Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
AP1S3Q96PC3 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
AP1S3Q96PC3 GPR89A-203ENST00000462900 1527 ntTSL 2 BASIC4.69□□□□□ -1.66
AP1S3Q96PC3 OR5AQ1P-203ENST00000641818 1529 ntBASIC4.69□□□□□ -1.66
AP1S3Q96PC3 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
AP1S3Q96PC3 PDCL3P5-201ENST00000398028 722 ntBASIC4.69□□□□□ -1.66
AP1S3Q96PC3 AL136100.1-201ENST00000407696 330 ntBASIC4.69□□□□□ -1.66
AP1S3Q96PC3 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
AP1S3Q96PC3 RPL31-203ENST00000409028 1110 ntTSL 2 BASIC4.69□□□□□ -1.66
AP1S3Q96PC3 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC4.69□□□□□ -1.66
AP1S3Q96PC3 SNX18P13-201ENST00000412442 529 ntBASIC4.69□□□□□ -1.66
AP1S3Q96PC3 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC4.69□□□□□ -1.66
AP1S3Q96PC3 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
AP1S3Q96PC3 RPL23AP85-201ENST00000421838 433 ntBASIC4.69□□□□□ -1.66
AP1S3Q96PC3 AL121983.2-201ENST00000426899 688 ntTSL 3 BASIC4.69□□□□□ -1.66
AP1S3Q96PC3 LINC00687-201ENST00000427835 558 ntTSL 3 BASIC4.69□□□□□ -1.66
AP1S3Q96PC3 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC4.69□□□□□ -1.66
AP1S3Q96PC3 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC4.69□□□□□ -1.66
AP1S3Q96PC3 AC027124.1-201ENST00000440852 466 ntBASIC4.69□□□□□ -1.66
AP1S3Q96PC3 GAPDHP20-201ENST00000444107 1007 ntBASIC4.69□□□□□ -1.66
AP1S3Q96PC3 HCG14-201ENST00000444986 413 ntTSL 2 BASIC4.69□□□□□ -1.66
AP1S3Q96PC3 AL022068.1-208ENST00000447250 1016 ntTSL 2 BASIC4.69□□□□□ -1.66
AP1S3Q96PC3 MIR4422HG-201ENST00000451250 638 ntTSL 3 BASIC4.69□□□□□ -1.66
AP1S3Q96PC3 AC079193.1-201ENST00000460497 588 ntBASIC4.69□□□□□ -1.66
AP1S3Q96PC3 RPS4XP12-201ENST00000461747 709 ntBASIC4.69□□□□□ -1.66
AP1S3Q96PC3 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC4.69□□□□□ -1.66
AP1S3Q96PC3 RN7SL91P-201ENST00000469313 291 ntBASIC4.69□□□□□ -1.66
AP1S3Q96PC3 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC4.69□□□□□ -1.66
AP1S3Q96PC3 AC022415.1-202ENST00000486612 523 ntBASIC4.69□□□□□ -1.66
AP1S3Q96PC3 AC022206.1-201ENST00000495947 347 ntBASIC4.69□□□□□ -1.66
AP1S3Q96PC3 RPS26P24-201ENST00000497656 331 ntBASIC4.69□□□□□ -1.66
AP1S3Q96PC3 RN7SL284P-201ENST00000498823 275 ntBASIC4.69□□□□□ -1.66
AP1S3Q96PC3 AC110772.1-201ENST00000503037 474 ntTSL 3 BASIC4.69□□□□□ -1.66
AP1S3Q96PC3 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
AP1S3Q96PC3 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC4.69□□□□□ -1.66
AP1S3Q96PC3 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC4.69□□□□□ -1.66
AP1S3Q96PC3 OR52H2P-201ENST00000514607 902 ntBASIC4.69□□□□□ -1.66
AP1S3Q96PC3 RNA5SP400-201ENST00000517155 111 ntBASIC4.69□□□□□ -1.66
AP1S3Q96PC3 AP005902.2-201ENST00000518393 307 ntBASIC4.69□□□□□ -1.66
AP1S3Q96PC3 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC4.69□□□□□ -1.66
AP1S3Q96PC3 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC4.69□□□□□ -1.66
AP1S3Q96PC3 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
AP1S3Q96PC3 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC4.69□□□□□ -1.66
AP1S3Q96PC3 CNIH1-205ENST00000556113 523 ntAPPRIS ALT1 TSL 2 BASIC4.69□□□□□ -1.66
AP1S3Q96PC3 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC4.69□□□□□ -1.66
AP1S3Q96PC3 AC013652.1-204ENST00000558209 489 ntTSL 3 BASIC4.69□□□□□ -1.66
AP1S3Q96PC3 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC4.69□□□□□ -1.66
AP1S3Q96PC3 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC4.69□□□□□ -1.66
AP1S3Q96PC3 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
AP1S3Q96PC3 RN7SL208P-201ENST00000577964 296 ntBASIC4.69□□□□□ -1.66
AP1S3Q96PC3 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC4.69□□□□□ -1.66
AP1S3Q96PC3 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC4.69□□□□□ -1.66
AP1S3Q96PC3 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
AP1S3Q96PC3 BACH1-IT2-202ENST00000608072 691 ntTSL 5 BASIC4.69□□□□□ -1.66
AP1S3Q96PC3 MRPL57P3-201ENST00000619218 176 ntBASIC4.69□□□□□ -1.66
AP1S3Q96PC3 AL035425.4-201ENST00000624509 1063 ntBASIC4.69□□□□□ -1.66
AP1S3Q96PC3 AC017002.5-201ENST00000630717 871 ntTSL 5 BASIC4.69□□□□□ -1.66
AP1S3Q96PC3 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
AP1S3Q96PC3 PARP4P2-201ENST00000446672 3326 ntBASIC4.69□□□□□ -1.66
AP1S3Q96PC3 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC4.69□□□□□ -1.66
AP1S3Q96PC3 AL355834.1-201ENST00000556602 3965 ntBASIC4.69□□□□□ -1.66
AP1S3Q96PC3 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
AP1S3Q96PC3 MED31-201ENST00000225728 1654 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
AP1S3Q96PC3 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC4.69□□□□□ -1.66
AP1S3Q96PC3 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC4.69□□□□□ -1.66
AP1S3Q96PC3 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
AP1S3Q96PC3 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
AP1S3Q96PC3 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC4.69□□□□□ -1.66
AP1S3Q96PC3 AC015689.2-201ENST00000528172 1738 ntBASIC4.69□□□□□ -1.66
AP1S3Q96PC3 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
AP1S3Q96PC3 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
AP1S3Q96PC3 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
AP1S3Q96PC3 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC4.69□□□□□ -1.66
AP1S3Q96PC3 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
AP1S3Q96PC3 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
AP1S3Q96PC3 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
AP1S3Q96PC3 AL137058.3-201ENST00000624531 3099 ntBASIC4.68□□□□□ -1.66
AP1S3Q96PC3 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC4.68□□□□□ -1.66
AP1S3Q96PC3 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.68□□□□□ -1.66
AP1S3Q96PC3 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
AP1S3Q96PC3 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
AP1S3Q96PC3 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
AP1S3Q96PC3 RNA5-8SP5-201ENST00000365304 152 ntBASIC4.68□□□□□ -1.66
AP1S3Q96PC3 TOMM7-202ENST00000372879 514 ntTSL 4 BASIC4.68□□□□□ -1.66
AP1S3Q96PC3 RNA5SP176-201ENST00000390956 110 ntBASIC4.68□□□□□ -1.66
AP1S3Q96PC3 OR2H1-204ENST00000396792 1294 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
AP1S3Q96PC3 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
AP1S3Q96PC3 SPRY4-AS1-201ENST00000414314 521 ntTSL 3 BASIC4.68□□□□□ -1.66
AP1S3Q96PC3 CYP4F30P-202ENST00000420048 405 ntBASIC4.68□□□□□ -1.66
AP1S3Q96PC3 GAPDHP75-201ENST00000433910 943 ntBASIC4.68□□□□□ -1.66
AP1S3Q96PC3 AC012485.2-201ENST00000437372 982 ntTSL 5 BASIC4.68□□□□□ -1.66
AP1S3Q96PC3 LINC00271-203ENST00000438618 1202 ntTSL 3 BASIC4.68□□□□□ -1.66
AP1S3Q96PC3 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC4.68□□□□□ -1.66
AP1S3Q96PC3 AC022730.1-201ENST00000473114 568 ntBASIC4.68□□□□□ -1.66
AP1S3Q96PC3 AC018475.1-201ENST00000478358 465 ntBASIC4.68□□□□□ -1.66
AP1S3Q96PC3 AC093719.1-201ENST00000480427 441 ntBASIC4.68□□□□□ -1.66
AP1S3Q96PC3 FTH1P11-201ENST00000517577 551 ntBASIC4.68□□□□□ -1.66
AP1S3Q96PC3 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC4.68□□□□□ -1.66
AP1S3Q96PC3 BCAS2P1-201ENST00000528022 632 ntBASIC4.68□□□□□ -1.66
AP1S3Q96PC3 OR4C1P-201ENST00000530880 937 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms