Protein–RNA interactions for Protein: P18847

ATF3, Cyclic AMP-dependent transcription factor ATF-3, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3P18847 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC8.66□□□□□ -1.02
ATF3P18847 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC8.66□□□□□ -1.02
ATF3P18847 BPTF-203ENST00000335221 2627 ntTSL 5 BASIC8.66□□□□□ -1.02
ATF3P18847 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
ATF3P18847 AC005839.1-201ENST00000624148 3213 ntBASIC8.65□□□□□ -1.02
ATF3P18847 MELK-207ENST00000536860 2342 ntTSL 2 BASIC8.65□□□□□ -1.02
ATF3P18847 DTNA-226ENST00000596745 1508 ntTSL 2 BASIC8.65□□□□□ -1.02
ATF3P18847 AC022325.1-201ENST00000502748 2199 ntBASIC8.65□□□□□ -1.02
ATF3P18847 AGXT2-206ENST00000618015 2181 ntTSL 5 BASIC8.65□□□□□ -1.02
ATF3P18847 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC8.65□□□□□ -1.02
ATF3P18847 TLR10-204ENST00000506111 3462 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
ATF3P18847 FAM227A-205ENST00000535113 10322 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.02
ATF3P18847 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC8.65□□□□□ -1.02
ATF3P18847 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC8.65□□□□□ -1.02
ATF3P18847 RNA5SP514-201ENST00000363717 111 ntBASIC8.65□□□□□ -1.02
ATF3P18847 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC8.65□□□□□ -1.02
ATF3P18847 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC8.65□□□□□ -1.02
ATF3P18847 RN7SKP216-201ENST00000411050 312 ntBASIC8.65□□□□□ -1.02
ATF3P18847 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC8.65□□□□□ -1.02
ATF3P18847 NFYAP1-201ENST00000431953 972 ntBASIC8.65□□□□□ -1.02
ATF3P18847 AC009237.1-201ENST00000442127 744 ntBASIC8.65□□□□□ -1.02
ATF3P18847 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC8.65□□□□□ -1.02
ATF3P18847 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC8.65□□□□□ -1.02
ATF3P18847 AC231760.1-201ENST00000498002 260 ntBASIC8.65□□□□□ -1.02
ATF3P18847 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC8.65□□□□□ -1.02
ATF3P18847 PTTG3P-201ENST00000521862 606 ntBASIC8.65□□□□□ -1.02
ATF3P18847 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC8.65□□□□□ -1.02
ATF3P18847 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC8.65□□□□□ -1.02
ATF3P18847 BICD1-206ENST00000551086 423 ntTSL 3 BASIC8.65□□□□□ -1.02
ATF3P18847 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC8.65□□□□□ -1.02
ATF3P18847 AP001496.3-201ENST00000580230 913 ntBASIC8.65□□□□□ -1.02
ATF3P18847 FO393422.1-201ENST00000603908 708 ntBASIC8.65□□□□□ -1.02
ATF3P18847 AC079395.2-201ENST00000610982 737 ntBASIC8.65□□□□□ -1.02
ATF3P18847 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC8.65□□□□□ -1.02
ATF3P18847 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
ATF3P18847 MITF-201ENST00000314557 1798 ntAPPRIS ALT1 TSL 1 (best) BASIC8.65□□□□□ -1.02
ATF3P18847 SORBS1-204ENST00000361941 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.03
ATF3P18847 PRRG1-201ENST00000378628 4493 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
ATF3P18847 ADAM3A-207ENST00000490268 2627 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
ATF3P18847 XRCC6P4-201ENST00000518193 2067 ntBASIC8.65□□□□□ -1.03
ATF3P18847 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC8.65□□□□□ -1.03
ATF3P18847 VTA1-202ENST00000367630 7028 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
ATF3P18847 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC8.64□□□□□ -1.03
ATF3P18847 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
ATF3P18847 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC8.64□□□□□ -1.03
ATF3P18847 MID1-212ENST00000616003 1926 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
ATF3P18847 ST8SIA5-203ENST00000538168 13761 ntTSL 2 BASIC8.64□□□□□ -1.03
ATF3P18847 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
ATF3P18847 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC8.64□□□□□ -1.03
ATF3P18847 MAPK10-298ENST00000641297 3040 ntAPPRIS P2 BASIC8.64□□□□□ -1.03
ATF3P18847 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC8.64□□□□□ -1.03
ATF3P18847 SNORA70-201ENST00000384436 135 ntBASIC8.64□□□□□ -1.03
ATF3P18847 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
ATF3P18847 OR7E101P-201ENST00000400428 513 ntBASIC8.64□□□□□ -1.03
ATF3P18847 AC096537.2-201ENST00000413707 714 ntBASIC8.64□□□□□ -1.03
ATF3P18847 NPM1P4-201ENST00000414095 812 ntBASIC8.64□□□□□ -1.03
ATF3P18847 NIPA2P1-201ENST00000426223 976 ntBASIC8.64□□□□□ -1.03
ATF3P18847 PTMAP6-201ENST00000439110 327 ntBASIC8.64□□□□□ -1.03
ATF3P18847 AL157385.1-201ENST00000446973 268 ntBASIC8.64□□□□□ -1.03
ATF3P18847 MORF4-201ENST00000447135 971 ntBASIC8.64□□□□□ -1.03
ATF3P18847 AL050331.2-201ENST00000457319 421 ntTSL 3 BASIC8.64□□□□□ -1.03
ATF3P18847 DUTP7-201ENST00000507982 486 ntBASIC8.64□□□□□ -1.03
ATF3P18847 AC010343.2-201ENST00000510162 224 ntBASIC8.64□□□□□ -1.03
ATF3P18847 AC106800.3-201ENST00000511389 308 ntBASIC8.64□□□□□ -1.03
ATF3P18847 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC8.64□□□□□ -1.03
ATF3P18847 MIR4776-2-201ENST00000580204 80 ntBASIC8.64□□□□□ -1.03
ATF3P18847 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC8.64□□□□□ -1.03
ATF3P18847 AC016590.3-201ENST00000611171 753 ntBASIC8.64□□□□□ -1.03
ATF3P18847 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC8.64□□□□□ -1.03
ATF3P18847 LCP1-202ENST00000398576 3944 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
ATF3P18847 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
ATF3P18847 QTRT2-212ENST00000485050 3844 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
ATF3P18847 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
ATF3P18847 TEKT1-201ENST00000338694 3421 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
ATF3P18847 SEPT14-201ENST00000388975 3785 ntAPPRIS P1 TSL 2 BASIC8.64□□□□□ -1.03
ATF3P18847 RSRC1-203ENST00000464171 2411 ntTSL 5 BASIC8.63□□□□□ -1.03
ATF3P18847 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
ATF3P18847 AC027279.4-201ENST00000624371 2072 ntBASIC8.63□□□□□ -1.03
ATF3P18847 NR3C1-205ENST00000415690 3789 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
ATF3P18847 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC8.63□□□□□ -1.03
ATF3P18847 TSC1-203ENST00000440111 8463 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
ATF3P18847 UNC80-201ENST00000272845 13440 ntTSL 5 BASIC8.63□□□□□ -1.03
ATF3P18847 OR8H1-203ENST00000641600 2927 ntAPPRIS P2 BASIC8.63□□□□□ -1.03
ATF3P18847 RIF1-201ENST00000243326 15003 ntAPPRIS P3 TSL 1 (best) BASIC8.63□□□□□ -1.03
ATF3P18847 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
ATF3P18847 Y_RNA.625-201ENST00000411256 107 ntBASIC8.63□□□□□ -1.03
ATF3P18847 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC8.63□□□□□ -1.03
ATF3P18847 AC002504.1-201ENST00000438281 691 ntBASIC8.63□□□□□ -1.03
ATF3P18847 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC8.63□□□□□ -1.03
ATF3P18847 SNORA70.20-201ENST00000516848 126 ntBASIC8.63□□□□□ -1.03
ATF3P18847 INTS9-AS1-201ENST00000520055 548 ntTSL 5 BASIC8.63□□□□□ -1.03
ATF3P18847 PCNAP4-201ENST00000532690 730 ntBASIC8.63□□□□□ -1.03
ATF3P18847 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC8.63□□□□□ -1.03
ATF3P18847 AC084033.1-201ENST00000550830 633 ntBASIC8.63□□□□□ -1.03
ATF3P18847 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC8.63□□□□□ -1.03
ATF3P18847 MIR1269B-201ENST00000580405 75 ntBASIC8.63□□□□□ -1.03
ATF3P18847 AC015923.1-202ENST00000581421 491 ntTSL 2 BASIC8.63□□□□□ -1.03
ATF3P18847 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC8.63□□□□□ -1.03
ATF3P18847 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC8.63□□□□□ -1.03
ATF3P18847 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC8.63□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms