Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 AC023886.2-201ENST00000321285 411 ntBASIC8.83□□□□□ -1
TRIM47Q96LD4 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC8.83□□□□□ -1
TRIM47Q96LD4 U3.14-201ENST00000365363 227 ntBASIC8.83□□□□□ -1
TRIM47Q96LD4 SNORD51.1-201ENST00000365405 77 ntBASIC8.83□□□□□ -1
TRIM47Q96LD4 AL450313.1-201ENST00000366376 452 ntTSL 3 BASIC8.83□□□□□ -1
TRIM47Q96LD4 MUC1-205ENST00000368389 543 ntTSL 1 (best) BASIC8.83□□□□□ -1
TRIM47Q96LD4 MUC1-206ENST00000368390 804 ntTSL 1 (best) BASIC8.83□□□□□ -1
TRIM47Q96LD4 MUC1-209ENST00000368396 516 ntTSL 1 (best) BASIC8.83□□□□□ -1
TRIM47Q96LD4 MUC1-210ENST00000368398 729 ntTSL 1 (best) BASIC8.83□□□□□ -1
TRIM47Q96LD4 XAGE5-202ENST00000375501 415 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
TRIM47Q96LD4 CBWD5-205ENST00000377395 1143 ntTSL 1 (best) BASIC8.83□□□□□ -1
TRIM47Q96LD4 RNU1-11P-201ENST00000383975 164 ntBASIC8.83□□□□□ -1
TRIM47Q96LD4 RNU6-1119P-201ENST00000384349 108 ntBASIC8.83□□□□□ -1
TRIM47Q96LD4 AL451061.1-201ENST00000407887 862 ntBASIC8.83□□□□□ -1
TRIM47Q96LD4 RNA5SP177-201ENST00000410122 107 ntBASIC8.83□□□□□ -1
TRIM47Q96LD4 PGBD4P8-201ENST00000412993 562 ntBASIC8.83□□□□□ -1
TRIM47Q96LD4 AL031005.1-201ENST00000416959 723 ntTSL 3 BASIC8.83□□□□□ -1
TRIM47Q96LD4 AF127577.3-201ENST00000430391 781 ntTSL 2 BASIC8.83□□□□□ -1
TRIM47Q96LD4 AL022324.2-201ENST00000434827 780 ntBASIC8.83□□□□□ -1
TRIM47Q96LD4 USP9YP8-201ENST00000441913 500 ntBASIC8.83□□□□□ -1
TRIM47Q96LD4 AL356121.1-201ENST00000442911 156 ntBASIC8.83□□□□□ -1
TRIM47Q96LD4 LIN28AP2-201ENST00000445283 458 ntBASIC8.83□□□□□ -1
TRIM47Q96LD4 GTF2F2P2-201ENST00000445825 721 ntBASIC8.83□□□□□ -1
TRIM47Q96LD4 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC8.83□□□□□ -1
TRIM47Q96LD4 AC009244.1-201ENST00000450566 258 ntBASIC8.83□□□□□ -1
TRIM47Q96LD4 LINC01706-201ENST00000455299 748 ntTSL 1 (best) BASIC8.83□□□□□ -1
TRIM47Q96LD4 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC8.83□□□□□ -1
TRIM47Q96LD4 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC8.83□□□□□ -1
TRIM47Q96LD4 RN7SL267P-201ENST00000485107 261 ntBASIC8.83□□□□□ -1
TRIM47Q96LD4 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC8.83□□□□□ -1
TRIM47Q96LD4 MRPL57P6-201ENST00000506570 309 ntBASIC8.83□□□□□ -1
TRIM47Q96LD4 AC083902.1-201ENST00000508578 359 ntTSL 5 BASIC8.83□□□□□ -1
TRIM47Q96LD4 AL158068.2-201ENST00000510632 563 ntTSL 4 BASIC8.83□□□□□ -1
TRIM47Q96LD4 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC8.83□□□□□ -1
TRIM47Q96LD4 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC8.83□□□□□ -1
TRIM47Q96LD4 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC8.83□□□□□ -1
TRIM47Q96LD4 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC8.83□□□□□ -1
TRIM47Q96LD4 AP005119.2-201ENST00000579735 1105 ntBASIC8.83□□□□□ -1
TRIM47Q96LD4 AC011447.3-202ENST00000593655 555 ntTSL 4 BASIC8.83□□□□□ -1
TRIM47Q96LD4 AL008582.1-201ENST00000609612 442 ntBASIC8.83□□□□□ -1
TRIM47Q96LD4 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC8.83□□□□□ -1
TRIM47Q96LD4 AC010998.3-201ENST00000613871 631 ntBASIC8.83□□□□□ -1
TRIM47Q96LD4 AC013476.2-201ENST00000614456 459 ntBASIC8.83□□□□□ -1
TRIM47Q96LD4 AC005355.2-201ENST00000625064 484 ntBASIC8.83□□□□□ -1
TRIM47Q96LD4 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC8.83□□□□□ -1
TRIM47Q96LD4 UGP2-232ENST00000640075 567 ntTSL 5 BASIC8.83□□□□□ -1
TRIM47Q96LD4 ENOX1-AS1-201ENST00000444442 3907 ntTSL 5 BASIC8.83□□□□□ -1
TRIM47Q96LD4 RIPOR2-205ENST00000510784 3381 ntTSL 2 BASIC8.83□□□□□ -1
TRIM47Q96LD4 LINC02431-202ENST00000505329 1788 ntTSL 1 (best) BASIC8.83□□□□□ -1
TRIM47Q96LD4 IL1RL1-203ENST00000404917 3571 ntTSL 2 BASIC8.83□□□□□ -1
TRIM47Q96LD4 PRLR-208ENST00000509140 1610 ntTSL 5 BASIC8.83□□□□□ -1
TRIM47Q96LD4 KCNA2-214ENST00000640774 6673 ntTSL 5 BASIC8.83□□□□□ -1
TRIM47Q96LD4 BTK-210ENST00000621635 2767 ntTSL 1 (best) BASIC8.83□□□□□ -1
TRIM47Q96LD4 EFTUD2-220ENST00000591382 3675 ntAPPRIS P1 TSL 2 BASIC8.83□□□□□ -1
TRIM47Q96LD4 ZNF430-201ENST00000261560 3923 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
TRIM47Q96LD4 RIOK2-201ENST00000283109 3922 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
TRIM47Q96LD4 NCOA4-204ENST00000581486 3549 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
TRIM47Q96LD4 ERI2-215ENST00000569729 2646 ntTSL 2 BASIC8.83□□□□□ -1
TRIM47Q96LD4 LINC01206-202ENST00000474045 2240 ntTSL 5 BASIC8.82□□□□□ -1
TRIM47Q96LD4 GUCY2GP-201ENST00000479705 3222 ntBASIC8.82□□□□□ -1
TRIM47Q96LD4 FAM107A-202ENST00000394481 3465 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
TRIM47Q96LD4 SPARC-201ENST00000231061 3701 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
TRIM47Q96LD4 AMPD3-204ENST00000444303 3994 ntTSL 2 BASIC8.82□□□□□ -1
TRIM47Q96LD4 HEPH-201ENST00000336279 4228 ntTSL 1 (best) BASIC8.82□□□□□ -1
TRIM47Q96LD4 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC8.82□□□□□ -1
TRIM47Q96LD4 HRH1-201ENST00000397056 4711 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
TRIM47Q96LD4 CASC23-201ENST00000534076 1563 ntTSL 1 (best) BASIC8.82□□□□□ -1
TRIM47Q96LD4 FHL1-216ENST00000535737 2325 ntTSL 3 BASIC8.82□□□□□ -1
TRIM47Q96LD4 CAP1P2-201ENST00000417455 1409 ntBASIC8.82□□□□□ -1
TRIM47Q96LD4 TRIM2-201ENST00000338700 6735 ntTSL 1 (best) BASIC8.82□□□□□ -1
TRIM47Q96LD4 TNFSF15-201ENST00000374044 2789 ntBASIC8.82□□□□□ -1
TRIM47Q96LD4 RPS6KA6-201ENST00000262752 2547 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
TRIM47Q96LD4 LINC02035-201ENST00000610128 5476 ntBASIC8.82□□□□□ -1
TRIM47Q96LD4 STC1-201ENST00000290271 3883 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
TRIM47Q96LD4 COL21A1-212ENST00000535941 3369 ntAPPRIS ALT1 TSL 5 BASIC8.82□□□□□ -1
TRIM47Q96LD4 USP9YP3-201ENST00000434481 1766 ntBASIC8.82□□□□□ -1
TRIM47Q96LD4 MSANTD3-206ENST00000613183 1755 ntAPPRIS P1 TSL 2 BASIC8.82□□□□□ -1
TRIM47Q96LD4 AC087280.2-201ENST00000637205 4822 ntTSL 5 BASIC8.82□□□□□ -1
TRIM47Q96LD4 CASP14-201ENST00000427043 3241 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
TRIM47Q96LD4 RNU5B-4P-201ENST00000363508 111 ntBASIC8.82□□□□□ -1
TRIM47Q96LD4 SNORA7B-201ENST00000384360 139 ntBASIC8.82□□□□□ -1
TRIM47Q96LD4 MIR551B-201ENST00000384984 96 ntBASIC8.82□□□□□ -1
TRIM47Q96LD4 TRAV27-201ENST00000390457 425 ntAPPRIS P1 BASIC8.82□□□□□ -1
TRIM47Q96LD4 RPL5P8-201ENST00000396820 815 ntBASIC8.82□□□□□ -1
TRIM47Q96LD4 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
TRIM47Q96LD4 AL662791.3-201ENST00000413771 776 ntBASIC8.82□□□□□ -1
TRIM47Q96LD4 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC8.82□□□□□ -1
TRIM47Q96LD4 RPL24P2-201ENST00000421023 475 ntBASIC8.82□□□□□ -1
TRIM47Q96LD4 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC8.82□□□□□ -1
TRIM47Q96LD4 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC8.82□□□□□ -1
TRIM47Q96LD4 CYP4F34P-201ENST00000425951 481 ntBASIC8.82□□□□□ -1
TRIM47Q96LD4 AL513321.1-201ENST00000441175 761 ntBASIC8.82□□□□□ -1
TRIM47Q96LD4 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC8.82□□□□□ -1
TRIM47Q96LD4 AC007677.1-201ENST00000445757 515 ntBASIC8.82□□□□□ -1
TRIM47Q96LD4 PPIAP32-201ENST00000449940 472 ntBASIC8.82□□□□□ -1
TRIM47Q96LD4 RPS4XP17-201ENST00000479057 754 ntBASIC8.82□□□□□ -1
TRIM47Q96LD4 ATG10-AS1-201ENST00000504846 648 ntBASIC8.82□□□□□ -1
TRIM47Q96LD4 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC8.82□□□□□ -1
TRIM47Q96LD4 AC112518.2-201ENST00000508565 425 ntBASIC8.82□□□□□ -1
TRIM47Q96LD4 AC091965.2-201ENST00000512324 613 ntBASIC8.82□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms