Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 AC024614.1-201ENST00000577546 307 ntBASIC5.39□□□□□ -1.55
HLA-DMAP28067 RN7SL208P-201ENST00000577964 296 ntBASIC5.39□□□□□ -1.55
HLA-DMAP28067 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC5.39□□□□□ -1.55
HLA-DMAP28067 ZNF675-204ENST00000599168 592 ntTSL 2 BASIC5.39□□□□□ -1.55
HLA-DMAP28067 OR51C1P-201ENST00000608504 942 ntBASIC5.39□□□□□ -1.55
HLA-DMAP28067 AC003992.1-201ENST00000635364 557 ntBASIC5.39□□□□□ -1.55
HLA-DMAP28067 KCNJ10-204ENST00000637644 1239 ntTSL 5 BASIC5.39□□□□□ -1.55
HLA-DMAP28067 OR7A1P-202ENST00000641542 1158 ntBASIC5.39□□□□□ -1.55
HLA-DMAP28067 OR7E91P-202ENST00000642062 1198 ntBASIC5.39□□□□□ -1.55
HLA-DMAP28067 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HLA-DMAP28067 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.39□□□□□ -1.55
HLA-DMAP28067 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
HLA-DMAP28067 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
HLA-DMAP28067 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
HLA-DMAP28067 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HLA-DMAP28067 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.39□□□□□ -1.55
HLA-DMAP28067 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC5.39□□□□□ -1.55
HLA-DMAP28067 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HLA-DMAP28067 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
HLA-DMAP28067 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
HLA-DMAP28067 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
HLA-DMAP28067 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
HLA-DMAP28067 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
HLA-DMAP28067 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
HLA-DMAP28067 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
HLA-DMAP28067 HYPM-201ENST00000341016 501 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
HLA-DMAP28067 HMGN2-201ENST00000361427 1191 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
HLA-DMAP28067 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC5.38□□□□□ -1.55
HLA-DMAP28067 HOPX-204ENST00000381260 1141 ntTSL 3 BASIC5.38□□□□□ -1.55
HLA-DMAP28067 RPL5P20-201ENST00000403848 896 ntBASIC5.38□□□□□ -1.55
HLA-DMAP28067 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
HLA-DMAP28067 AC064874.1-201ENST00000409661 441 ntTSL 3 BASIC5.38□□□□□ -1.55
HLA-DMAP28067 AL390195.1-202ENST00000416099 723 ntTSL 2 BASIC5.38□□□□□ -1.55
HLA-DMAP28067 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC5.38□□□□□ -1.55
HLA-DMAP28067 RTCA-AS1-201ENST00000421185 423 ntTSL 3 BASIC5.38□□□□□ -1.55
HLA-DMAP28067 HNRNPA1P57-201ENST00000431359 530 ntTSL 4 BASIC5.38□□□□□ -1.55
HLA-DMAP28067 AL663074.2-201ENST00000440621 479 ntBASIC5.38□□□□□ -1.55
HLA-DMAP28067 RPSAP40-201ENST00000442343 891 ntBASIC5.38□□□□□ -1.55
HLA-DMAP28067 GAPDHP14-201ENST00000450472 937 ntBASIC5.38□□□□□ -1.55
HLA-DMAP28067 RN7SL145P-201ENST00000469955 296 ntBASIC5.38□□□□□ -1.55
HLA-DMAP28067 GLYCTK-AS1-203ENST00000493616 445 ntTSL 3 BASIC5.38□□□□□ -1.55
HLA-DMAP28067 RPL5P14-201ENST00000494197 878 ntBASIC5.38□□□□□ -1.55
HLA-DMAP28067 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.38□□□□□ -1.55
HLA-DMAP28067 AC106800.3-201ENST00000511389 308 ntBASIC5.38□□□□□ -1.55
HLA-DMAP28067 EGFLAM-211ENST00000514476 676 ntTSL 2 BASIC5.38□□□□□ -1.55
HLA-DMAP28067 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC5.38□□□□□ -1.55
HLA-DMAP28067 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC5.38□□□□□ -1.55
HLA-DMAP28067 AC013356.3-201ENST00000558601 584 ntTSL 3 BASIC5.38□□□□□ -1.55
HLA-DMAP28067 AC009120.3-201ENST00000563335 499 ntBASIC5.38□□□□□ -1.55
HLA-DMAP28067 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
HLA-DMAP28067 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC5.38□□□□□ -1.55
HLA-DMAP28067 AL592504.1-201ENST00000605319 439 ntBASIC5.38□□□□□ -1.55
HLA-DMAP28067 AL356056.3-201ENST00000605984 551 ntTSL 3 BASIC5.38□□□□□ -1.55
HLA-DMAP28067 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC5.38□□□□□ -1.55
HLA-DMAP28067 AL008723.3-201ENST00000608926 449 ntBASIC5.38□□□□□ -1.55
HLA-DMAP28067 AC096708.4-201ENST00000620563 552 ntBASIC5.38□□□□□ -1.55
HLA-DMAP28067 AC005618.4-201ENST00000625053 554 ntBASIC5.38□□□□□ -1.55
HLA-DMAP28067 OR5G5P-204ENST00000627642 621 ntBASIC5.38□□□□□ -1.55
HLA-DMAP28067 MIR665-201ENST00000635949 72 ntBASIC5.38□□□□□ -1.55
HLA-DMAP28067 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
HLA-DMAP28067 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
HLA-DMAP28067 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.38□□□□□ -1.55
HLA-DMAP28067 PSMC1P6-201ENST00000477233 1319 ntBASIC5.38□□□□□ -1.55
HLA-DMAP28067 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
HLA-DMAP28067 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
HLA-DMAP28067 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
HLA-DMAP28067 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
HLA-DMAP28067 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
HLA-DMAP28067 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.37□□□□□ -1.55
HLA-DMAP28067 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HLA-DMAP28067 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.37□□□□□ -1.55
HLA-DMAP28067 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.37□□□□□ -1.55
HLA-DMAP28067 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
HLA-DMAP28067 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.37□□□□□ -1.55
HLA-DMAP28067 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
HLA-DMAP28067 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.37□□□□□ -1.55
HLA-DMAP28067 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
HLA-DMAP28067 WFDC10B-202ENST00000335769 475 ntAPPRIS P4 TSL 1 (best) BASIC5.37□□□□□ -1.55
HLA-DMAP28067 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
HLA-DMAP28067 PKIB-203ENST00000368446 556 ntTSL 2 BASIC5.37□□□□□ -1.55
HLA-DMAP28067 OR2H1-204ENST00000396792 1294 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
HLA-DMAP28067 VIM2P-201ENST00000402383 1294 ntBASIC5.37□□□□□ -1.55
HLA-DMAP28067 AC079809.1-201ENST00000415468 276 ntBASIC5.37□□□□□ -1.55
HLA-DMAP28067 METTL15P3-201ENST00000415522 1221 ntBASIC5.37□□□□□ -1.55
HLA-DMAP28067 REREP1Y-201ENST00000422655 198 ntBASIC5.37□□□□□ -1.55
HLA-DMAP28067 REREP2Y-201ENST00000439103 200 ntBASIC5.37□□□□□ -1.55
HLA-DMAP28067 AC027124.1-201ENST00000440852 466 ntBASIC5.37□□□□□ -1.55
HLA-DMAP28067 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC5.37□□□□□ -1.55
HLA-DMAP28067 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC5.37□□□□□ -1.55
HLA-DMAP28067 AC022400.2-201ENST00000446730 866 ntTSL 2 BASIC5.37□□□□□ -1.55
HLA-DMAP28067 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC5.37□□□□□ -1.55
HLA-DMAP28067 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC5.37□□□□□ -1.55
HLA-DMAP28067 RPL10P7-201ENST00000495649 625 ntBASIC5.37□□□□□ -1.55
HLA-DMAP28067 AC068721.1-201ENST00000507156 583 ntTSL 5 BASIC5.37□□□□□ -1.55
HLA-DMAP28067 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC5.37□□□□□ -1.55
HLA-DMAP28067 AC090958.1-201ENST00000511122 351 ntBASIC5.37□□□□□ -1.55
HLA-DMAP28067 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC5.37□□□□□ -1.55
HLA-DMAP28067 RNA5SP318-201ENST00000516352 92 ntBASIC5.37□□□□□ -1.55
HLA-DMAP28067 RNA5SP400-201ENST00000517155 111 ntBASIC5.37□□□□□ -1.55
HLA-DMAP28067 AC024145.1-201ENST00000535324 775 ntTSL 3 BASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 272.3 ms