Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 RNA5SP188-201ENST00000362916 129 ntBASIC6.56□□□□□ -1.36
RFWD3Q6PCD5 AL050335.1-201ENST00000396909 869 ntBASIC6.56□□□□□ -1.36
RFWD3Q6PCD5 RBBP4P5-201ENST00000398583 1266 ntBASIC6.56□□□□□ -1.36
RFWD3Q6PCD5 OR2W4P-201ENST00000406496 926 ntBASIC6.56□□□□□ -1.36
RFWD3Q6PCD5 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC6.56□□□□□ -1.36
RFWD3Q6PCD5 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC6.56□□□□□ -1.36
RFWD3Q6PCD5 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC6.56□□□□□ -1.36
RFWD3Q6PCD5 AC094019.1-201ENST00000434678 472 ntBASIC6.56□□□□□ -1.36
RFWD3Q6PCD5 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC6.56□□□□□ -1.36
RFWD3Q6PCD5 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC6.56□□□□□ -1.36
RFWD3Q6PCD5 AC068491.1-201ENST00000449539 1241 ntBASIC6.56□□□□□ -1.36
RFWD3Q6PCD5 CCNJP2-201ENST00000457810 1163 ntBASIC6.56□□□□□ -1.36
RFWD3Q6PCD5 SNX18P25-201ENST00000510539 758 ntBASIC6.56□□□□□ -1.36
RFWD3Q6PCD5 OR51A1P-201ENST00000511110 946 ntBASIC6.56□□□□□ -1.36
RFWD3Q6PCD5 AC084337.1-201ENST00000524809 686 ntBASIC6.56□□□□□ -1.36
RFWD3Q6PCD5 AP003080.1-202ENST00000526526 915 ntBASIC6.56□□□□□ -1.36
RFWD3Q6PCD5 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC6.56□□□□□ -1.36
RFWD3Q6PCD5 DCN-209ENST00000546745 1026 ntTSL 3 BASIC6.56□□□□□ -1.36
RFWD3Q6PCD5 SMIM12P1-201ENST00000603004 274 ntBASIC6.56□□□□□ -1.36
RFWD3Q6PCD5 AL008723.3-201ENST00000608926 449 ntBASIC6.56□□□□□ -1.36
RFWD3Q6PCD5 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC6.56□□□□□ -1.36
RFWD3Q6PCD5 CASC19-274ENST00000642018 970 ntBASIC6.56□□□□□ -1.36
RFWD3Q6PCD5 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC6.56□□□□□ -1.36
RFWD3Q6PCD5 LIPA-203ENST00000371837 2513 ntTSL 2 BASIC6.56□□□□□ -1.36
RFWD3Q6PCD5 AC093297.3-201ENST00000607056 2517 ntBASIC6.56□□□□□ -1.36
RFWD3Q6PCD5 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
RFWD3Q6PCD5 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
RFWD3Q6PCD5 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
RFWD3Q6PCD5 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
RFWD3Q6PCD5 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC6.56□□□□□ -1.36
RFWD3Q6PCD5 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC6.56□□□□□ -1.36
RFWD3Q6PCD5 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC6.56□□□□□ -1.36
RFWD3Q6PCD5 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
RFWD3Q6PCD5 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC6.56□□□□□ -1.36
RFWD3Q6PCD5 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
RFWD3Q6PCD5 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
RFWD3Q6PCD5 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.56□□□□□ -1.36
RFWD3Q6PCD5 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
RFWD3Q6PCD5 AL136984.1-201ENST00000607611 1893 ntBASIC6.56□□□□□ -1.36
RFWD3Q6PCD5 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
RFWD3Q6PCD5 YES1-203ENST00000577961 4554 ntTSL 5 BASIC6.55□□□□□ -1.36
RFWD3Q6PCD5 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
RFWD3Q6PCD5 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
RFWD3Q6PCD5 CXADRP1-201ENST00000398098 1095 ntBASIC6.55□□□□□ -1.36
RFWD3Q6PCD5 OOSP1-201ENST00000398992 1270 ntBASIC6.55□□□□□ -1.36
RFWD3Q6PCD5 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC6.55□□□□□ -1.36
RFWD3Q6PCD5 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC6.55□□□□□ -1.36
RFWD3Q6PCD5 POU5F1P5-201ENST00000445059 658 ntBASIC6.55□□□□□ -1.36
RFWD3Q6PCD5 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
RFWD3Q6PCD5 AC093166.3-201ENST00000448785 303 ntBASIC6.55□□□□□ -1.36
RFWD3Q6PCD5 AL133351.3-201ENST00000454998 193 ntBASIC6.55□□□□□ -1.36
RFWD3Q6PCD5 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC6.55□□□□□ -1.36
RFWD3Q6PCD5 UCK2-205ENST00000469256 753 ntTSL 3 BASIC6.55□□□□□ -1.36
RFWD3Q6PCD5 RN7SL643P-201ENST00000471845 291 ntBASIC6.55□□□□□ -1.36
RFWD3Q6PCD5 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC6.55□□□□□ -1.36
RFWD3Q6PCD5 RPL12P31-201ENST00000478433 450 ntBASIC6.55□□□□□ -1.36
RFWD3Q6PCD5 RN7SL170P-201ENST00000487098 295 ntBASIC6.55□□□□□ -1.36
RFWD3Q6PCD5 AC122718.2-201ENST00000505325 591 ntBASIC6.55□□□□□ -1.36
RFWD3Q6PCD5 RN7SKP248-201ENST00000516278 305 ntBASIC6.55□□□□□ -1.36
RFWD3Q6PCD5 IGKV1D-22-201ENST00000518953 324 ntBASIC6.55□□□□□ -1.36
RFWD3Q6PCD5 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC6.55□□□□□ -1.36
RFWD3Q6PCD5 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC6.55□□□□□ -1.36
RFWD3Q6PCD5 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC6.55□□□□□ -1.36
RFWD3Q6PCD5 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC6.55□□□□□ -1.36
RFWD3Q6PCD5 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC6.55□□□□□ -1.36
RFWD3Q6PCD5 AL121579.2-201ENST00000555466 590 ntBASIC6.55□□□□□ -1.36
RFWD3Q6PCD5 MIR4502-201ENST00000580432 81 ntBASIC6.55□□□□□ -1.36
RFWD3Q6PCD5 GLYATL1P2-202ENST00000588046 902 ntBASIC6.55□□□□□ -1.36
RFWD3Q6PCD5 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC6.55□□□□□ -1.36
RFWD3Q6PCD5 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC6.55□□□□□ -1.36
RFWD3Q6PCD5 CXADRP3-202ENST00000617265 1100 ntBASIC6.55□□□□□ -1.36
RFWD3Q6PCD5 AC012254.5-201ENST00000623573 478 ntBASIC6.55□□□□□ -1.36
RFWD3Q6PCD5 EEF1A1P24-201ENST00000451469 1378 ntBASIC6.55□□□□□ -1.36
RFWD3Q6PCD5 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
RFWD3Q6PCD5 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC6.54□□□□□ -1.36
RFWD3Q6PCD5 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
RFWD3Q6PCD5 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
RFWD3Q6PCD5 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
RFWD3Q6PCD5 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC6.54□□□□□ -1.36
RFWD3Q6PCD5 AL033543.1-201ENST00000623440 13454 ntBASIC6.54□□□□□ -1.36
RFWD3Q6PCD5 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
RFWD3Q6PCD5 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC6.54□□□□□ -1.36
RFWD3Q6PCD5 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
RFWD3Q6PCD5 AC011455.2-201ENST00000599320 3336 ntBASIC6.54□□□□□ -1.36
RFWD3Q6PCD5 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
RFWD3Q6PCD5 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
RFWD3Q6PCD5 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC6.54□□□□□ -1.36
RFWD3Q6PCD5 VN1R12P-201ENST00000403778 876 ntBASIC6.54□□□□□ -1.36
RFWD3Q6PCD5 GCNT1P4-201ENST00000404096 329 ntBASIC6.54□□□□□ -1.36
RFWD3Q6PCD5 SNORA11.5-201ENST00000408163 128 ntBASIC6.54□□□□□ -1.36
RFWD3Q6PCD5 U3.43-201ENST00000410734 213 ntBASIC6.54□□□□□ -1.36
RFWD3Q6PCD5 AC092865.3-201ENST00000425390 1026 ntBASIC6.54□□□□□ -1.36
RFWD3Q6PCD5 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC6.54□□□□□ -1.36
RFWD3Q6PCD5 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC6.54□□□□□ -1.36
RFWD3Q6PCD5 CTSLP6-201ENST00000458273 1002 ntBASIC6.54□□□□□ -1.36
RFWD3Q6PCD5 RN7SL104P-201ENST00000498686 293 ntBASIC6.54□□□□□ -1.36
RFWD3Q6PCD5 SNX18P24-201ENST00000505249 671 ntBASIC6.54□□□□□ -1.36
RFWD3Q6PCD5 AC091874.2-201ENST00000505889 720 ntBASIC6.54□□□□□ -1.36
RFWD3Q6PCD5 AC106800.3-201ENST00000511389 308 ntBASIC6.54□□□□□ -1.36
RFWD3Q6PCD5 AC011853.1-201ENST00000518911 454 ntBASIC6.54□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms