Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC6.14□□□□□ -1.43
RAE1P78406 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
RAE1P78406 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
RAE1P78406 AC087565.3-202ENST00000642085 1603 ntBASIC6.14□□□□□ -1.43
RAE1P78406 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC6.14□□□□□ -1.43
RAE1P78406 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC6.14□□□□□ -1.43
RAE1P78406 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
RAE1P78406 AL513548.1-201ENST00000562904 1724 ntBASIC6.14□□□□□ -1.43
RAE1P78406 CUBNP3-201ENST00000457461 1784 ntBASIC6.14□□□□□ -1.43
RAE1P78406 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
RAE1P78406 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
RAE1P78406 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
RAE1P78406 AC010894.1-201ENST00000313760 361 ntBASIC6.14□□□□□ -1.43
RAE1P78406 TP63-205ENST00000392461 1251 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
RAE1P78406 AC096644.3-201ENST00000416788 338 ntBASIC6.14□□□□□ -1.43
RAE1P78406 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC6.14□□□□□ -1.43
RAE1P78406 COL11A2P1-205ENST00000441798 676 ntBASIC6.14□□□□□ -1.43
RAE1P78406 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC6.14□□□□□ -1.43
RAE1P78406 FAM155A-IT1-201ENST00000449551 819 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
RAE1P78406 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC6.14□□□□□ -1.43
RAE1P78406 SNX18P26-201ENST00000458433 740 ntBASIC6.14□□□□□ -1.43
RAE1P78406 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC6.14□□□□□ -1.43
RAE1P78406 AL079303.1-201ENST00000486611 463 ntBASIC6.14□□□□□ -1.43
RAE1P78406 AC009567.2-201ENST00000502989 349 ntBASIC6.14□□□□□ -1.43
RAE1P78406 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC6.14□□□□□ -1.43
RAE1P78406 AC093870.1-201ENST00000506837 213 ntBASIC6.14□□□□□ -1.43
RAE1P78406 IQCH-203ENST00000512104 1000 ntTSL 2 BASIC6.14□□□□□ -1.43
RAE1P78406 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC6.14□□□□□ -1.43
RAE1P78406 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC6.14□□□□□ -1.43
RAE1P78406 AC010374.2-201ENST00000512933 535 ntBASIC6.14□□□□□ -1.43
RAE1P78406 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC6.14□□□□□ -1.43
RAE1P78406 RNA5SP96-201ENST00000516041 107 ntBASIC6.14□□□□□ -1.43
RAE1P78406 AC010834.1-201ENST00000517998 696 ntTSL 2 BASIC6.14□□□□□ -1.43
RAE1P78406 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC6.14□□□□□ -1.43
RAE1P78406 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC6.14□□□□□ -1.43
RAE1P78406 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC6.14□□□□□ -1.43
RAE1P78406 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC6.14□□□□□ -1.43
RAE1P78406 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC6.14□□□□□ -1.43
RAE1P78406 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC6.14□□□□□ -1.43
RAE1P78406 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC6.14□□□□□ -1.43
RAE1P78406 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC6.14□□□□□ -1.43
RAE1P78406 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC6.14□□□□□ -1.43
RAE1P78406 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC6.14□□□□□ -1.43
RAE1P78406 AC027281.1-201ENST00000574178 758 ntBASIC6.14□□□□□ -1.43
RAE1P78406 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC6.14□□□□□ -1.43
RAE1P78406 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC6.14□□□□□ -1.43
RAE1P78406 AC233702.7-202ENST00000582941 211 ntBASIC6.14□□□□□ -1.43
RAE1P78406 MIR4760-201ENST00000585040 80 ntBASIC6.14□□□□□ -1.43
RAE1P78406 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC6.14□□□□□ -1.43
RAE1P78406 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC6.14□□□□□ -1.43
RAE1P78406 PRL-202ENST00000615510 1268 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
RAE1P78406 AC090772.4-201ENST00000623599 362 ntBASIC6.14□□□□□ -1.43
RAE1P78406 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC6.14□□□□□ -1.43
RAE1P78406 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC6.14□□□□□ -1.43
RAE1P78406 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
RAE1P78406 HSPA8P19-201ENST00000505359 1517 ntBASIC6.14□□□□□ -1.43
RAE1P78406 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
RAE1P78406 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC6.14□□□□□ -1.43
RAE1P78406 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC6.14□□□□□ -1.43
RAE1P78406 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
RAE1P78406 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC6.13□□□□□ -1.43
RAE1P78406 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
RAE1P78406 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC6.13□□□□□ -1.43
RAE1P78406 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
RAE1P78406 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
RAE1P78406 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC6.13□□□□□ -1.43
RAE1P78406 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC6.13□□□□□ -1.43
RAE1P78406 CCDC150P1-201ENST00000537123 2215 ntBASIC6.13□□□□□ -1.43
RAE1P78406 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
RAE1P78406 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
RAE1P78406 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
RAE1P78406 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
RAE1P78406 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
RAE1P78406 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
RAE1P78406 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
RAE1P78406 SEC61G-201ENST00000352861 462 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
RAE1P78406 RNA5SP350-201ENST00000363298 111 ntBASIC6.13□□□□□ -1.43
RAE1P78406 SNORD35A-201ENST00000363389 86 ntBASIC6.13□□□□□ -1.43
RAE1P78406 AL353625.1-202ENST00000366273 571 ntBASIC6.13□□□□□ -1.43
RAE1P78406 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC6.13□□□□□ -1.43
RAE1P78406 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
RAE1P78406 SNORA7A-201ENST00000384765 139 ntBASIC6.13□□□□□ -1.43
RAE1P78406 AL391419.1-201ENST00000398901 1275 ntBASIC6.13□□□□□ -1.43
RAE1P78406 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC6.13□□□□□ -1.43
RAE1P78406 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC6.13□□□□□ -1.43
RAE1P78406 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC6.13□□□□□ -1.43
RAE1P78406 AP003385.1-201ENST00000426387 893 ntBASIC6.13□□□□□ -1.43
RAE1P78406 AC083862.1-201ENST00000427378 1242 ntBASIC6.13□□□□□ -1.43
RAE1P78406 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC6.13□□□□□ -1.43
RAE1P78406 BMS1P11-201ENST00000442351 885 ntBASIC6.13□□□□□ -1.43
RAE1P78406 VN1R38P-201ENST00000450265 887 ntBASIC6.13□□□□□ -1.43
RAE1P78406 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
RAE1P78406 FCF1P6-201ENST00000456841 595 ntBASIC6.13□□□□□ -1.43
RAE1P78406 BMS1P9-201ENST00000457640 885 ntBASIC6.13□□□□□ -1.43
RAE1P78406 BBOF1-202ENST00000463558 550 ntAPPRIS ALT2 TSL 2 BASIC6.13□□□□□ -1.43
RAE1P78406 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC6.13□□□□□ -1.43
RAE1P78406 RN7SL165P-201ENST00000477476 291 ntBASIC6.13□□□□□ -1.43
RAE1P78406 AC092902.1-201ENST00000486999 259 ntBASIC6.13□□□□□ -1.43
RAE1P78406 RPL24-206ENST00000495401 478 ntTSL 2 BASIC6.13□□□□□ -1.43
RAE1P78406 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms