Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC5.54□□□□□ -1.52
VBP1P61758 AC099670.2-201ENST00000435130 321 ntBASIC5.54□□□□□ -1.52
VBP1P61758 LINC00444-201ENST00000435617 215 ntTSL 5 BASIC5.54□□□□□ -1.52
VBP1P61758 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC5.54□□□□□ -1.52
VBP1P61758 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC5.54□□□□□ -1.52
VBP1P61758 AL606804.1-202ENST00000446347 481 ntTSL 2 BASIC5.54□□□□□ -1.52
VBP1P61758 HIST1H2APS6-201ENST00000448609 364 ntBASIC5.54□□□□□ -1.52
VBP1P61758 AC019080.2-201ENST00000453859 394 ntBASIC5.54□□□□□ -1.52
VBP1P61758 AC008620.1-201ENST00000468453 592 ntBASIC5.54□□□□□ -1.52
VBP1P61758 RN7SL390P-201ENST00000470634 284 ntBASIC5.54□□□□□ -1.52
VBP1P61758 SCARNA5-201ENST00000516201 276 ntBASIC5.54□□□□□ -1.52
VBP1P61758 snoU109.5-201ENST00000516231 132 ntBASIC5.54□□□□□ -1.52
VBP1P61758 AP000873.2-209ENST00000528083 547 ntTSL 4 BASIC5.54□□□□□ -1.52
VBP1P61758 AC024145.1-201ENST00000535324 775 ntTSL 3 BASIC5.54□□□□□ -1.52
VBP1P61758 AC137767.1-202ENST00000543072 752 ntTSL 2 BASIC5.54□□□□□ -1.52
VBP1P61758 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.54□□□□□ -1.52
VBP1P61758 AC019322.1-201ENST00000571869 389 ntBASIC5.54□□□□□ -1.52
VBP1P61758 AC020916.2-201ENST00000591242 360 ntBASIC5.54□□□□□ -1.52
VBP1P61758 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC5.54□□□□□ -1.52
VBP1P61758 SRD5A3-AS1-212ENST00000601433 754 ntTSL 5 BASIC5.54□□□□□ -1.52
VBP1P61758 AC006924.1-201ENST00000610750 559 ntBASIC5.54□□□□□ -1.52
VBP1P61758 PART1_3.1-201ENST00000619680 131 ntBASIC5.54□□□□□ -1.52
VBP1P61758 CYP2C8-213ENST00000628935 924 ntTSL 5 BASIC5.54□□□□□ -1.52
VBP1P61758 OR5AU1-204ENST00000641822 1197 ntBASIC5.54□□□□□ -1.52
VBP1P61758 AC079776.5-201ENST00000641920 211 ntBASIC5.54□□□□□ -1.52
VBP1P61758 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC5.54□□□□□ -1.52
VBP1P61758 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
VBP1P61758 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
VBP1P61758 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.54□□□□□ -1.52
VBP1P61758 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC5.54□□□□□ -1.52
VBP1P61758 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
VBP1P61758 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
VBP1P61758 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
VBP1P61758 CASC19-248ENST00000641674 1356 ntBASIC5.54□□□□□ -1.52
VBP1P61758 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
VBP1P61758 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.53□□□□□ -1.52
VBP1P61758 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.53□□□□□ -1.52
VBP1P61758 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.53□□□□□ -1.52
VBP1P61758 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
VBP1P61758 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
VBP1P61758 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
VBP1P61758 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
VBP1P61758 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
VBP1P61758 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.53□□□□□ -1.52
VBP1P61758 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
VBP1P61758 C5orf63-201ENST00000296662 966 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
VBP1P61758 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
VBP1P61758 RNA5SP302-201ENST00000364896 100 ntBASIC5.53□□□□□ -1.52
VBP1P61758 AC068389.3-201ENST00000373384 529 ntTSL 4 BASIC5.53□□□□□ -1.52
VBP1P61758 IGFL2-201ENST00000377693 607 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
VBP1P61758 TRAV12-3-201ENST00000390442 399 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
VBP1P61758 AL445238.1-204ENST00000400311 463 ntBASIC5.53□□□□□ -1.52
VBP1P61758 AL158827.1-201ENST00000416300 391 ntBASIC5.53□□□□□ -1.52
VBP1P61758 AL353611.1-201ENST00000417054 462 ntTSL 5 BASIC5.53□□□□□ -1.52
VBP1P61758 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC5.53□□□□□ -1.52
VBP1P61758 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC5.53□□□□□ -1.52
VBP1P61758 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC5.53□□□□□ -1.52
VBP1P61758 KCNQ5-AS1-201ENST00000429832 1101 ntTSL 5 BASIC5.53□□□□□ -1.52
VBP1P61758 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.53□□□□□ -1.52
VBP1P61758 MTND2P40-201ENST00000436718 841 ntBASIC5.53□□□□□ -1.52
VBP1P61758 RPL29P7-201ENST00000440227 457 ntBASIC5.53□□□□□ -1.52
VBP1P61758 SNRPBP1-201ENST00000443634 282 ntBASIC5.53□□□□□ -1.52
VBP1P61758 RPL7AP71-201ENST00000451120 739 ntBASIC5.53□□□□□ -1.52
VBP1P61758 AL133480.2-201ENST00000456723 487 ntBASIC5.53□□□□□ -1.52
VBP1P61758 AC123768.1-202ENST00000460684 461 ntTSL 3 BASIC5.53□□□□□ -1.52
VBP1P61758 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC5.53□□□□□ -1.52
VBP1P61758 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC5.53□□□□□ -1.52
VBP1P61758 AC131392.1-201ENST00000506490 633 ntBASIC5.53□□□□□ -1.52
VBP1P61758 AC092336.1-201ENST00000510562 415 ntTSL 3 BASIC5.53□□□□□ -1.52
VBP1P61758 AC023794.3-204ENST00000510754 236 ntBASIC5.53□□□□□ -1.52
VBP1P61758 AC098487.1-203ENST00000512915 546 ntTSL 5 BASIC5.53□□□□□ -1.52
VBP1P61758 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5.53□□□□□ -1.52
VBP1P61758 AC012574.1-201ENST00000523874 252 ntTSL 5 BASIC5.53□□□□□ -1.52
VBP1P61758 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC5.53□□□□□ -1.52
VBP1P61758 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.53□□□□□ -1.52
VBP1P61758 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC5.53□□□□□ -1.52
VBP1P61758 OR8Q1P-201ENST00000526467 655 ntBASIC5.53□□□□□ -1.52
VBP1P61758 AP005328.1-201ENST00000577719 681 ntTSL 3 BASIC5.53□□□□□ -1.52
VBP1P61758 RN7SL192P-201ENST00000584303 299 ntBASIC5.53□□□□□ -1.52
VBP1P61758 Z99289.1-201ENST00000585373 807 ntTSL 3 BASIC5.53□□□□□ -1.52
VBP1P61758 AC060780.2-201ENST00000589047 198 ntBASIC5.53□□□□□ -1.52
VBP1P61758 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
VBP1P61758 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.53□□□□□ -1.52
VBP1P61758 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
VBP1P61758 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
VBP1P61758 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
VBP1P61758 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
VBP1P61758 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
VBP1P61758 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.53□□□□□ -1.52
VBP1P61758 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
VBP1P61758 LRRC37A15P-201ENST00000514785 1355 ntBASIC5.53□□□□□ -1.52
VBP1P61758 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
VBP1P61758 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
VBP1P61758 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC5.53□□□□□ -1.52
VBP1P61758 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.52□□□□□ -1.53
VBP1P61758 AL031595.2-201ENST00000624215 19071 ntBASIC5.52□□□□□ -1.53
VBP1P61758 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC5.52□□□□□ -1.53
VBP1P61758 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
VBP1P61758 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
VBP1P61758 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms