Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC4.26□□□□□ -1.73
SCXQ7RTU7 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC4.26□□□□□ -1.73
SCXQ7RTU7 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SCXQ7RTU7 ANP32BP1-202ENST00000568553 737 ntBASIC4.26□□□□□ -1.73
SCXQ7RTU7 RN7SL230P-201ENST00000580835 303 ntBASIC4.26□□□□□ -1.73
SCXQ7RTU7 AC087575.1-201ENST00000585087 229 ntBASIC4.26□□□□□ -1.73
SCXQ7RTU7 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC4.26□□□□□ -1.73
SCXQ7RTU7 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC4.26□□□□□ -1.73
SCXQ7RTU7 AC011891.2-201ENST00000604949 397 ntBASIC4.26□□□□□ -1.73
SCXQ7RTU7 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC4.26□□□□□ -1.73
SCXQ7RTU7 AC026951.2-201ENST00000613847 241 ntBASIC4.26□□□□□ -1.73
SCXQ7RTU7 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC4.26□□□□□ -1.73
SCXQ7RTU7 SNORA16A-202ENST00000628458 135 ntBASIC4.26□□□□□ -1.73
SCXQ7RTU7 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SCXQ7RTU7 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SCXQ7RTU7 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
SCXQ7RTU7 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC4.26□□□□□ -1.73
SCXQ7RTU7 FDFT1-222ENST00000538689 2289 ntTSL 2 BASIC4.26□□□□□ -1.73
SCXQ7RTU7 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SCXQ7RTU7 AL157831.2-201ENST00000564681 3095 ntBASIC4.26□□□□□ -1.73
SCXQ7RTU7 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SCXQ7RTU7 AC104837.1-201ENST00000444644 1587 ntBASIC4.26□□□□□ -1.73
SCXQ7RTU7 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SCXQ7RTU7 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
SCXQ7RTU7 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SCXQ7RTU7 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
SCXQ7RTU7 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SCXQ7RTU7 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC4.25□□□□□ -1.73
SCXQ7RTU7 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SCXQ7RTU7 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SCXQ7RTU7 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC4.25□□□□□ -1.73
SCXQ7RTU7 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SCXQ7RTU7 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
SCXQ7RTU7 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
SCXQ7RTU7 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC4.25□□□□□ -1.73
SCXQ7RTU7 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC4.25□□□□□ -1.73
SCXQ7RTU7 PSMC1P4-201ENST00000515236 1327 ntBASIC4.25□□□□□ -1.73
SCXQ7RTU7 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
SCXQ7RTU7 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SCXQ7RTU7 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC4.25□□□□□ -1.73
SCXQ7RTU7 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC4.25□□□□□ -1.73
SCXQ7RTU7 IARS-206ENST00000447699 4186 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SCXQ7RTU7 CCL1-201ENST00000225842 592 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SCXQ7RTU7 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
SCXQ7RTU7 IL5RA-201ENST00000256452 2001 ntAPPRIS P4 TSL 1 (best) BASIC4.25□□□□□ -1.73
SCXQ7RTU7 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC4.25□□□□□ -1.73
SCXQ7RTU7 RNU1-65P-201ENST00000363919 148 ntBASIC4.25□□□□□ -1.73
SCXQ7RTU7 U3.52-201ENST00000384034 216 ntBASIC4.25□□□□□ -1.73
SCXQ7RTU7 MIR1275-201ENST00000408770 80 ntBASIC4.25□□□□□ -1.73
SCXQ7RTU7 RPL31-202ENST00000409000 641 ntTSL 2 BASIC4.25□□□□□ -1.73
SCXQ7RTU7 RN7SKP86-201ENST00000410454 332 ntBASIC4.25□□□□□ -1.73
SCXQ7RTU7 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC4.25□□□□□ -1.73
SCXQ7RTU7 RANP6-201ENST00000413691 644 ntBASIC4.25□□□□□ -1.73
SCXQ7RTU7 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC4.25□□□□□ -1.73
SCXQ7RTU7 AL663061.1-201ENST00000416625 580 ntBASIC4.25□□□□□ -1.73
SCXQ7RTU7 REREP1Y-201ENST00000422655 198 ntBASIC4.25□□□□□ -1.73
SCXQ7RTU7 AL354893.1-201ENST00000433735 348 ntBASIC4.25□□□□□ -1.73
SCXQ7RTU7 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SCXQ7RTU7 REREP2Y-201ENST00000439103 200 ntBASIC4.25□□□□□ -1.73
SCXQ7RTU7 AC007383.1-201ENST00000445875 636 ntBASIC4.25□□□□□ -1.73
SCXQ7RTU7 AL161722.1-201ENST00000446972 1032 ntBASIC4.25□□□□□ -1.73
SCXQ7RTU7 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SCXQ7RTU7 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC4.25□□□□□ -1.73
SCXQ7RTU7 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SCXQ7RTU7 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC4.25□□□□□ -1.73
SCXQ7RTU7 CTSLP6-201ENST00000458273 1002 ntBASIC4.25□□□□□ -1.73
SCXQ7RTU7 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC4.25□□□□□ -1.73
SCXQ7RTU7 AC104339.1-201ENST00000465478 348 ntBASIC4.25□□□□□ -1.73
SCXQ7RTU7 RN7SL170P-201ENST00000487098 295 ntBASIC4.25□□□□□ -1.73
SCXQ7RTU7 SCG5-207ENST00000497208 949 ntTSL 5 BASIC4.25□□□□□ -1.73
SCXQ7RTU7 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC4.25□□□□□ -1.73
SCXQ7RTU7 AC093664.1-201ENST00000511779 289 ntBASIC4.25□□□□□ -1.73
SCXQ7RTU7 Vault.2-201ENST00000516519 98 ntBASIC4.25□□□□□ -1.73
SCXQ7RTU7 SNORA81.2-201ENST00000516868 170 ntBASIC4.25□□□□□ -1.73
SCXQ7RTU7 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC4.25□□□□□ -1.73
SCXQ7RTU7 AP003080.1-202ENST00000526526 915 ntBASIC4.25□□□□□ -1.73
SCXQ7RTU7 AP000662.1-201ENST00000530952 487 ntBASIC4.25□□□□□ -1.73
SCXQ7RTU7 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC4.25□□□□□ -1.73
SCXQ7RTU7 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC4.25□□□□□ -1.73
SCXQ7RTU7 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
SCXQ7RTU7 LINC02207-201ENST00000554530 1256 ntTSL 5 BASIC4.25□□□□□ -1.73
SCXQ7RTU7 AL445383.1-201ENST00000554689 874 ntBASIC4.25□□□□□ -1.73
SCXQ7RTU7 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC4.25□□□□□ -1.73
SCXQ7RTU7 AC092718.2-202ENST00000566390 556 ntTSL 4 BASIC4.25□□□□□ -1.73
SCXQ7RTU7 AC016839.1-201ENST00000578162 867 ntBASIC4.25□□□□□ -1.73
SCXQ7RTU7 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC4.25□□□□□ -1.73
SCXQ7RTU7 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC4.25□□□□□ -1.73
SCXQ7RTU7 AL591926.1-201ENST00000620542 217 ntBASIC4.25□□□□□ -1.73
SCXQ7RTU7 AL683826.1-201ENST00000624104 627 ntBASIC4.25□□□□□ -1.73
SCXQ7RTU7 AC132825.8-201ENST00000640783 297 ntBASIC4.25□□□□□ -1.73
SCXQ7RTU7 5S_rRNA.29-201ENST00000641250 107 ntBASIC4.25□□□□□ -1.73
SCXQ7RTU7 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SCXQ7RTU7 GUCY1B2-203ENST00000493639 2871 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SCXQ7RTU7 AC116158.1-201ENST00000560231 2129 ntBASIC4.25□□□□□ -1.73
SCXQ7RTU7 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SCXQ7RTU7 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC4.25□□□□□ -1.73
SCXQ7RTU7 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC4.25□□□□□ -1.73
SCXQ7RTU7 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
SCXQ7RTU7 GTF2IP4-201ENST00000453092 2054 ntBASIC4.25□□□□□ -1.73
SCXQ7RTU7 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 114.9 ms