Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC5.99□□□□□ -1.45
HMGCS1Q01581 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC5.99□□□□□ -1.45
HMGCS1Q01581 AC138517.1-201ENST00000515724 568 ntBASIC5.99□□□□□ -1.45
HMGCS1Q01581 RN7SKP248-201ENST00000516278 305 ntBASIC5.99□□□□□ -1.45
HMGCS1Q01581 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
HMGCS1Q01581 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC5.99□□□□□ -1.45
HMGCS1Q01581 RPA2P3-201ENST00000533268 770 ntBASIC5.99□□□□□ -1.45
HMGCS1Q01581 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC5.99□□□□□ -1.45
HMGCS1Q01581 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC5.99□□□□□ -1.45
HMGCS1Q01581 AC008055.1-201ENST00000547032 609 ntBASIC5.99□□□□□ -1.45
HMGCS1Q01581 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
HMGCS1Q01581 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC5.99□□□□□ -1.45
HMGCS1Q01581 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC5.99□□□□□ -1.45
HMGCS1Q01581 AC027334.1-201ENST00000603257 310 ntBASIC5.99□□□□□ -1.45
HMGCS1Q01581 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC5.99□□□□□ -1.45
HMGCS1Q01581 GAPDHP41-201ENST00000613707 975 ntBASIC5.99□□□□□ -1.45
HMGCS1Q01581 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC5.99□□□□□ -1.45
HMGCS1Q01581 AC007603.3-201ENST00000636915 979 ntBASIC5.99□□□□□ -1.45
HMGCS1Q01581 OR7A1P-202ENST00000641542 1158 ntBASIC5.99□□□□□ -1.45
HMGCS1Q01581 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
HMGCS1Q01581 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
HMGCS1Q01581 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC5.99□□□□□ -1.45
HMGCS1Q01581 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
HMGCS1Q01581 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
HMGCS1Q01581 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC5.99□□□□□ -1.45
HMGCS1Q01581 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
HMGCS1Q01581 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC5.99□□□□□ -1.45
HMGCS1Q01581 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
HMGCS1Q01581 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
HMGCS1Q01581 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
HMGCS1Q01581 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
HMGCS1Q01581 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC5.99□□□□□ -1.45
HMGCS1Q01581 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
HMGCS1Q01581 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
HMGCS1Q01581 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.98□□□□□ -1.45
HMGCS1Q01581 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC5.98□□□□□ -1.45
HMGCS1Q01581 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC5.98□□□□□ -1.45
HMGCS1Q01581 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
HMGCS1Q01581 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
HMGCS1Q01581 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC5.98□□□□□ -1.45
HMGCS1Q01581 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
HMGCS1Q01581 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
HMGCS1Q01581 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5.98□□□□□ -1.45
HMGCS1Q01581 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
HMGCS1Q01581 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
HMGCS1Q01581 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
HMGCS1Q01581 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
HMGCS1Q01581 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
HMGCS1Q01581 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
HMGCS1Q01581 METTL5-202ENST00000308099 629 ntTSL 3 BASIC5.98□□□□□ -1.45
HMGCS1Q01581 SNORA43.1-201ENST00000364863 140 ntBASIC5.98□□□□□ -1.45
HMGCS1Q01581 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
HMGCS1Q01581 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC5.98□□□□□ -1.45
HMGCS1Q01581 RN7SKP151-201ENST00000410230 316 ntBASIC5.98□□□□□ -1.45
HMGCS1Q01581 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
HMGCS1Q01581 RPL21P50-201ENST00000417698 477 ntBASIC5.98□□□□□ -1.45
HMGCS1Q01581 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC5.98□□□□□ -1.45
HMGCS1Q01581 GPN3P1-201ENST00000423883 535 ntBASIC5.98□□□□□ -1.45
HMGCS1Q01581 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC5.98□□□□□ -1.45
HMGCS1Q01581 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC5.98□□□□□ -1.45
HMGCS1Q01581 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC5.98□□□□□ -1.45
HMGCS1Q01581 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC5.98□□□□□ -1.45
HMGCS1Q01581 H3F3BP1-201ENST00000440551 403 ntBASIC5.98□□□□□ -1.45
HMGCS1Q01581 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC5.98□□□□□ -1.45
HMGCS1Q01581 AC092601.1-201ENST00000444526 383 ntBASIC5.98□□□□□ -1.45
HMGCS1Q01581 RPS18P1-201ENST00000447840 458 ntBASIC5.98□□□□□ -1.45
HMGCS1Q01581 KF459542.1-201ENST00000450908 553 ntBASIC5.98□□□□□ -1.45
HMGCS1Q01581 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC5.98□□□□□ -1.45
HMGCS1Q01581 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC5.98□□□□□ -1.45
HMGCS1Q01581 RARRES2P3-201ENST00000457739 473 ntBASIC5.98□□□□□ -1.45
HMGCS1Q01581 AC004890.1-201ENST00000461005 181 ntBASIC5.98□□□□□ -1.45
HMGCS1Q01581 RN7SL39P-201ENST00000462264 297 ntBASIC5.98□□□□□ -1.45
HMGCS1Q01581 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC5.98□□□□□ -1.45
HMGCS1Q01581 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
HMGCS1Q01581 RNA5SP206-201ENST00000516703 121 ntBASIC5.98□□□□□ -1.45
HMGCS1Q01581 AC116158.2-201ENST00000559544 553 ntTSL 4 BASIC5.98□□□□□ -1.45
HMGCS1Q01581 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC5.98□□□□□ -1.45
HMGCS1Q01581 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC5.98□□□□□ -1.45
HMGCS1Q01581 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC5.98□□□□□ -1.45
HMGCS1Q01581 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC5.98□□□□□ -1.45
HMGCS1Q01581 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
HMGCS1Q01581 AL133243.2-201ENST00000610331 1621 ntBASIC5.98□□□□□ -1.45
HMGCS1Q01581 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
HMGCS1Q01581 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
HMGCS1Q01581 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC5.98□□□□□ -1.45
HMGCS1Q01581 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
HMGCS1Q01581 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC5.98□□□□□ -1.45
HMGCS1Q01581 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC5.98□□□□□ -1.45
HMGCS1Q01581 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC5.98□□□□□ -1.45
HMGCS1Q01581 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.98□□□□□ -1.45
HMGCS1Q01581 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
HMGCS1Q01581 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC5.98□□□□□ -1.45
HMGCS1Q01581 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
HMGCS1Q01581 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
HMGCS1Q01581 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC5.98□□□□□ -1.45
HMGCS1Q01581 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
HMGCS1Q01581 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
HMGCS1Q01581 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
HMGCS1Q01581 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
HMGCS1Q01581 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms