□ -1.51
CLCF1Q9UBD9 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC5.62□□□□□ -1.51
CLCF1Q9UBD9 AC097463.1-201ENST00000447288 481 ntBASIC5.62□□□□□ -1.51
CLCF1Q9UBD9 VN1R38P-201ENST00000450265 887 ntBASIC5.62□□□□□ -1.51
CLCF1Q9UBD9 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC5.62□□□□□ -1.51
CLCF1Q9UBD9 MTND6P8-201ENST00000503471 522 ntBASIC5.62□□□□□ -1.51
CLCF1Q9UBD9 OR7E99P-201ENST00000505750 922 ntBASIC5.62□□□□□ -1.51
CLCF1Q9UBD9 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC5.62□□□□□ -1.51
CLCF1Q9UBD9 AC009879.1-201ENST00000520029 839 ntBASIC5.62□□□□□ -1.51
CLCF1Q9UBD9 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC5.62□□□□□ -1.51
CLCF1Q9UBD9 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC5.62□□□□□ -1.51
CLCF1Q9UBD9 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC5.62□□□□□ -1.51
CLCF1Q9UBD9 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC5.62□□□□□ -1.51
CLCF1Q9UBD9 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC5.62□□□□□ -1.51
CLCF1Q9UBD9 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CLCF1Q9UBD9 AL121579.2-201ENST00000555466 590 ntBASIC5.62□□□□□ -1.51
CLCF1Q9UBD9 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC5.62□□□□□ -1.51
CLCF1Q9UBD9 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC5.62□□□□□ -1.51
CLCF1Q9UBD9 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC5.62□□□□□ -1.51
CLCF1Q9UBD9 PLEKHA3P1-201ENST00000598554 894 ntBASIC5.62□□□□□ -1.51
CLCF1Q9UBD9 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC5.62□□□□□ -1.51
CLCF1Q9UBD9 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC5.62□□□□□ -1.51
CLCF1Q9UBD9 AC073389.3-201ENST00000609434 935 ntBASIC5.62□□□□□ -1.51
CLCF1Q9UBD9 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC5.62□□□□□ -1.51
CLCF1Q9UBD9 AL589935.2-201ENST00000616471 1231 ntBASIC5.62□□□□□ -1.51
CLCF1Q9UBD9 MIR6778-201ENST00000617912 73 ntBASIC5.62□□□□□ -1.51
CLCF1Q9UBD9 AC025262.3-201ENST00000623666 360 ntBASIC5.62□□□□□ -1.51
CLCF1Q9UBD9 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
CLCF1Q9UBD9 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CLCF1Q9UBD9 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CLCF1Q9UBD9 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC5.62□□□□□ -1.51
CLCF1Q9UBD9 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CLCF1Q9UBD9 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC5.62□□□□□ -1.51
CLCF1Q9UBD9 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CLCF1Q9UBD9 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CLCF1Q9UBD9 AP002370.1-201ENST00000528055 1602 ntBASIC5.62□□□□□ -1.51
CLCF1Q9UBD9 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CLCF1Q9UBD9 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CLCF1Q9UBD9 WBP11P1-201ENST00000562560 1931 ntBASIC5.62□□□□□ -1.51
CLCF1Q9UBD9 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC5.62□□□□□ -1.51
CLCF1Q9UBD9 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
CLCF1Q9UBD9 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CLCF1Q9UBD9 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CLCF1Q9UBD9 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.61□□□□□ -1.51
CLCF1Q9UBD9 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC5.61□□□□□ -1.51
CLCF1Q9UBD9 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
CLCF1Q9UBD9 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC5.61□□□□□ -1.51
CLCF1Q9UBD9 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CLCF1Q9UBD9 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
CLCF1Q9UBD9 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC5.61□□□□□ -1.51
CLCF1Q9UBD9 ZNF705B-201ENST00000400120 1207 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
CLCF1Q9UBD9 CSNK2A1-204ENST00000400227 1499 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CLCF1Q9UBD9 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC5.61□□□□□ -1.51
CLCF1Q9UBD9 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
CLCF1Q9UBD9 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CLCF1Q9UBD9 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC5.61□□□□□ -1.51
CLCF1Q9UBD9 AL356481.1-202ENST00000426704 970 ntTSL 2 BASIC5.61□□□□□ -1.51
CLCF1Q9UBD9 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC5.61□□□□□ -1.51
CLCF1Q9UBD9 HIGD1AP16-201ENST00000450986 258 ntBASIC5.61□□□□□ -1.51
CLCF1Q9UBD9 AC044784.1-201ENST00000456526 677 ntTSL 3 BASIC5.61□□□□□ -1.51
CLCF1Q9UBD9 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC5.61□□□□□ -1.51
CLCF1Q9UBD9 AC115223.1-201ENST00000466377 870 ntBASIC5.61□□□□□ -1.51
CLCF1Q9UBD9 AC010343.2-201ENST00000510162 224 ntBASIC5.61□□□□□ -1.51
CLCF1Q9UBD9 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC5.61□□□□□ -1.51
CLCF1Q9UBD9 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC5.61□□□□□ -1.51
CLCF1Q9UBD9 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC5.61□□□□□ -1.51
CLCF1Q9UBD9 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC5.61□□□□□ -1.51
CLCF1Q9UBD9 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC5.61□□□□□ -1.51
CLCF1Q9UBD9 AC009120.3-201ENST00000563335 499 ntBASIC5.61□□□□□ -1.51
CLCF1Q9UBD9 MRPS21P8-201ENST00000569196 235 ntBASIC5.61□□□□□ -1.51
CLCF1Q9UBD9 AC233702.7-202ENST00000582941 211 ntBASIC5.61□□□□□ -1.51
CLCF1Q9UBD9 AC027575.3-201ENST00000583058 2747 ntBASIC5.61□□□□□ -1.51
CLCF1Q9UBD9 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC5.61□□□□□ -1.51
CLCF1Q9UBD9 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC5.61□□□□□ -1.51
CLCF1Q9UBD9 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC5.61□□□□□ -1.51
CLCF1Q9UBD9 DYNLL1P1-201ENST00000595442 269 ntBASIC5.61□□□□□ -1.51
CLCF1Q9UBD9 AP001437.1-201ENST00000608783 456 ntBASIC5.61□□□□□ -1.51
CLCF1Q9UBD9 AC010998.3-201ENST00000613871 631 ntBASIC5.61□□□□□ -1.51
CLCF1Q9UBD9 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
CLCF1Q9UBD9 AC105235.1-201ENST00000623208 1816 ntBASIC5.61□□□□□ -1.51
CLCF1Q9UBD9 AC012254.5-201ENST00000623573 478 ntBASIC5.61□□□□□ -1.51
CLCF1Q9UBD9 AC008957.3-201ENST00000624112 2242 ntBASIC5.61□□□□□ -1.51
CLCF1Q9UBD9 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
CLCF1Q9UBD9 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC5.61□□□□□ -1.51
CLCF1Q9UBD9 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC5.61□□□□□ -1.51
CLCF1Q9UBD9 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
CLCF1Q9UBD9 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
CLCF1Q9UBD9 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CLCF1Q9UBD9 ZNF91-202ENST00000397082 3572 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
CLCF1Q9UBD9 AC018765.1-201ENST00000623357 3446 ntBASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms