Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC6.43□□□□□ -1.38
SHROOM3Q8TF72 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC6.43□□□□□ -1.38
SHROOM3Q8TF72 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC6.43□□□□□ -1.38
SHROOM3Q8TF72 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC6.43□□□□□ -1.38
SHROOM3Q8TF72 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
SHROOM3Q8TF72 OCLN-205ENST00000538151 5391 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
SHROOM3Q8TF72 OR52B5P-204ENST00000641744 3467 ntBASIC6.43□□□□□ -1.38
SHROOM3Q8TF72 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC6.43□□□□□ -1.38
SHROOM3Q8TF72 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SHROOM3Q8TF72 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SHROOM3Q8TF72 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
SHROOM3Q8TF72 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
SHROOM3Q8TF72 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
SHROOM3Q8TF72 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SHROOM3Q8TF72 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
SHROOM3Q8TF72 AC079777.1-201ENST00000623836 1953 ntBASIC6.43□□□□□ -1.38
SHROOM3Q8TF72 AC092724.1-201ENST00000624623 3397 ntBASIC6.43□□□□□ -1.38
SHROOM3Q8TF72 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SHROOM3Q8TF72 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
SHROOM3Q8TF72 RNU1-49P-201ENST00000363468 159 ntBASIC6.42□□□□□ -1.38
SHROOM3Q8TF72 RN7SKP278-201ENST00000410504 342 ntBASIC6.42□□□□□ -1.38
SHROOM3Q8TF72 DNAJA1P5-201ENST00000440278 943 ntBASIC6.42□□□□□ -1.38
SHROOM3Q8TF72 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC6.42□□□□□ -1.38
SHROOM3Q8TF72 AL022319.1-201ENST00000458183 1167 ntBASIC6.42□□□□□ -1.38
SHROOM3Q8TF72 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC6.42□□□□□ -1.38
SHROOM3Q8TF72 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC6.42□□□□□ -1.38
SHROOM3Q8TF72 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC6.42□□□□□ -1.38
SHROOM3Q8TF72 AC124891.1-201ENST00000536322 519 ntBASIC6.42□□□□□ -1.38
SHROOM3Q8TF72 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
SHROOM3Q8TF72 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC6.42□□□□□ -1.38
SHROOM3Q8TF72 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC6.42□□□□□ -1.38
SHROOM3Q8TF72 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SHROOM3Q8TF72 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SHROOM3Q8TF72 MGAM-208ENST00000549489 6525 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SHROOM3Q8TF72 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SHROOM3Q8TF72 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
SHROOM3Q8TF72 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SHROOM3Q8TF72 POT1-202ENST00000393329 3950 ntTSL 5 BASIC6.42□□□□□ -1.38
SHROOM3Q8TF72 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC6.42□□□□□ -1.38
SHROOM3Q8TF72 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
SHROOM3Q8TF72 AC006305.1-201ENST00000382897 2558 ntTSL 2 BASIC6.42□□□□□ -1.38
SHROOM3Q8TF72 LINC01776-201ENST00000418344 2229 ntTSL 2 BASIC6.42□□□□□ -1.38
SHROOM3Q8TF72 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC6.42□□□□□ -1.38
SHROOM3Q8TF72 LYARP1-201ENST00000436977 1501 ntBASIC6.42□□□□□ -1.38
SHROOM3Q8TF72 HDAC1P2-201ENST00000453661 1398 ntBASIC6.42□□□□□ -1.38
SHROOM3Q8TF72 AL354854.1-201ENST00000455940 1363 ntBASIC6.42□□□□□ -1.38
SHROOM3Q8TF72 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
SHROOM3Q8TF72 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
SHROOM3Q8TF72 AMELX-201ENST00000348912 737 ntTSL 5 BASIC6.42□□□□□ -1.38
SHROOM3Q8TF72 AC094019.1-201ENST00000434678 472 ntBASIC6.42□□□□□ -1.38
SHROOM3Q8TF72 AL645939.3-201ENST00000435408 225 ntBASIC6.42□□□□□ -1.38
SHROOM3Q8TF72 SNX18P26-201ENST00000458433 740 ntBASIC6.42□□□□□ -1.38
SHROOM3Q8TF72 AC026348.1-201ENST00000462549 1053 ntBASIC6.42□□□□□ -1.38
SHROOM3Q8TF72 RPL17P2-201ENST00000491913 451 ntBASIC6.42□□□□□ -1.38
SHROOM3Q8TF72 IGKV1D-22-201ENST00000518953 324 ntBASIC6.42□□□□□ -1.38
SHROOM3Q8TF72 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC6.42□□□□□ -1.38
SHROOM3Q8TF72 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC6.42□□□□□ -1.38
SHROOM3Q8TF72 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC6.42□□□□□ -1.38
SHROOM3Q8TF72 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SHROOM3Q8TF72 MIR4502-201ENST00000580432 81 ntBASIC6.42□□□□□ -1.38
SHROOM3Q8TF72 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC6.42□□□□□ -1.38
SHROOM3Q8TF72 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
SHROOM3Q8TF72 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
SHROOM3Q8TF72 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SHROOM3Q8TF72 BMS1-201ENST00000374518 7753 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
SHROOM3Q8TF72 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC6.41□□□□□ -1.38
SHROOM3Q8TF72 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SHROOM3Q8TF72 ZNF43-205ENST00000594012 5584 ntAPPRIS ALT2 TSL 2 BASIC6.41□□□□□ -1.38
SHROOM3Q8TF72 FREM2-201ENST00000280481 16070 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
SHROOM3Q8TF72 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
SHROOM3Q8TF72 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SHROOM3Q8TF72 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC6.41□□□□□ -1.38
SHROOM3Q8TF72 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
SHROOM3Q8TF72 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC6.41□□□□□ -1.38
SHROOM3Q8TF72 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SHROOM3Q8TF72 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
SHROOM3Q8TF72 RNA5SP77-201ENST00000365394 120 ntBASIC6.41□□□□□ -1.38
SHROOM3Q8TF72 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC6.41□□□□□ -1.38
SHROOM3Q8TF72 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC6.41□□□□□ -1.38
SHROOM3Q8TF72 RPS3P2-201ENST00000421346 701 ntBASIC6.41□□□□□ -1.38
SHROOM3Q8TF72 VN1R20P-201ENST00000425215 966 ntBASIC6.41□□□□□ -1.38
SHROOM3Q8TF72 OSBPL10-AS1-203ENST00000428872 538 ntTSL 3 BASIC6.41□□□□□ -1.38
SHROOM3Q8TF72 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC6.41□□□□□ -1.38
SHROOM3Q8TF72 AC073109.1-201ENST00000445066 978 ntBASIC6.41□□□□□ -1.38
SHROOM3Q8TF72 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC6.41□□□□□ -1.38
SHROOM3Q8TF72 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC6.41□□□□□ -1.38
SHROOM3Q8TF72 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC6.41□□□□□ -1.38
SHROOM3Q8TF72 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC6.41□□□□□ -1.38
SHROOM3Q8TF72 AP005136.2-201ENST00000583253 1049 ntBASIC6.41□□□□□ -1.38
SHROOM3Q8TF72 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC6.41□□□□□ -1.38
SHROOM3Q8TF72 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC6.41□□□□□ -1.38
SHROOM3Q8TF72 MIR6811-201ENST00000620409 58 ntBASIC6.41□□□□□ -1.38
SHROOM3Q8TF72 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
SHROOM3Q8TF72 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
SHROOM3Q8TF72 AL359976.1-201ENST00000418655 3528 ntBASIC6.41□□□□□ -1.38
SHROOM3Q8TF72 AC096921.2-201ENST00000561507 1916 ntBASIC6.41□□□□□ -1.38
SHROOM3Q8TF72 SMG1P5-202ENST00000529428 4219 ntBASIC6.41□□□□□ -1.38
SHROOM3Q8TF72 SMG1P2-201ENST00000566127 4221 ntBASIC6.41□□□□□ -1.38
SHROOM3Q8TF72 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
SHROOM3Q8TF72 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms