Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 AC003035.2-201ENST00000448948 696 ntTSL 3 BASIC5.44□□□□□ -1.54
ACTBP60709 AC016822.1-201ENST00000457975 439 ntTSL 3 BASIC5.44□□□□□ -1.54
ACTBP60709 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
ACTBP60709 AC022206.1-201ENST00000495947 347 ntBASIC5.44□□□□□ -1.54
ACTBP60709 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC5.44□□□□□ -1.54
ACTBP60709 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.44□□□□□ -1.54
ACTBP60709 AC114956.3-202ENST00000505645 482 ntTSL 5 BASIC5.44□□□□□ -1.54
ACTBP60709 AC068721.1-201ENST00000507156 583 ntTSL 5 BASIC5.44□□□□□ -1.54
ACTBP60709 CFI-204ENST00000510800 667 ntTSL 2 BASIC5.44□□□□□ -1.54
ACTBP60709 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC5.44□□□□□ -1.54
ACTBP60709 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC5.44□□□□□ -1.54
ACTBP60709 AP005902.2-201ENST00000518393 307 ntBASIC5.44□□□□□ -1.54
ACTBP60709 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
ACTBP60709 AC044839.3-201ENST00000532068 860 ntTSL 3 BASIC5.44□□□□□ -1.54
ACTBP60709 ACER3-213ENST00000533873 929 ntTSL 2 BASIC5.44□□□□□ -1.54
ACTBP60709 AC005833.3-202ENST00000544741 770 ntAPPRIS P1 TSL 3 BASIC5.44□□□□□ -1.54
ACTBP60709 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
ACTBP60709 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC5.44□□□□□ -1.54
ACTBP60709 ANP32BP1-202ENST00000568553 737 ntBASIC5.44□□□□□ -1.54
ACTBP60709 AC090774.2-201ENST00000584708 322 ntBASIC5.44□□□□□ -1.54
ACTBP60709 MIR7515HG-250ENST00000592565 856 ntTSL 5 BASIC5.44□□□□□ -1.54
ACTBP60709 AC097467.3-210ENST00000597939 705 ntTSL 5 BASIC5.44□□□□□ -1.54
ACTBP60709 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC5.44□□□□□ -1.54
ACTBP60709 AC093635.1-201ENST00000609028 555 ntBASIC5.44□□□□□ -1.54
ACTBP60709 DAPL1-204ENST00000621326 671 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
ACTBP60709 AC027506.1-201ENST00000621395 198 ntBASIC5.44□□□□□ -1.54
ACTBP60709 AC099654.11-201ENST00000638857 294 ntBASIC5.44□□□□□ -1.54
ACTBP60709 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
ACTBP60709 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
ACTBP60709 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
ACTBP60709 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
ACTBP60709 DTNA-221ENST00000591182 1787 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
ACTBP60709 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
ACTBP60709 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.44□□□□□ -1.54
ACTBP60709 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
ACTBP60709 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
ACTBP60709 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
ACTBP60709 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
ACTBP60709 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.44□□□□□ -1.54
ACTBP60709 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC5.44□□□□□ -1.54
ACTBP60709 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC5.44□□□□□ -1.54
ACTBP60709 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC5.44□□□□□ -1.54
ACTBP60709 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
ACTBP60709 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.43□□□□□ -1.54
ACTBP60709 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.43□□□□□ -1.54
ACTBP60709 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.43□□□□□ -1.54
ACTBP60709 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC5.43□□□□□ -1.54
ACTBP60709 AC025470.1-201ENST00000510053 2032 ntBASIC5.43□□□□□ -1.54
ACTBP60709 AL137141.1-201ENST00000624622 4836 ntBASIC5.43□□□□□ -1.54
ACTBP60709 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
ACTBP60709 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
ACTBP60709 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
ACTBP60709 TRIM75P-201ENST00000503032 1407 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
ACTBP60709 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.43□□□□□ -1.54
ACTBP60709 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
ACTBP60709 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC5.43□□□□□ -1.54
ACTBP60709 VTRNA3-1P-201ENST00000362552 102 ntBASIC5.43□□□□□ -1.54
ACTBP60709 OR10R2-201ENST00000368152 1008 ntAPPRIS P2 BASIC5.43□□□□□ -1.54
ACTBP60709 NOX1-203ENST00000372964 661 ntTSL 2 BASIC5.43□□□□□ -1.54
ACTBP60709 MIR27A-201ENST00000385073 78 ntBASIC5.43□□□□□ -1.54
ACTBP60709 UBBP1-201ENST00000392399 473 ntBASIC5.43□□□□□ -1.54
ACTBP60709 ZNF705B-201ENST00000400120 1207 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
ACTBP60709 AL121977.1-201ENST00000401636 979 ntBASIC5.43□□□□□ -1.54
ACTBP60709 AL359694.1-201ENST00000403247 604 ntBASIC5.43□□□□□ -1.54
ACTBP60709 RNA5SP231-201ENST00000410496 138 ntBASIC5.43□□□□□ -1.54
ACTBP60709 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC5.43□□□□□ -1.54
ACTBP60709 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC5.43□□□□□ -1.54
ACTBP60709 AL365220.1-201ENST00000432923 399 ntBASIC5.43□□□□□ -1.54
ACTBP60709 RPS10P14-201ENST00000440748 502 ntBASIC5.43□□□□□ -1.54
ACTBP60709 AL356133.1-201ENST00000444762 372 ntBASIC5.43□□□□□ -1.54
ACTBP60709 LINC01832-201ENST00000446520 553 ntTSL 4 BASIC5.43□□□□□ -1.54
ACTBP60709 AC026391.1-201ENST00000450677 537 ntTSL 3 BASIC5.43□□□□□ -1.54
ACTBP60709 RPL7AP71-201ENST00000451120 739 ntBASIC5.43□□□□□ -1.54
ACTBP60709 AC093895.1-201ENST00000506480 821 ntTSL 3 BASIC5.43□□□□□ -1.54
ACTBP60709 AL358292.1-201ENST00000554181 412 ntTSL 2 BASIC5.43□□□□□ -1.54
ACTBP60709 AC013652.1-204ENST00000558209 489 ntTSL 3 BASIC5.43□□□□□ -1.54
ACTBP60709 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC5.43□□□□□ -1.54
ACTBP60709 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC5.43□□□□□ -1.54
ACTBP60709 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.43□□□□□ -1.54
ACTBP60709 RN7SL208P-201ENST00000577964 296 ntBASIC5.43□□□□□ -1.54
ACTBP60709 AC019131.1-201ENST00000583654 622 ntTSL 5 BASIC5.43□□□□□ -1.54
ACTBP60709 ZNF431-203ENST00000594425 610 ntTSL 2 BASIC5.43□□□□□ -1.54
ACTBP60709 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC5.43□□□□□ -1.54
ACTBP60709 ZNF677-211ENST00000601828 719 ntTSL 2 BASIC5.43□□□□□ -1.54
ACTBP60709 AL512430.4-201ENST00000603085 613 ntBASIC5.43□□□□□ -1.54
ACTBP60709 DIMT1P1-201ENST00000603970 763 ntBASIC5.43□□□□□ -1.54
ACTBP60709 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC5.43□□□□□ -1.54
ACTBP60709 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC5.43□□□□□ -1.54
ACTBP60709 AC005355.2-201ENST00000625064 484 ntBASIC5.43□□□□□ -1.54
ACTBP60709 Z83818.2-201ENST00000635331 433 ntTSL 3 BASIC5.43□□□□□ -1.54
ACTBP60709 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
ACTBP60709 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC5.43□□□□□ -1.54
ACTBP60709 AC027575.3-201ENST00000583058 2747 ntBASIC5.43□□□□□ -1.54
ACTBP60709 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.43□□□□□ -1.54
ACTBP60709 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.43□□□□□ -1.54
ACTBP60709 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
ACTBP60709 AC026523.2-201ENST00000625039 7739 ntBASIC5.43□□□□□ -1.54
ACTBP60709 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC5.43□□□□□ -1.54
ACTBP60709 MS4A6A-213ENST00000530839 1383 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
ACTBP60709 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms