Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 AC007159.1-201ENST00000566529 4706 ntBASIC5.33□□□□□ -1.56
CCL1P22362 AC011416.1-201ENST00000514947 1732 ntBASIC5.33□□□□□ -1.56
CCL1P22362 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.33□□□□□ -1.56
CCL1P22362 ABCA11P-202ENST00000504019 2110 ntBASIC5.33□□□□□ -1.56
CCL1P22362 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC5.33□□□□□ -1.56
CCL1P22362 AL133243.2-201ENST00000610331 1621 ntBASIC5.33□□□□□ -1.56
CCL1P22362 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC5.33□□□□□ -1.56
CCL1P22362 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
CCL1P22362 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CCL1P22362 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
CCL1P22362 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CCL1P22362 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
CCL1P22362 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC5.33□□□□□ -1.56
CCL1P22362 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CCL1P22362 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
CCL1P22362 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CCL1P22362 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC5.32□□□□□ -1.56
CCL1P22362 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CCL1P22362 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CCL1P22362 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CCL1P22362 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CCL1P22362 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC5.32□□□□□ -1.56
CCL1P22362 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC5.32□□□□□ -1.56
CCL1P22362 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CCL1P22362 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
CCL1P22362 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CCL1P22362 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC5.32□□□□□ -1.56
CCL1P22362 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
CCL1P22362 AL157702.1-201ENST00000398764 426 ntBASIC5.32□□□□□ -1.56
CCL1P22362 AC003045.1-201ENST00000398779 713 ntBASIC5.32□□□□□ -1.56
CCL1P22362 RNA5SP231-201ENST00000410496 138 ntBASIC5.32□□□□□ -1.56
CCL1P22362 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.32□□□□□ -1.56
CCL1P22362 WDR82P2-201ENST00000444540 928 ntBASIC5.32□□□□□ -1.56
CCL1P22362 AL162739.1-201ENST00000450606 307 ntBASIC5.32□□□□□ -1.56
CCL1P22362 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC5.32□□□□□ -1.56
CCL1P22362 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC5.32□□□□□ -1.56
CCL1P22362 RN7SL352P-201ENST00000466002 277 ntBASIC5.32□□□□□ -1.56
CCL1P22362 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC5.32□□□□□ -1.56
CCL1P22362 RN7SL104P-201ENST00000498686 293 ntBASIC5.32□□□□□ -1.56
CCL1P22362 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC5.32□□□□□ -1.56
CCL1P22362 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC5.32□□□□□ -1.56
CCL1P22362 NATP-201ENST00000523491 878 ntBASIC5.32□□□□□ -1.56
CCL1P22362 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC5.32□□□□□ -1.56
CCL1P22362 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC5.32□□□□□ -1.56
CCL1P22362 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC5.32□□□□□ -1.56
CCL1P22362 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CCL1P22362 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC5.32□□□□□ -1.56
CCL1P22362 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC5.32□□□□□ -1.56
CCL1P22362 AL591222.2-201ENST00000604443 754 ntBASIC5.32□□□□□ -1.56
CCL1P22362 AC141002.1-201ENST00000607025 279 ntBASIC5.32□□□□□ -1.56
CCL1P22362 AL589182.1-201ENST00000611785 320 ntTSL 5 BASIC5.32□□□□□ -1.56
CCL1P22362 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.32□□□□□ -1.56
CCL1P22362 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC5.32□□□□□ -1.56
CCL1P22362 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
CCL1P22362 CASC19-246ENST00000641625 1606 ntBASIC5.32□□□□□ -1.56
CCL1P22362 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC5.32□□□□□ -1.56
CCL1P22362 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CCL1P22362 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC5.32□□□□□ -1.56
CCL1P22362 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC5.32□□□□□ -1.56
CCL1P22362 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CCL1P22362 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.32□□□□□ -1.56
CCL1P22362 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC5.32□□□□□ -1.56
CCL1P22362 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CCL1P22362 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CCL1P22362 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CCL1P22362 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC5.32□□□□□ -1.56
CCL1P22362 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC5.32□□□□□ -1.56
CCL1P22362 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CCL1P22362 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
CCL1P22362 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC5.32□□□□□ -1.56
CCL1P22362 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CCL1P22362 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
CCL1P22362 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CCL1P22362 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CCL1P22362 AC092724.1-201ENST00000624623 3397 ntBASIC5.31□□□□□ -1.56
CCL1P22362 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CCL1P22362 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CCL1P22362 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CCL1P22362 FUNDC2P3-201ENST00000334716 533 ntBASIC5.31□□□□□ -1.56
CCL1P22362 SNORA77.2-201ENST00000408571 112 ntBASIC5.31□□□□□ -1.56
CCL1P22362 RN7SKP166-201ENST00000410812 305 ntBASIC5.31□□□□□ -1.56
CCL1P22362 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC5.31□□□□□ -1.56
CCL1P22362 OSTCP4-201ENST00000424397 449 ntBASIC5.31□□□□□ -1.56
CCL1P22362 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CCL1P22362 AC021876.1-201ENST00000425959 359 ntBASIC5.31□□□□□ -1.56
CCL1P22362 AC092651.1-201ENST00000426110 312 ntBASIC5.31□□□□□ -1.56
CCL1P22362 RPL12P16-201ENST00000431098 498 ntBASIC5.31□□□□□ -1.56
CCL1P22362 AC094019.1-201ENST00000434678 472 ntBASIC5.31□□□□□ -1.56
CCL1P22362 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC5.31□□□□□ -1.56
CCL1P22362 HIGD1AP16-201ENST00000450986 258 ntBASIC5.31□□□□□ -1.56
CCL1P22362 AL133351.3-201ENST00000454998 193 ntBASIC5.31□□□□□ -1.56
CCL1P22362 AC044784.1-201ENST00000456526 677 ntTSL 3 BASIC5.31□□□□□ -1.56
CCL1P22362 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC5.31□□□□□ -1.56
CCL1P22362 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.31□□□□□ -1.56
CCL1P22362 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC5.31□□□□□ -1.56
CCL1P22362 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC5.31□□□□□ -1.56
CCL1P22362 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC5.31□□□□□ -1.56
CCL1P22362 RNA5SP206-201ENST00000516703 121 ntBASIC5.31□□□□□ -1.56
CCL1P22362 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC5.31□□□□□ -1.56
CCL1P22362 TPM3P3-201ENST00000521343 354 ntBASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms