Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CIITAP33076 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CIITAP33076 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CIITAP33076 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CIITAP33076 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC7.12□□□□□ -1.27
CIITAP33076 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC7.12□□□□□ -1.27
CIITAP33076 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC7.11□□□□□ -1.27
CIITAP33076 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.27
CIITAP33076 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
CIITAP33076 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC7.11□□□□□ -1.27
CIITAP33076 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC7.11□□□□□ -1.27
CIITAP33076 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
CIITAP33076 CCR2-204ENST00000445132 2386 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
CIITAP33076 OR4G1P-202ENST00000641173 1788 ntBASIC7.11□□□□□ -1.27
CIITAP33076 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
CIITAP33076 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
CIITAP33076 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC7.11□□□□□ -1.27
CIITAP33076 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
CIITAP33076 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
CIITAP33076 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
CIITAP33076 CCL7-202ENST00000394627 696 ntTSL 3 BASIC7.11□□□□□ -1.27
CIITAP33076 ALDH7A1P4-201ENST00000412255 178 ntBASIC7.11□□□□□ -1.27
CIITAP33076 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC7.11□□□□□ -1.27
CIITAP33076 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
CIITAP33076 HIGD1AP16-201ENST00000450986 258 ntBASIC7.11□□□□□ -1.27
CIITAP33076 AC118758.1-202ENST00000454719 225 ntBASIC7.11□□□□□ -1.27
CIITAP33076 RN7SL168P-201ENST00000463821 279 ntBASIC7.11□□□□□ -1.27
CIITAP33076 RPL12P30-201ENST00000488389 499 ntBASIC7.11□□□□□ -1.27
CIITAP33076 MTND6P8-201ENST00000503471 522 ntBASIC7.11□□□□□ -1.27
CIITAP33076 Vault.2-201ENST00000516519 98 ntBASIC7.11□□□□□ -1.27
CIITAP33076 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC7.11□□□□□ -1.27
CIITAP33076 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC7.11□□□□□ -1.27
CIITAP33076 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC7.11□□□□□ -1.27
CIITAP33076 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC7.11□□□□□ -1.27
CIITAP33076 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC7.11□□□□□ -1.27
CIITAP33076 AP005901.4-201ENST00000577336 569 ntBASIC7.11□□□□□ -1.27
CIITAP33076 MIR3154-201ENST00000577829 84 ntBASIC7.11□□□□□ -1.27
CIITAP33076 AC067852.5-201ENST00000589299 310 ntBASIC7.11□□□□□ -1.27
CIITAP33076 DYNLL1P1-201ENST00000595442 269 ntBASIC7.11□□□□□ -1.27
CIITAP33076 AC091193.1-201ENST00000604640 448 ntBASIC7.11□□□□□ -1.27
CIITAP33076 AC006924.1-201ENST00000610750 559 ntBASIC7.11□□□□□ -1.27
CIITAP33076 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC7.11□□□□□ -1.27
CIITAP33076 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
CIITAP33076 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC7.11□□□□□ -1.27
CIITAP33076 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
CIITAP33076 AC105749.1-201ENST00000631338 2008 ntBASIC7.11□□□□□ -1.27
CIITAP33076 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
CIITAP33076 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
CIITAP33076 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC7.11□□□□□ -1.27
CIITAP33076 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC7.11□□□□□ -1.27
CIITAP33076 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
CIITAP33076 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
CIITAP33076 LCOR-201ENST00000286067 4542 ntBASIC7.11□□□□□ -1.27
CIITAP33076 Z93929.1-201ENST00000418200 1475 ntBASIC7.11□□□□□ -1.27
CIITAP33076 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
CIITAP33076 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
CIITAP33076 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
CIITAP33076 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
CIITAP33076 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC7.1□□□□□ -1.27
CIITAP33076 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
CIITAP33076 DMD-202ENST00000343523 5623 ntTSL 5 BASIC7.1□□□□□ -1.27
CIITAP33076 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
CIITAP33076 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
CIITAP33076 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC7.1□□□□□ -1.27
CIITAP33076 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC7.1□□□□□ -1.27
CIITAP33076 AC107977.1-201ENST00000355745 939 ntBASIC7.1□□□□□ -1.27
CIITAP33076 OR11H13P-201ENST00000359695 979 ntBASIC7.1□□□□□ -1.27
CIITAP33076 RNU1-49P-201ENST00000363468 159 ntBASIC7.1□□□□□ -1.27
CIITAP33076 RPL24P2-201ENST00000421023 475 ntBASIC7.1□□□□□ -1.27
CIITAP33076 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC7.1□□□□□ -1.27
CIITAP33076 PPIAP10-201ENST00000438675 458 ntBASIC7.1□□□□□ -1.27
CIITAP33076 RPSAP40-201ENST00000442343 891 ntBASIC7.1□□□□□ -1.27
CIITAP33076 RPL5P7-201ENST00000444235 813 ntBASIC7.1□□□□□ -1.27
CIITAP33076 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC7.1□□□□□ -1.27
CIITAP33076 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
CIITAP33076 VPS25P1-201ENST00000455691 508 ntBASIC7.1□□□□□ -1.27
CIITAP33076 CTSLP6-201ENST00000458273 1002 ntBASIC7.1□□□□□ -1.27
CIITAP33076 RN7SL254P-201ENST00000460609 284 ntBASIC7.1□□□□□ -1.27
CIITAP33076 RPL34P33-201ENST00000486062 334 ntBASIC7.1□□□□□ -1.27
CIITAP33076 AC021006.1-201ENST00000489849 553 ntBASIC7.1□□□□□ -1.27
CIITAP33076 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC7.1□□□□□ -1.27
CIITAP33076 APOBEC3AP1-201ENST00000511396 287 ntBASIC7.1□□□□□ -1.27
CIITAP33076 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC7.1□□□□□ -1.27
CIITAP33076 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC7.1□□□□□ -1.27
CIITAP33076 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC7.1□□□□□ -1.27
CIITAP33076 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC7.1□□□□□ -1.27
CIITAP33076 AC115989.2-201ENST00000578640 563 ntBASIC7.1□□□□□ -1.27
CIITAP33076 MIR3189-201ENST00000578735 73 ntBASIC7.1□□□□□ -1.27
CIITAP33076 AP005136.2-201ENST00000583253 1049 ntBASIC7.1□□□□□ -1.27
CIITAP33076 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC7.1□□□□□ -1.27
CIITAP33076 AC124916.2-201ENST00000604416 224 ntBASIC7.1□□□□□ -1.27
CIITAP33076 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC7.1□□□□□ -1.27
CIITAP33076 AC022726.2-201ENST00000634673 547 ntBASIC7.1□□□□□ -1.27
CIITAP33076 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
CIITAP33076 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
CIITAP33076 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC7.1□□□□□ -1.27
CIITAP33076 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
CIITAP33076 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC7.1□□□□□ -1.27
CIITAP33076 AC011815.2-201ENST00000618230 2021 ntBASIC7.1□□□□□ -1.27
CIITAP33076 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms