Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 UBDP1-202ENST00000457888 382 ntBASIC6.78□□□□□ -1.32
ATG4DQ86TL0 RPS18P13-201ENST00000461260 454 ntBASIC6.78□□□□□ -1.32
ATG4DQ86TL0 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC6.78□□□□□ -1.32
ATG4DQ86TL0 RN7SL308P-201ENST00000464971 297 ntBASIC6.78□□□□□ -1.32
ATG4DQ86TL0 PDPN-205ENST00000487038 607 ntTSL 2 BASIC6.78□□□□□ -1.32
ATG4DQ86TL0 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC6.78□□□□□ -1.32
ATG4DQ86TL0 AC069304.1-201ENST00000491593 704 ntBASIC6.78□□□□□ -1.32
ATG4DQ86TL0 OR4G11P-201ENST00000492842 939 ntBASIC6.78□□□□□ -1.32
ATG4DQ86TL0 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC6.78□□□□□ -1.32
ATG4DQ86TL0 AC117422.1-201ENST00000508263 379 ntTSL 3 BASIC6.78□□□□□ -1.32
ATG4DQ86TL0 AC008885.2-201ENST00000509506 930 ntBASIC6.78□□□□□ -1.32
ATG4DQ86TL0 AC092336.1-201ENST00000510562 415 ntTSL 3 BASIC6.78□□□□□ -1.32
ATG4DQ86TL0 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC6.78□□□□□ -1.32
ATG4DQ86TL0 NDUFB4P12-201ENST00000513465 390 ntBASIC6.78□□□□□ -1.32
ATG4DQ86TL0 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC6.78□□□□□ -1.32
ATG4DQ86TL0 IGKV2-29-201ENST00000521304 372 ntBASIC6.78□□□□□ -1.32
ATG4DQ86TL0 BUD31P1-201ENST00000521828 359 ntBASIC6.78□□□□□ -1.32
ATG4DQ86TL0 CCDC60-204ENST00000539847 581 ntAPPRIS ALT2 TSL 3 BASIC6.78□□□□□ -1.32
ATG4DQ86TL0 AC122688.2-201ENST00000543922 585 ntTSL 3 BASIC6.78□□□□□ -1.32
ATG4DQ86TL0 PPIAL4D-201ENST00000544708 495 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
ATG4DQ86TL0 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC6.78□□□□□ -1.32
ATG4DQ86TL0 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC6.78□□□□□ -1.32
ATG4DQ86TL0 ARL17A-205ENST00000573185 581 ntAPPRIS ALT2 TSL 3 BASIC6.78□□□□□ -1.32
ATG4DQ86TL0 ARL17B-206ENST00000575698 581 ntTSL 3 BASIC6.78□□□□□ -1.32
ATG4DQ86TL0 MTND1P15-201ENST00000579262 949 ntBASIC6.78□□□□□ -1.32
ATG4DQ86TL0 MIR5705-201ENST00000579870 89 ntBASIC6.78□□□□□ -1.32
ATG4DQ86TL0 AC005884.2-201ENST00000593107 247 ntTSL 5 BASIC6.78□□□□□ -1.32
ATG4DQ86TL0 NUTM2B-AS1-209ENST00000596088 366 ntTSL 3 BASIC6.78□□□□□ -1.32
ATG4DQ86TL0 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC6.78□□□□□ -1.32
ATG4DQ86TL0 PRR13P3-201ENST00000603578 376 ntBASIC6.78□□□□□ -1.32
ATG4DQ86TL0 IGKV1OR2-9-201ENST00000603957 287 ntBASIC6.78□□□□□ -1.32
ATG4DQ86TL0 AC007262.1-201ENST00000604099 321 ntBASIC6.78□□□□□ -1.32
ATG4DQ86TL0 IGKV1OR2-11-201ENST00000604120 287 ntBASIC6.78□□□□□ -1.32
ATG4DQ86TL0 HMGB1P51-201ENST00000605166 638 ntBASIC6.78□□□□□ -1.32
ATG4DQ86TL0 AC019131.2-201ENST00000609071 870 ntBASIC6.78□□□□□ -1.32
ATG4DQ86TL0 SNORD91A-202ENST00000609620 191 ntBASIC6.78□□□□□ -1.32
ATG4DQ86TL0 AC009509.4-201ENST00000619202 509 ntBASIC6.78□□□□□ -1.32
ATG4DQ86TL0 AC016542.3-201ENST00000623520 619 ntBASIC6.78□□□□□ -1.32
ATG4DQ86TL0 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC6.78□□□□□ -1.32
ATG4DQ86TL0 AL353747.4-202ENST00000625787 674 ntTSL 3 BASIC6.78□□□□□ -1.32
ATG4DQ86TL0 5_8S_rRNA.6-201ENST00000637374 152 ntBASIC6.78□□□□□ -1.32
ATG4DQ86TL0 BUB3-203ENST00000368865 7828 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
ATG4DQ86TL0 CD109-201ENST00000287097 9130 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
ATG4DQ86TL0 GLYATL2-201ENST00000287275 1640 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
ATG4DQ86TL0 NLGN4X-201ENST00000275857 5454 ntAPPRIS P2 TSL 1 (best) BASIC6.78□□□□□ -1.32
ATG4DQ86TL0 DTNA-205ENST00000399113 2232 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
ATG4DQ86TL0 MBD5-201ENST00000404807 5920 ntTSL 5 BASIC6.78□□□□□ -1.32
ATG4DQ86TL0 ZNF840P-201ENST00000504759 1996 ntBASIC6.78□□□□□ -1.32
ATG4DQ86TL0 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC6.78□□□□□ -1.32
ATG4DQ86TL0 AL357556.1-201ENST00000421884 1388 ntBASIC6.78□□□□□ -1.32
ATG4DQ86TL0 SPANXN2-201ENST00000598475 1378 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
ATG4DQ86TL0 CDY1-201ENST00000306609 2321 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
ATG4DQ86TL0 CDY1B-201ENST00000306882 2321 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
ATG4DQ86TL0 AC091806.1-201ENST00000452690 3000 ntTSL 2 BASIC6.78□□□□□ -1.32
ATG4DQ86TL0 SCN8A-201ENST00000354534 11556 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
ATG4DQ86TL0 AC007923.2-201ENST00000584218 1591 ntBASIC6.78□□□□□ -1.32
ATG4DQ86TL0 GABPB2-202ENST00000368918 8964 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.32
ATG4DQ86TL0 TRPS1-203ENST00000395715 9990 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.32
ATG4DQ86TL0 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC6.77□□□□□ -1.32
ATG4DQ86TL0 PARD3-212ENST00000544292 2475 ntTSL 1 (best) BASIC6.77□□□□□ -1.32
ATG4DQ86TL0 MAPK10-333ENST00000641607 2481 ntBASIC6.77□□□□□ -1.32
ATG4DQ86TL0 TSHR-201ENST00000298171 4400 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
ATG4DQ86TL0 RBM41-202ENST00000372487 2579 ntAPPRIS ALT1 TSL 2 BASIC6.77□□□□□ -1.33
ATG4DQ86TL0 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC6.77□□□□□ -1.33
ATG4DQ86TL0 OSER1-202ENST00000372970 1616 ntAPPRIS P1 TSL 3 BASIC6.77□□□□□ -1.33
ATG4DQ86TL0 LPA-201ENST00000316300 6414 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
ATG4DQ86TL0 MFSD6-201ENST00000281416 4608 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
ATG4DQ86TL0 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
ATG4DQ86TL0 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
ATG4DQ86TL0 RNU4-76P-201ENST00000364509 141 ntBASIC6.77□□□□□ -1.33
ATG4DQ86TL0 HHLA3-203ENST00000370940 775 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
ATG4DQ86TL0 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC6.77□□□□□ -1.33
ATG4DQ86TL0 TMEM126B-202ENST00000393375 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
ATG4DQ86TL0 CHMP1B2P-201ENST00000399581 597 ntBASIC6.77□□□□□ -1.33
ATG4DQ86TL0 GRXCR1-201ENST00000399770 991 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
ATG4DQ86TL0 RSL24D1P4-201ENST00000400938 484 ntBASIC6.77□□□□□ -1.33
ATG4DQ86TL0 AL590084.1-201ENST00000407885 387 ntBASIC6.77□□□□□ -1.33
ATG4DQ86TL0 SRSF7-202ENST00000409276 1050 ntTSL 5 BASIC6.77□□□□□ -1.33
ATG4DQ86TL0 AC093642.1-201ENST00000412193 565 ntTSL 3 BASIC6.77□□□□□ -1.33
ATG4DQ86TL0 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC6.77□□□□□ -1.33
ATG4DQ86TL0 AC090617.1-201ENST00000413674 323 ntTSL 2 BASIC6.77□□□□□ -1.33
ATG4DQ86TL0 AC009237.9-201ENST00000414800 347 ntBASIC6.77□□□□□ -1.33
ATG4DQ86TL0 AC127537.1-201ENST00000418183 748 ntBASIC6.77□□□□□ -1.33
ATG4DQ86TL0 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC6.77□□□□□ -1.33
ATG4DQ86TL0 RPL7P53-201ENST00000421245 739 ntBASIC6.77□□□□□ -1.33
ATG4DQ86TL0 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC6.77□□□□□ -1.33
ATG4DQ86TL0 AC092646.1-201ENST00000427142 901 ntBASIC6.77□□□□□ -1.33
ATG4DQ86TL0 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC6.77□□□□□ -1.33
ATG4DQ86TL0 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC6.77□□□□□ -1.33
ATG4DQ86TL0 AL772337.3-201ENST00000447524 452 ntTSL 3 BASIC6.77□□□□□ -1.33
ATG4DQ86TL0 PCMTD1P3-201ENST00000451824 472 ntBASIC6.77□□□□□ -1.33
ATG4DQ86TL0 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
ATG4DQ86TL0 RNU6-956P-201ENST00000458868 103 ntBASIC6.77□□□□□ -1.33
ATG4DQ86TL0 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC6.77□□□□□ -1.33
ATG4DQ86TL0 FCRL2-205ENST00000469986 902 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
ATG4DQ86TL0 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC6.77□□□□□ -1.33
ATG4DQ86TL0 SEC62-AS1-201ENST00000479626 346 ntTSL 5 BASIC6.77□□□□□ -1.33
ATG4DQ86TL0 LINC00518-202ENST00000479822 906 ntTSL 3 BASIC6.77□□□□□ -1.33
ATG4DQ86TL0 LINC02024-202ENST00000493545 483 ntTSL 3 BASIC6.77□□□□□ -1.33
ATG4DQ86TL0 AC006487.2-201ENST00000503624 577 ntTSL 4 BASIC6.77□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms