Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
TM4SF1P30408 COL21A1-203ENST00000370819 4094 ntAPPRIS ALT1 TSL 1 (best) BASIC7.68□□□□□ -1.18
TM4SF1P30408 DOCK2-211ENST00000520908 4654 ntTSL 2 BASIC7.68□□□□□ -1.18
TM4SF1P30408 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC7.68□□□□□ -1.18
TM4SF1P30408 ATP10B-202ENST00000327245 7566 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
TM4SF1P30408 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
TM4SF1P30408 RNA5SP500-201ENST00000364486 119 ntBASIC7.68□□□□□ -1.18
TM4SF1P30408 AL445238.1-204ENST00000400311 463 ntBASIC7.68□□□□□ -1.18
TM4SF1P30408 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC7.68□□□□□ -1.18
TM4SF1P30408 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC7.68□□□□□ -1.18
TM4SF1P30408 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
TM4SF1P30408 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC7.68□□□□□ -1.18
TM4SF1P30408 SNORA58-201ENST00000505219 137 ntBASIC7.68□□□□□ -1.18
TM4SF1P30408 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC7.68□□□□□ -1.18
TM4SF1P30408 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
TM4SF1P30408 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC7.68□□□□□ -1.18
TM4SF1P30408 AC022182.1-202ENST00000529234 580 ntTSL 2 BASIC7.68□□□□□ -1.18
TM4SF1P30408 AC027026.1-201ENST00000532323 742 ntBASIC7.68□□□□□ -1.18
TM4SF1P30408 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC7.68□□□□□ -1.18
TM4SF1P30408 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC7.68□□□□□ -1.18
TM4SF1P30408 FO393422.1-201ENST00000603908 708 ntBASIC7.68□□□□□ -1.18
TM4SF1P30408 AC016769.4-201ENST00000616893 535 ntBASIC7.68□□□□□ -1.18
TM4SF1P30408 AL035661.1-201ENST00000620459 1144 ntBASIC7.68□□□□□ -1.18
TM4SF1P30408 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC7.68□□□□□ -1.18
TM4SF1P30408 GTF2E1-201ENST00000283875 3012 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
TM4SF1P30408 RSAD2-201ENST00000382040 3519 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
TM4SF1P30408 LINC01128-205ENST00000445118 6606 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
TM4SF1P30408 TCF4-225ENST00000564999 3590 ntAPPRIS P3 TSL 5 BASIC7.68□□□□□ -1.18
TM4SF1P30408 VTI1A-201ENST00000393077 4131 ntAPPRIS P1 TSL 2 BASIC7.68□□□□□ -1.18
TM4SF1P30408 WDCP-202ENST00000406895 3700 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
TM4SF1P30408 AL161901.1-201ENST00000624954 3425 ntBASIC7.68□□□□□ -1.18
TM4SF1P30408 KIAA1217-202ENST00000376451 7383 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
TM4SF1P30408 TTC3P1-201ENST00000399586 6081 ntBASIC7.68□□□□□ -1.18
TM4SF1P30408 OR2T33-202ENST00000641220 4118 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
TM4SF1P30408 AKR1C1-202ENST00000380872 6705 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
TM4SF1P30408 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC7.67□□□□□ -1.18
TM4SF1P30408 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
TM4SF1P30408 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC7.67□□□□□ -1.18
TM4SF1P30408 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC7.67□□□□□ -1.18
TM4SF1P30408 VTA1-202ENST00000367630 7028 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
TM4SF1P30408 NFX1-203ENST00000379540 4604 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
TM4SF1P30408 PBRM1-203ENST00000356770 7523 ntAPPRIS ALT1 TSL 1 (best) BASIC7.67□□□□□ -1.18
TM4SF1P30408 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC7.67□□□□□ -1.18
TM4SF1P30408 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
TM4SF1P30408 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
TM4SF1P30408 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC7.67□□□□□ -1.18
TM4SF1P30408 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
TM4SF1P30408 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
TM4SF1P30408 AL050335.1-201ENST00000396909 869 ntBASIC7.67□□□□□ -1.18
TM4SF1P30408 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC7.67□□□□□ -1.18
TM4SF1P30408 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC7.67□□□□□ -1.18
TM4SF1P30408 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
TM4SF1P30408 DEFA9P-201ENST00000433042 285 ntBASIC7.67□□□□□ -1.18
TM4SF1P30408 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC7.67□□□□□ -1.18
TM4SF1P30408 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC7.67□□□□□ -1.18
TM4SF1P30408 AL512593.1-201ENST00000444758 779 ntBASIC7.67□□□□□ -1.18
TM4SF1P30408 AC073909.1-201ENST00000447112 999 ntBASIC7.67□□□□□ -1.18
TM4SF1P30408 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC7.67□□□□□ -1.18
TM4SF1P30408 SNORA70.20-201ENST00000516848 126 ntBASIC7.67□□□□□ -1.18
TM4SF1P30408 RNA5SP34-201ENST00000516887 130 ntBASIC7.67□□□□□ -1.18
TM4SF1P30408 AC092865.1-201ENST00000544395 1023 ntBASIC7.67□□□□□ -1.18
TM4SF1P30408 DCN-209ENST00000546745 1026 ntTSL 3 BASIC7.67□□□□□ -1.18
TM4SF1P30408 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC7.67□□□□□ -1.18
TM4SF1P30408 AP001496.3-201ENST00000580230 913 ntBASIC7.67□□□□□ -1.18
TM4SF1P30408 AC020916.2-201ENST00000591242 360 ntBASIC7.67□□□□□ -1.18
TM4SF1P30408 AC004948.1-201ENST00000609858 672 ntBASIC7.67□□□□□ -1.18
TM4SF1P30408 MIR6730-201ENST00000622213 67 ntBASIC7.67□□□□□ -1.18
TM4SF1P30408 AC021079.1-201ENST00000625268 907 ntTSL 3 BASIC7.67□□□□□ -1.18
TM4SF1P30408 OR7A1P-202ENST00000641542 1158 ntBASIC7.67□□□□□ -1.18
TM4SF1P30408 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
TM4SF1P30408 OR2A5-202ENST00000641693 8681 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
TM4SF1P30408 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
TM4SF1P30408 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC7.67□□□□□ -1.18
TM4SF1P30408 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
TM4SF1P30408 IL13RA2-202ENST00000371936 1498 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
TM4SF1P30408 MELK-211ENST00000545008 2236 ntTSL 2 BASIC7.67□□□□□ -1.18
TM4SF1P30408 NCAPH-205ENST00000455200 2952 ntAPPRIS ALT2 TSL 5 BASIC7.67□□□□□ -1.18
TM4SF1P30408 IL5RA-207ENST00000438560 2252 ntAPPRIS ALT2 TSL 2 BASIC7.67□□□□□ -1.18
TM4SF1P30408 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC7.67□□□□□ -1.18
TM4SF1P30408 LRP2BP-202ENST00000505916 2302 ntAPPRIS P1 TSL 2 BASIC7.67□□□□□ -1.18
TM4SF1P30408 OR1M1-202ENST00000641627 2535 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
TM4SF1P30408 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC7.66□□□□□ -1.18
TM4SF1P30408 CACNB4-254ENST00000637514 1880 ntTSL 5 BASIC7.66□□□□□ -1.18
TM4SF1P30408 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
TM4SF1P30408 KAT6B-202ENST00000372711 7560 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
TM4SF1P30408 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
TM4SF1P30408 SIPA1L1-201ENST00000358550 6539 ntAPPRIS ALT1 TSL 2 BASIC7.66□□□□□ -1.18
TM4SF1P30408 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
TM4SF1P30408 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
TM4SF1P30408 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
TM4SF1P30408 GGCX-201ENST00000233838 7569 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
TM4SF1P30408 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
TM4SF1P30408 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
TM4SF1P30408 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
TM4SF1P30408 OR11H13P-201ENST00000359695 979 ntBASIC7.66□□□□□ -1.18
TM4SF1P30408 LSM5-203ENST00000409782 649 ntTSL 5 BASIC7.66□□□□□ -1.18
TM4SF1P30408 BMS1P17-202ENST00000416720 316 ntBASIC7.66□□□□□ -1.18
TM4SF1P30408 RPS7P8-201ENST00000418311 581 ntBASIC7.66□□□□□ -1.18
TM4SF1P30408 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC7.66□□□□□ -1.18
TM4SF1P30408 DUTP7-201ENST00000507982 486 ntBASIC7.66□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms