Protein–RNA interactions for Protein: Q05086

UBE3A, Ubiquitin-protein ligase E3A, humanhuman

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3AQ05086 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC6.9□□□□□ -1.3
UBE3AQ05086 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
UBE3AQ05086 OR52Y1P-201ENST00000452418 828 ntBASIC6.9□□□□□ -1.3
UBE3AQ05086 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC6.9□□□□□ -1.3
UBE3AQ05086 RPL12P31-201ENST00000478433 450 ntBASIC6.9□□□□□ -1.3
UBE3AQ05086 AC117395.1-201ENST00000487390 403 ntBASIC6.9□□□□□ -1.3
UBE3AQ05086 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC6.9□□□□□ -1.3
UBE3AQ05086 OR7E99P-201ENST00000505750 922 ntBASIC6.9□□□□□ -1.3
UBE3AQ05086 AC095052.1-201ENST00000509955 863 ntBASIC6.9□□□□□ -1.3
UBE3AQ05086 LINC01493-202ENST00000533575 581 ntTSL 4 BASIC6.9□□□□□ -1.3
UBE3AQ05086 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
UBE3AQ05086 AL049874.4-201ENST00000557593 255 ntBASIC6.9□□□□□ -1.3
UBE3AQ05086 AC092332.1-201ENST00000563684 829 ntBASIC6.9□□□□□ -1.3
UBE3AQ05086 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
UBE3AQ05086 MIR3614-201ENST00000581261 86 ntBASIC6.9□□□□□ -1.3
UBE3AQ05086 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC6.9□□□□□ -1.3
UBE3AQ05086 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC6.9□□□□□ -1.3
UBE3AQ05086 AL356986.1-201ENST00000604085 341 ntBASIC6.9□□□□□ -1.3
UBE3AQ05086 GMCL1P2-201ENST00000605230 823 ntBASIC6.9□□□□□ -1.3
UBE3AQ05086 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC6.9□□□□□ -1.3
UBE3AQ05086 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC6.9□□□□□ -1.3
UBE3AQ05086 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC6.9□□□□□ -1.3
UBE3AQ05086 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC6.9□□□□□ -1.3
UBE3AQ05086 DTHD1-206ENST00000639862 3819 ntTSL 5 BASIC6.9□□□□□ -1.3
UBE3AQ05086 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.3
UBE3AQ05086 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
UBE3AQ05086 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
UBE3AQ05086 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC6.9□□□□□ -1.31
UBE3AQ05086 AC125238.2-201ENST00000430003 1440 ntBASIC6.9□□□□□ -1.31
UBE3AQ05086 CCR2-204ENST00000445132 2386 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
UBE3AQ05086 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC6.9□□□□□ -1.31
UBE3AQ05086 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC6.9□□□□□ -1.31
UBE3AQ05086 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC6.9□□□□□ -1.31
UBE3AQ05086 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
UBE3AQ05086 ANK2-215ENST00000509550 3638 ntTSL 2 BASIC6.9□□□□□ -1.31
UBE3AQ05086 AC022075.1-201ENST00000500682 2830 ntTSL 2 BASIC6.9□□□□□ -1.31
UBE3AQ05086 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC6.9□□□□□ -1.31
UBE3AQ05086 KARSP1-201ENST00000451871 1752 ntBASIC6.9□□□□□ -1.31
UBE3AQ05086 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
UBE3AQ05086 OR11G2-203ENST00000641879 4415 ntAPPRIS P1 BASIC6.9□□□□□ -1.31
UBE3AQ05086 AL033543.1-201ENST00000623440 13454 ntBASIC6.89□□□□□ -1.31
UBE3AQ05086 CTPS1-201ENST00000372616 2037 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
UBE3AQ05086 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
UBE3AQ05086 ORC3-206ENST00000546266 2470 ntTSL 2 BASIC6.89□□□□□ -1.31
UBE3AQ05086 ADAM3A-207ENST00000490268 2627 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
UBE3AQ05086 ZNF625-ZNF20-201ENST00000430024 2651 ntAPPRIS P5 TSL 5 BASIC6.89□□□□□ -1.31
UBE3AQ05086 NXF2B-204ENST00000618302 2884 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
UBE3AQ05086 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
UBE3AQ05086 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
UBE3AQ05086 SNORA51.9-201ENST00000384295 124 ntBASIC6.89□□□□□ -1.31
UBE3AQ05086 SLC20A1P1-201ENST00000413906 956 ntBASIC6.89□□□□□ -1.31
UBE3AQ05086 PSMC1P2-201ENST00000423961 1204 ntBASIC6.89□□□□□ -1.31
UBE3AQ05086 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC6.89□□□□□ -1.31
UBE3AQ05086 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC6.89□□□□□ -1.31
UBE3AQ05086 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC6.89□□□□□ -1.31
UBE3AQ05086 RN7SKP35-201ENST00000517210 151 ntBASIC6.89□□□□□ -1.31
UBE3AQ05086 IGKV3D-25-201ENST00000519599 235 ntBASIC6.89□□□□□ -1.31
UBE3AQ05086 IGHV4-55-201ENST00000520889 368 ntBASIC6.89□□□□□ -1.31
UBE3AQ05086 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC6.89□□□□□ -1.31
UBE3AQ05086 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC6.89□□□□□ -1.31
UBE3AQ05086 PRELID3BP3-201ENST00000584963 545 ntBASIC6.89□□□□□ -1.31
UBE3AQ05086 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC6.89□□□□□ -1.31
UBE3AQ05086 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC6.89□□□□□ -1.31
UBE3AQ05086 AC011445.2-201ENST00000599274 173 ntBASIC6.89□□□□□ -1.31
UBE3AQ05086 AL133406.3-201ENST00000606817 541 ntBASIC6.89□□□□□ -1.31
UBE3AQ05086 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
UBE3AQ05086 AC120057.5-201ENST00000623840 154 ntBASIC6.89□□□□□ -1.31
UBE3AQ05086 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC6.89□□□□□ -1.31
UBE3AQ05086 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC6.89□□□□□ -1.31
UBE3AQ05086 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC6.89□□□□□ -1.31
UBE3AQ05086 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC6.89□□□□□ -1.31
UBE3AQ05086 EEF1A1P21-201ENST00000512363 1344 ntBASIC6.89□□□□□ -1.31
UBE3AQ05086 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC6.89□□□□□ -1.31
UBE3AQ05086 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
UBE3AQ05086 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
UBE3AQ05086 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
UBE3AQ05086 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
UBE3AQ05086 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
UBE3AQ05086 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC6.89□□□□□ -1.31
UBE3AQ05086 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
UBE3AQ05086 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
UBE3AQ05086 SLC36A4-206ENST00000529184 1917 ntTSL 2 BASIC6.89□□□□□ -1.31
UBE3AQ05086 MITF-206ENST00000394351 1956 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
UBE3AQ05086 SPIRE1-206ENST00000453447 2107 ntTSL 5 BASIC6.89□□□□□ -1.31
UBE3AQ05086 ABCA11P-202ENST00000504019 2110 ntBASIC6.89□□□□□ -1.31
UBE3AQ05086 VTCN1-201ENST00000328189 2289 ntTSL 5 BASIC6.89□□□□□ -1.31
UBE3AQ05086 AC126323.2-201ENST00000559985 2369 ntTSL 5 BASIC6.89□□□□□ -1.31
UBE3AQ05086 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
UBE3AQ05086 HBS1L-206ENST00000415177 2636 ntTSL 5 BASIC6.89□□□□□ -1.31
UBE3AQ05086 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
UBE3AQ05086 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC6.89□□□□□ -1.31
UBE3AQ05086 NR5A2-206ENST00000544748 4775 ntAPPRIS ALT1 TSL 2 BASIC6.89□□□□□ -1.31
UBE3AQ05086 RGPD3-201ENST00000304514 5510 ntAPPRIS ALT2 TSL 2 BASIC6.89□□□□□ -1.31
UBE3AQ05086 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
UBE3AQ05086 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC6.88□□□□□ -1.31
UBE3AQ05086 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC6.88□□□□□ -1.31
UBE3AQ05086 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
UBE3AQ05086 AC027575.3-201ENST00000583058 2747 ntBASIC6.88□□□□□ -1.31
UBE3AQ05086 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
UBE3AQ05086 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC6.88□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms