Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC8.17□□□□□ -1.1
RIPK4P57078 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC8.17□□□□□ -1.1
RIPK4P57078 MTND4LP17-201ENST00000414607 293 ntBASIC8.17□□□□□ -1.1
RIPK4P57078 AC016908.1-201ENST00000442571 1219 ntBASIC8.17□□□□□ -1.1
RIPK4P57078 GAPDHP23-201ENST00000444823 993 ntBASIC8.17□□□□□ -1.1
RIPK4P57078 FTH1P8-201ENST00000498161 514 ntBASIC8.17□□□□□ -1.1
RIPK4P57078 RN7SKP35-201ENST00000517210 151 ntBASIC8.17□□□□□ -1.1
RIPK4P57078 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC8.17□□□□□ -1.1
RIPK4P57078 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC8.17□□□□□ -1.1
RIPK4P57078 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC8.17□□□□□ -1.1
RIPK4P57078 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC8.17□□□□□ -1.1
RIPK4P57078 AC134669.1-201ENST00000581275 672 ntBASIC8.17□□□□□ -1.1
RIPK4P57078 DYNLL1P1-201ENST00000595442 269 ntBASIC8.17□□□□□ -1.1
RIPK4P57078 AC091167.5-201ENST00000605689 894 ntBASIC8.17□□□□□ -1.1
RIPK4P57078 OR7A1P-202ENST00000641542 1158 ntBASIC8.17□□□□□ -1.1
RIPK4P57078 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC8.17□□□□□ -1.1
RIPK4P57078 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
RIPK4P57078 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
RIPK4P57078 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
RIPK4P57078 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
RIPK4P57078 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
RIPK4P57078 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC8.17□□□□□ -1.1
RIPK4P57078 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
RIPK4P57078 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
RIPK4P57078 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
RIPK4P57078 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC8.16□□□□□ -1.1
RIPK4P57078 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
RIPK4P57078 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
RIPK4P57078 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC8.16□□□□□ -1.1
RIPK4P57078 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC8.16□□□□□ -1.1
RIPK4P57078 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC8.16□□□□□ -1.1
RIPK4P57078 SNORA43.1-201ENST00000364863 140 ntBASIC8.16□□□□□ -1.1
RIPK4P57078 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC8.16□□□□□ -1.1
RIPK4P57078 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
RIPK4P57078 AL451142.1-201ENST00000375867 775 ntBASIC8.16□□□□□ -1.1
RIPK4P57078 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
RIPK4P57078 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC8.16□□□□□ -1.1
RIPK4P57078 RNU11-6P-201ENST00000391127 133 ntBASIC8.16□□□□□ -1.1
RIPK4P57078 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC8.16□□□□□ -1.1
RIPK4P57078 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
RIPK4P57078 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
RIPK4P57078 IGLV3-4-201ENST00000432300 244 ntBASIC8.16□□□□□ -1.1
RIPK4P57078 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC8.16□□□□□ -1.1
RIPK4P57078 OR52I1-201ENST00000450052 1050 ntBASIC8.16□□□□□ -1.1
RIPK4P57078 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC8.16□□□□□ -1.1
RIPK4P57078 RPS27AP3-201ENST00000453803 454 ntBASIC8.16□□□□□ -1.1
RIPK4P57078 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC8.16□□□□□ -1.1
RIPK4P57078 AC104966.1-201ENST00000467010 1464 ntBASIC8.16□□□□□ -1.1
RIPK4P57078 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC8.16□□□□□ -1.1
RIPK4P57078 EEF1A1P9-201ENST00000514975 1383 ntBASIC8.16□□□□□ -1.1
RIPK4P57078 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
RIPK4P57078 AP005639.1-201ENST00000526939 192 ntBASIC8.16□□□□□ -1.1
RIPK4P57078 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC8.16□□□□□ -1.1
RIPK4P57078 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC8.16□□□□□ -1.1
RIPK4P57078 TEX41-218ENST00000596540 882 ntTSL 5 BASIC8.16□□□□□ -1.1
RIPK4P57078 AC011462.3-201ENST00000598988 540 ntTSL 3 BASIC8.16□□□□□ -1.1
RIPK4P57078 AC011497.2-201ENST00000600255 639 ntBASIC8.16□□□□□ -1.1
RIPK4P57078 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC8.16□□□□□ -1.1
RIPK4P57078 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC8.16□□□□□ -1.1
RIPK4P57078 AL009031.1-202ENST00000632370 886 ntTSL 3 BASIC8.16□□□□□ -1.1
RIPK4P57078 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC8.16□□□□□ -1.1
RIPK4P57078 AC010401.2-201ENST00000575137 4934 ntBASIC8.16□□□□□ -1.1
RIPK4P57078 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC8.16□□□□□ -1.1
RIPK4P57078 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
RIPK4P57078 ZNF402P-201ENST00000404435 3100 ntBASIC8.16□□□□□ -1.1
RIPK4P57078 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC8.15□□□□□ -1.1
RIPK4P57078 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
RIPK4P57078 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC8.15□□□□□ -1.1
RIPK4P57078 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
RIPK4P57078 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
RIPK4P57078 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.1
RIPK4P57078 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC8.15□□□□□ -1.1
RIPK4P57078 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
RIPK4P57078 LIMCH1-201ENST00000313860 6165 ntAPPRIS P3 TSL 1 (best) BASIC8.15□□□□□ -1.1
RIPK4P57078 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
RIPK4P57078 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC8.15□□□□□ -1.1
RIPK4P57078 IFIT1P1-201ENST00000400497 1449 ntBASIC8.15□□□□□ -1.1
RIPK4P57078 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
RIPK4P57078 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC8.15□□□□□ -1.1
RIPK4P57078 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
RIPK4P57078 PNKDP1-201ENST00000435914 430 ntBASIC8.15□□□□□ -1.1
RIPK4P57078 AC023141.3-201ENST00000436698 278 ntBASIC8.15□□□□□ -1.1
RIPK4P57078 AL355355.1-201ENST00000442900 793 ntBASIC8.15□□□□□ -1.1
RIPK4P57078 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
RIPK4P57078 PPIAP7-201ENST00000454070 489 ntBASIC8.15□□□□□ -1.1
RIPK4P57078 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC8.15□□□□□ -1.1
RIPK4P57078 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC8.15□□□□□ -1.1
RIPK4P57078 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
RIPK4P57078 RNA5SP434-201ENST00000516647 121 ntBASIC8.15□□□□□ -1.1
RIPK4P57078 AP000620.1-201ENST00000527147 504 ntBASIC8.15□□□□□ -1.1
RIPK4P57078 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
RIPK4P57078 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC8.15□□□□□ -1.1
RIPK4P57078 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC8.15□□□□□ -1.1
RIPK4P57078 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC8.15□□□□□ -1.1
RIPK4P57078 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC8.15□□□□□ -1.1
RIPK4P57078 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC8.15□□□□□ -1.1
RIPK4P57078 NPIPB1P-202ENST00000588786 828 ntBASIC8.15□□□□□ -1.1
RIPK4P57078 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC8.15□□□□□ -1.1
RIPK4P57078 AC073389.3-201ENST00000609434 935 ntBASIC8.15□□□□□ -1.1
RIPK4P57078 RFPL4AP6-201ENST00000616792 846 ntBASIC8.15□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms