Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 AC105749.1-201ENST00000631338 2008 ntBASIC5.05□□□□□ -1.6
CSMD1Q96PZ7 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
CSMD1Q96PZ7 AC083864.3-202ENST00000570271 1755 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CSMD1Q96PZ7 PLEC-203ENST00000354589 14736 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
CSMD1Q96PZ7 KLHL5-203ENST00000381930 3288 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CSMD1Q96PZ7 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC5.05□□□□□ -1.6
CSMD1Q96PZ7 MTF1-201ENST00000373036 7972 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CSMD1Q96PZ7 SNORA43.1-201ENST00000364863 140 ntBASIC5.05□□□□□ -1.6
CSMD1Q96PZ7 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC5.05□□□□□ -1.6
CSMD1Q96PZ7 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CSMD1Q96PZ7 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC5.05□□□□□ -1.6
CSMD1Q96PZ7 SNORA70.11-201ENST00000515987 138 ntBASIC5.05□□□□□ -1.6
CSMD1Q96PZ7 SNORA70.13-201ENST00000516116 138 ntBASIC5.05□□□□□ -1.6
CSMD1Q96PZ7 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC5.05□□□□□ -1.6
CSMD1Q96PZ7 AC002090.1-201ENST00000625000 2138 ntBASIC5.05□□□□□ -1.6
CSMD1Q96PZ7 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC5.05□□□□□ -1.6
CSMD1Q96PZ7 SIPA1L2-203ENST00000366630 6690 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
CSMD1Q96PZ7 AP000892.3-201ENST00000624094 5326 ntBASIC5.05□□□□□ -1.6
CSMD1Q96PZ7 CTSC-203ENST00000524463 6125 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CSMD1Q96PZ7 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
CSMD1Q96PZ7 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
CSMD1Q96PZ7 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC5.05□□□□□ -1.6
CSMD1Q96PZ7 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
CSMD1Q96PZ7 ING3-204ENST00000431467 1447 ntTSL 2 BASIC5.05□□□□□ -1.6
CSMD1Q96PZ7 AL133230.1-201ENST00000431019 4587 ntTSL 2 BASIC5.05□□□□□ -1.6
CSMD1Q96PZ7 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CSMD1Q96PZ7 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
CSMD1Q96PZ7 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CSMD1Q96PZ7 KLHL2-204ENST00000506761 2169 ntTSL 5 BASIC5.05□□□□□ -1.6
CSMD1Q96PZ7 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.05□□□□□ -1.6
CSMD1Q96PZ7 AC011753.3-201ENST00000443436 406 ntBASIC5.05□□□□□ -1.6
CSMD1Q96PZ7 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC5.05□□□□□ -1.6
CSMD1Q96PZ7 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.05□□□□□ -1.6
CSMD1Q96PZ7 AL953862.2-201ENST00000603089 820 ntBASIC5.05□□□□□ -1.6
CSMD1Q96PZ7 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC5.05□□□□□ -1.6
CSMD1Q96PZ7 SCN5A-208ENST00000450102 6284 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CSMD1Q96PZ7 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
CSMD1Q96PZ7 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC5.05□□□□□ -1.6
CSMD1Q96PZ7 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CSMD1Q96PZ7 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CSMD1Q96PZ7 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CSMD1Q96PZ7 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
CSMD1Q96PZ7 GUCY1B2-204ENST00000531898 1979 ntBASIC5.04□□□□□ -1.6
CSMD1Q96PZ7 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CSMD1Q96PZ7 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
CSMD1Q96PZ7 PAX6-245ENST00000638914 7300 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CSMD1Q96PZ7 SIPA1L2-201ENST00000262861 6555 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CSMD1Q96PZ7 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.04□□□□□ -1.6
CSMD1Q96PZ7 ZBTB40-204ENST00000404138 8992 ntAPPRIS P3 TSL 5 BASIC5.04□□□□□ -1.6
CSMD1Q96PZ7 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
CSMD1Q96PZ7 LINC00907-205ENST00000589068 1812 ntTSL 2 BASIC5.04□□□□□ -1.6
CSMD1Q96PZ7 SNRPEP6-201ENST00000407465 277 ntBASIC5.04□□□□□ -1.6
CSMD1Q96PZ7 BX119917.1-201ENST00000432517 502 ntBASIC5.04□□□□□ -1.6
CSMD1Q96PZ7 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC5.04□□□□□ -1.6
CSMD1Q96PZ7 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.04□□□□□ -1.6
CSMD1Q96PZ7 AC096741.1-201ENST00000472250 846 ntBASIC5.04□□□□□ -1.6
CSMD1Q96PZ7 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC5.04□□□□□ -1.6
CSMD1Q96PZ7 Y_RNA.710-201ENST00000516975 110 ntBASIC5.04□□□□□ -1.6
CSMD1Q96PZ7 AP001858.2-201ENST00000536213 601 ntBASIC5.04□□□□□ -1.6
CSMD1Q96PZ7 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC5.04□□□□□ -1.6
CSMD1Q96PZ7 AC015923.1-202ENST00000581421 491 ntTSL 2 BASIC5.04□□□□□ -1.6
CSMD1Q96PZ7 MIR6758-201ENST00000620653 63 ntBASIC5.04□□□□□ -1.6
CSMD1Q96PZ7 NWD1-201ENST00000379808 7254 ntTSL 5 BASIC5.04□□□□□ -1.6
CSMD1Q96PZ7 OPCML-207ENST00000541867 6277 ntTSL 5 BASIC5.04□□□□□ -1.6
CSMD1Q96PZ7 OPCML-208ENST00000612177 6250 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
CSMD1Q96PZ7 AC107980.1-201ENST00000558671 3355 ntBASIC5.04□□□□□ -1.6
CSMD1Q96PZ7 CACNA1C-225ENST00000480911 6811 ntTSL 5 BASIC5.04□□□□□ -1.6
CSMD1Q96PZ7 ERN1-201ENST00000433197 7876 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CSMD1Q96PZ7 AL138756.1-201ENST00000563434 4488 ntTSL 2 BASIC5.04□□□□□ -1.6
CSMD1Q96PZ7 ARHGAP19-201ENST00000358308 5390 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CSMD1Q96PZ7 PARP9-202ENST00000462315 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
CSMD1Q96PZ7 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CSMD1Q96PZ7 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
CSMD1Q96PZ7 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
CSMD1Q96PZ7 BRD7-202ENST00000394689 2145 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CSMD1Q96PZ7 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
CSMD1Q96PZ7 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.04□□□□□ -1.6
CSMD1Q96PZ7 RPL36P18-201ENST00000419316 318 ntBASIC5.04□□□□□ -1.6
CSMD1Q96PZ7 NME1P1-201ENST00000420914 382 ntBASIC5.04□□□□□ -1.6
CSMD1Q96PZ7 KIF4CP-201ENST00000422742 1279 ntBASIC5.04□□□□□ -1.6
CSMD1Q96PZ7 TPT1P13-201ENST00000449760 499 ntBASIC5.04□□□□□ -1.6
CSMD1Q96PZ7 AC026979.1-201ENST00000492525 396 ntBASIC5.04□□□□□ -1.6
CSMD1Q96PZ7 AC109481.1-201ENST00000509173 282 ntBASIC5.04□□□□□ -1.6
CSMD1Q96PZ7 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.04□□□□□ -1.6
CSMD1Q96PZ7 USP48-203ENST00000374732 3037 ntTSL 2 BASIC5.04□□□□□ -1.6
CSMD1Q96PZ7 AL357153.1-201ENST00000500016 2941 ntTSL 2 BASIC5.04□□□□□ -1.6
CSMD1Q96PZ7 DLC1-202ENST00000316609 1837 ntTSL 2 BASIC5.04□□□□□ -1.6
CSMD1Q96PZ7 JADE1-214ENST00000611140 5648 ntAPPRIS P3 TSL 5 BASIC5.04□□□□□ -1.6
CSMD1Q96PZ7 HSPA4L-201ENST00000296464 10790 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CSMD1Q96PZ7 AC034229.2-201ENST00000566945 2508 ntBASIC5.04□□□□□ -1.6
CSMD1Q96PZ7 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC5.04□□□□□ -1.6
CSMD1Q96PZ7 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC5.04□□□□□ -1.6
CSMD1Q96PZ7 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CSMD1Q96PZ7 BTBD3-202ENST00000378226 4904 ntAPPRIS P4 TSL 1 (best) BASIC5.04□□□□□ -1.6
CSMD1Q96PZ7 AC244100.2-202ENST00000612584 3878 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CSMD1Q96PZ7 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CSMD1Q96PZ7 NAV2-201ENST00000349880 10960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CSMD1Q96PZ7 P2RY10P2-201ENST00000416730 913 ntBASIC5.04□□□□□ -1.6
CSMD1Q96PZ7 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC5.04□□□□□ -1.6
CSMD1Q96PZ7 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms