Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CX3CL1P78423 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CX3CL1P78423 MIR365B-201ENST00000362317 111 ntBASIC5.27□□□□□ -1.57
CX3CL1P78423 RGS5-202ENST00000367903 934 ntTSL 3 BASIC5.27□□□□□ -1.57
CX3CL1P78423 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
CX3CL1P78423 RNU6-316P-201ENST00000391027 107 ntBASIC5.27□□□□□ -1.57
CX3CL1P78423 RNU11-6P-201ENST00000391127 133 ntBASIC5.27□□□□□ -1.57
CX3CL1P78423 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC5.27□□□□□ -1.57
CX3CL1P78423 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
CX3CL1P78423 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC5.27□□□□□ -1.57
CX3CL1P78423 AL590635.1-201ENST00000406314 586 ntBASIC5.27□□□□□ -1.57
CX3CL1P78423 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CX3CL1P78423 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CX3CL1P78423 TRIM60P17-201ENST00000415181 719 ntBASIC5.27□□□□□ -1.57
CX3CL1P78423 PTPN2P1-201ENST00000423212 1072 ntBASIC5.27□□□□□ -1.57
CX3CL1P78423 AL596268.1-201ENST00000427910 1048 ntBASIC5.27□□□□□ -1.57
CX3CL1P78423 E2F6P1-201ENST00000428850 745 ntBASIC5.27□□□□□ -1.57
CX3CL1P78423 MRPS33P4-201ENST00000434892 317 ntBASIC5.27□□□□□ -1.57
CX3CL1P78423 ATP6V1G1P4-201ENST00000438388 335 ntBASIC5.27□□□□□ -1.57
CX3CL1P78423 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CX3CL1P78423 AC106874.1-201ENST00000440495 646 ntTSL 3 BASIC5.27□□□□□ -1.57
CX3CL1P78423 E2F6P3-201ENST00000441743 743 ntBASIC5.27□□□□□ -1.57
CX3CL1P78423 TXNP2-201ENST00000443918 295 ntBASIC5.27□□□□□ -1.57
CX3CL1P78423 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CX3CL1P78423 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC5.27□□□□□ -1.57
CX3CL1P78423 TVP23CP1-201ENST00000450317 639 ntBASIC5.27□□□□□ -1.57
CX3CL1P78423 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC5.27□□□□□ -1.57
CX3CL1P78423 TFP1-201ENST00000460564 572 ntTSL 4 BASIC5.27□□□□□ -1.57
CX3CL1P78423 MRPS33-203ENST00000467334 622 ntTSL 2 BASIC5.27□□□□□ -1.57
CX3CL1P78423 AC022336.1-201ENST00000475510 337 ntBASIC5.27□□□□□ -1.57
CX3CL1P78423 TFP1-203ENST00000490470 561 ntTSL 4 BASIC5.27□□□□□ -1.57
CX3CL1P78423 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC5.27□□□□□ -1.57
CX3CL1P78423 AC083906.1-201ENST00000509298 406 ntBASIC5.27□□□□□ -1.57
CX3CL1P78423 AC094105.1-201ENST00000509745 560 ntTSL 4 BASIC5.27□□□□□ -1.57
CX3CL1P78423 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC5.27□□□□□ -1.57
CX3CL1P78423 RN7SKP67-201ENST00000515905 235 ntBASIC5.27□□□□□ -1.57
CX3CL1P78423 RN7SKP196-201ENST00000516267 345 ntBASIC5.27□□□□□ -1.57
CX3CL1P78423 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC5.27□□□□□ -1.57
CX3CL1P78423 PVT1-214ENST00000522875 922 ntTSL 5 BASIC5.27□□□□□ -1.57
CX3CL1P78423 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC5.27□□□□□ -1.57
CX3CL1P78423 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC5.27□□□□□ -1.57
CX3CL1P78423 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC5.27□□□□□ -1.57
CX3CL1P78423 AC068408.1-201ENST00000577406 1144 ntBASIC5.27□□□□□ -1.57
CX3CL1P78423 CCDC58P1-201ENST00000578567 430 ntBASIC5.27□□□□□ -1.57
CX3CL1P78423 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC5.27□□□□□ -1.57
CX3CL1P78423 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC5.27□□□□□ -1.57
CX3CL1P78423 AL049840.5-201ENST00000602827 552 ntBASIC5.27□□□□□ -1.57
CX3CL1P78423 AC084036.1-201ENST00000609190 508 ntBASIC5.27□□□□□ -1.57
CX3CL1P78423 AC097467.3-215ENST00000609486 793 ntTSL 5 BASIC5.27□□□□□ -1.57
CX3CL1P78423 AC097467.3-214ENST00000610249 843 ntTSL 5 BASIC5.27□□□□□ -1.57
CX3CL1P78423 AL138960.1-201ENST00000613838 513 ntBASIC5.27□□□□□ -1.57
CX3CL1P78423 AC012653.2-201ENST00000621880 420 ntBASIC5.27□□□□□ -1.57
CX3CL1P78423 AC005514.1-201ENST00000623521 208 ntBASIC5.27□□□□□ -1.57
CX3CL1P78423 AC012254.5-201ENST00000623573 478 ntBASIC5.27□□□□□ -1.57
CX3CL1P78423 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC5.27□□□□□ -1.57
CX3CL1P78423 AC103798.2-201ENST00000624292 632 ntBASIC5.27□□□□□ -1.57
CX3CL1P78423 AL035425.4-201ENST00000624509 1063 ntBASIC5.27□□□□□ -1.57
CX3CL1P78423 MAPK10-350ENST00000641777 965 ntBASIC5.27□□□□□ -1.57
CX3CL1P78423 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
CX3CL1P78423 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
CX3CL1P78423 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC5.27□□□□□ -1.57
CX3CL1P78423 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
CX3CL1P78423 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CX3CL1P78423 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CX3CL1P78423 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CX3CL1P78423 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
CX3CL1P78423 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CX3CL1P78423 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC5.27□□□□□ -1.57
CX3CL1P78423 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
CX3CL1P78423 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC5.26□□□□□ -1.57
CX3CL1P78423 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC5.26□□□□□ -1.57
CX3CL1P78423 MAP3K19-206ENST00000392918 1460 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CX3CL1P78423 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
CX3CL1P78423 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CX3CL1P78423 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
CX3CL1P78423 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC5.26□□□□□ -1.57
CX3CL1P78423 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.26□□□□□ -1.57
CX3CL1P78423 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CX3CL1P78423 RNA5SP514-201ENST00000363717 111 ntBASIC5.26□□□□□ -1.57
CX3CL1P78423 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
CX3CL1P78423 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC5.26□□□□□ -1.57
CX3CL1P78423 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CX3CL1P78423 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC5.26□□□□□ -1.57
CX3CL1P78423 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC5.26□□□□□ -1.57
CX3CL1P78423 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CX3CL1P78423 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC5.26□□□□□ -1.57
CX3CL1P78423 AC013470.3-201ENST00000420252 1194 ntBASIC5.26□□□□□ -1.57
CX3CL1P78423 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC5.26□□□□□ -1.57
CX3CL1P78423 NPM1P26-201ENST00000426339 738 ntBASIC5.26□□□□□ -1.57
CX3CL1P78423 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CX3CL1P78423 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC5.26□□□□□ -1.57
CX3CL1P78423 MTND4P15-201ENST00000437913 1033 ntBASIC5.26□□□□□ -1.57
CX3CL1P78423 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC5.26□□□□□ -1.57
CX3CL1P78423 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC5.26□□□□□ -1.57
CX3CL1P78423 BBOF1-202ENST00000463558 550 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
CX3CL1P78423 RN7SL70P-201ENST00000478322 302 ntBASIC5.26□□□□□ -1.57
CX3CL1P78423 RPS26P24-201ENST00000497656 331 ntBASIC5.26□□□□□ -1.57
CX3CL1P78423 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
CX3CL1P78423 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
CX3CL1P78423 MINOS1P4-201ENST00000515470 318 ntBASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms