Protein–RNA interactions for Protein: Q9NSA3

CTNNBIP1, Beta-catenin-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNBIP1Q9NSA3 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CTNNBIP1Q9NSA3 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC5.08□□□□□ -1.6
CTNNBIP1Q9NSA3 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CTNNBIP1Q9NSA3 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
CTNNBIP1Q9NSA3 UGT2B24P-201ENST00000514441 1597 ntBASIC5.08□□□□□ -1.6
CTNNBIP1Q9NSA3 AL592429.1-201ENST00000403909 1473 ntBASIC5.08□□□□□ -1.6
CTNNBIP1Q9NSA3 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC5.08□□□□□ -1.6
CTNNBIP1Q9NSA3 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
CTNNBIP1Q9NSA3 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.08□□□□□ -1.6
CTNNBIP1Q9NSA3 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC5.08□□□□□ -1.6
CTNNBIP1Q9NSA3 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CTNNBIP1Q9NSA3 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CTNNBIP1Q9NSA3 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC5.08□□□□□ -1.6
CTNNBIP1Q9NSA3 AP001541.1-201ENST00000623322 1904 ntBASIC5.08□□□□□ -1.6
CTNNBIP1Q9NSA3 RN7SKP281-201ENST00000410472 352 ntBASIC5.08□□□□□ -1.6
CTNNBIP1Q9NSA3 CYTOR-207ENST00000414584 772 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CTNNBIP1Q9NSA3 AL365220.1-201ENST00000432923 399 ntBASIC5.08□□□□□ -1.6
CTNNBIP1Q9NSA3 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC5.08□□□□□ -1.6
CTNNBIP1Q9NSA3 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC5.08□□□□□ -1.6
CTNNBIP1Q9NSA3 SNRPCP3-201ENST00000474888 476 ntBASIC5.08□□□□□ -1.6
CTNNBIP1Q9NSA3 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC5.08□□□□□ -1.6
CTNNBIP1Q9NSA3 RPL10P7-201ENST00000495649 625 ntBASIC5.08□□□□□ -1.6
CTNNBIP1Q9NSA3 ENPP7P3-201ENST00000509123 241 ntBASIC5.08□□□□□ -1.6
CTNNBIP1Q9NSA3 AC008443.6-204ENST00000511517 738 ntTSL 2 BASIC5.08□□□□□ -1.6
CTNNBIP1Q9NSA3 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC5.08□□□□□ -1.6
CTNNBIP1Q9NSA3 AC114940.1-201ENST00000512162 1265 ntBASIC5.08□□□□□ -1.6
CTNNBIP1Q9NSA3 LINC01262-201ENST00000513681 879 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CTNNBIP1Q9NSA3 AP001107.4-201ENST00000533576 539 ntTSL 3 BASIC5.08□□□□□ -1.6
CTNNBIP1Q9NSA3 AC069234.3-201ENST00000544939 569 ntTSL 4 BASIC5.08□□□□□ -1.6
CTNNBIP1Q9NSA3 HNRNPA1P74-201ENST00000560782 835 ntBASIC5.08□□□□□ -1.6
CTNNBIP1Q9NSA3 DCTN5-204ENST00000563998 878 ntTSL 3 BASIC5.08□□□□□ -1.6
CTNNBIP1Q9NSA3 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC5.08□□□□□ -1.6
CTNNBIP1Q9NSA3 AC092718.4-201ENST00000566639 716 ntBASIC5.08□□□□□ -1.6
CTNNBIP1Q9NSA3 AC010761.3-201ENST00000578819 499 ntTSL 3 BASIC5.08□□□□□ -1.6
CTNNBIP1Q9NSA3 MIR4312-201ENST00000579909 76 ntBASIC5.08□□□□□ -1.6
CTNNBIP1Q9NSA3 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC5.08□□□□□ -1.6
CTNNBIP1Q9NSA3 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CTNNBIP1Q9NSA3 ZEB2-AS1-206ENST00000602006 572 ntTSL 5 BASIC5.08□□□□□ -1.6
CTNNBIP1Q9NSA3 AC114477.1-201ENST00000605097 605 ntBASIC5.08□□□□□ -1.6
CTNNBIP1Q9NSA3 STARD13-AS-224ENST00000608496 787 ntTSL 5 BASIC5.08□□□□□ -1.6
CTNNBIP1Q9NSA3 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC5.08□□□□□ -1.6
CTNNBIP1Q9NSA3 MIR7159-201ENST00000620587 66 ntBASIC5.08□□□□□ -1.6
CTNNBIP1Q9NSA3 AC027559.1-201ENST00000636288 271 ntBASIC5.08□□□□□ -1.6
CTNNBIP1Q9NSA3 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CTNNBIP1Q9NSA3 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
CTNNBIP1Q9NSA3 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CTNNBIP1Q9NSA3 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.08□□□□□ -1.6
CTNNBIP1Q9NSA3 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CTNNBIP1Q9NSA3 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CTNNBIP1Q9NSA3 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.08□□□□□ -1.6
CTNNBIP1Q9NSA3 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
CTNNBIP1Q9NSA3 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CTNNBIP1Q9NSA3 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
CTNNBIP1Q9NSA3 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC5.08□□□□□ -1.6
CTNNBIP1Q9NSA3 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.08□□□□□ -1.6
CTNNBIP1Q9NSA3 AC022164.1-201ENST00000568767 2673 ntBASIC5.08□□□□□ -1.6
CTNNBIP1Q9NSA3 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CTNNBIP1Q9NSA3 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CTNNBIP1Q9NSA3 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.07□□□□□ -1.6
CTNNBIP1Q9NSA3 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CTNNBIP1Q9NSA3 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CTNNBIP1Q9NSA3 AL353743.3-201ENST00000442109 1468 ntBASIC5.07□□□□□ -1.6
CTNNBIP1Q9NSA3 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CTNNBIP1Q9NSA3 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.07□□□□□ -1.6
CTNNBIP1Q9NSA3 AC092724.1-201ENST00000624623 3397 ntBASIC5.07□□□□□ -1.6
CTNNBIP1Q9NSA3 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CTNNBIP1Q9NSA3 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CTNNBIP1Q9NSA3 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CTNNBIP1Q9NSA3 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.07□□□□□ -1.6
CTNNBIP1Q9NSA3 HDAC1P2-201ENST00000453661 1398 ntBASIC5.07□□□□□ -1.6
CTNNBIP1Q9NSA3 AC010132.4-201ENST00000569883 1368 ntBASIC5.07□□□□□ -1.6
CTNNBIP1Q9NSA3 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC5.07□□□□□ -1.6
CTNNBIP1Q9NSA3 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.07□□□□□ -1.6
CTNNBIP1Q9NSA3 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
CTNNBIP1Q9NSA3 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CTNNBIP1Q9NSA3 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
CTNNBIP1Q9NSA3 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CTNNBIP1Q9NSA3 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC5.07□□□□□ -1.6
CTNNBIP1Q9NSA3 AL359091.1-201ENST00000449048 1734 ntBASIC5.07□□□□□ -1.6
CTNNBIP1Q9NSA3 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC5.07□□□□□ -1.6
CTNNBIP1Q9NSA3 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CTNNBIP1Q9NSA3 ENSA-207ENST00000362052 703 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CTNNBIP1Q9NSA3 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC5.07□□□□□ -1.6
CTNNBIP1Q9NSA3 U3.52-201ENST00000384034 216 ntBASIC5.07□□□□□ -1.6
CTNNBIP1Q9NSA3 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CTNNBIP1Q9NSA3 AC024937.2-201ENST00000411669 1242 ntBASIC5.07□□□□□ -1.6
CTNNBIP1Q9NSA3 AC015977.1-201ENST00000418887 292 ntBASIC5.07□□□□□ -1.6
CTNNBIP1Q9NSA3 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC5.07□□□□□ -1.6
CTNNBIP1Q9NSA3 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CTNNBIP1Q9NSA3 OR52S1P-201ENST00000427016 937 ntBASIC5.07□□□□□ -1.6
CTNNBIP1Q9NSA3 CENPN-204ENST00000428963 971 ntTSL 2 BASIC5.07□□□□□ -1.6
CTNNBIP1Q9NSA3 LINC01762-205ENST00000437308 539 ntTSL 3 BASIC5.07□□□□□ -1.6
CTNNBIP1Q9NSA3 AL353803.3-201ENST00000444641 335 ntBASIC5.07□□□□□ -1.6
CTNNBIP1Q9NSA3 RAB28P2-201ENST00000454299 641 ntBASIC5.07□□□□□ -1.6
CTNNBIP1Q9NSA3 snoU13.29-201ENST00000459370 104 ntBASIC5.07□□□□□ -1.6
CTNNBIP1Q9NSA3 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC5.07□□□□□ -1.6
CTNNBIP1Q9NSA3 AC084024.1-201ENST00000476186 621 ntTSL 5 BASIC5.07□□□□□ -1.6
CTNNBIP1Q9NSA3 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC5.07□□□□□ -1.6
CTNNBIP1Q9NSA3 PFN2-213ENST00000494827 793 ntTSL 4 BASIC5.07□□□□□ -1.6
CTNNBIP1Q9NSA3 AC090058.1-201ENST00000498788 435 ntBASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms