Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC5.45□□□□□ -1.54
ATF1P18846 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC5.45□□□□□ -1.54
ATF1P18846 RPL3P13-201ENST00000550415 216 ntBASIC5.45□□□□□ -1.54
ATF1P18846 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC5.45□□□□□ -1.54
ATF1P18846 AC023310.2-201ENST00000553844 547 ntBASIC5.45□□□□□ -1.54
ATF1P18846 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC5.45□□□□□ -1.54
ATF1P18846 TPRX1P1-201ENST00000557620 319 ntBASIC5.45□□□□□ -1.54
ATF1P18846 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC5.45□□□□□ -1.54
ATF1P18846 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC5.45□□□□□ -1.54
ATF1P18846 AP001357.1-201ENST00000586304 1053 ntBASIC5.45□□□□□ -1.54
ATF1P18846 ZNF431-203ENST00000594425 610 ntTSL 2 BASIC5.45□□□□□ -1.54
ATF1P18846 RPL7AP69-201ENST00000595306 806 ntBASIC5.45□□□□□ -1.54
ATF1P18846 ZNF677-211ENST00000601828 719 ntTSL 2 BASIC5.45□□□□□ -1.54
ATF1P18846 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC5.45□□□□□ -1.54
ATF1P18846 CLK4-214ENST00000611575 1206 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
ATF1P18846 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
ATF1P18846 Xist_exon4.1-201ENST00000615964 126 ntBASIC5.45□□□□□ -1.54
ATF1P18846 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
ATF1P18846 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.45□□□□□ -1.54
ATF1P18846 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.45□□□□□ -1.54
ATF1P18846 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
ATF1P18846 AC004023.1-201ENST00000561473 1744 ntBASIC5.45□□□□□ -1.54
ATF1P18846 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC5.45□□□□□ -1.54
ATF1P18846 AP001157.1-201ENST00000550837 2339 ntBASIC5.45□□□□□ -1.54
ATF1P18846 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.44□□□□□ -1.54
ATF1P18846 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC5.44□□□□□ -1.54
ATF1P18846 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
ATF1P18846 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
ATF1P18846 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
ATF1P18846 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.44□□□□□ -1.54
ATF1P18846 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
ATF1P18846 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC5.44□□□□□ -1.54
ATF1P18846 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
ATF1P18846 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
ATF1P18846 RNA5SP308-201ENST00000362532 115 ntBASIC5.44□□□□□ -1.54
ATF1P18846 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
ATF1P18846 MIR138-2-201ENST00000384916 84 ntBASIC5.44□□□□□ -1.54
ATF1P18846 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.44□□□□□ -1.54
ATF1P18846 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
ATF1P18846 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC5.44□□□□□ -1.54
ATF1P18846 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC5.44□□□□□ -1.54
ATF1P18846 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC5.44□□□□□ -1.54
ATF1P18846 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC5.44□□□□□ -1.54
ATF1P18846 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC5.44□□□□□ -1.54
ATF1P18846 AC083862.1-201ENST00000427378 1242 ntBASIC5.44□□□□□ -1.54
ATF1P18846 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
ATF1P18846 AL731534.1-201ENST00000434711 269 ntBASIC5.44□□□□□ -1.54
ATF1P18846 BMS1P11-201ENST00000442351 885 ntBASIC5.44□□□□□ -1.54
ATF1P18846 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC5.44□□□□□ -1.54
ATF1P18846 EIF3LP2-201ENST00000457262 807 ntBASIC5.44□□□□□ -1.54
ATF1P18846 BMS1P9-201ENST00000457640 885 ntBASIC5.44□□□□□ -1.54
ATF1P18846 AC093815.1-201ENST00000508637 280 ntBASIC5.44□□□□□ -1.54
ATF1P18846 AC010343.2-201ENST00000510162 224 ntBASIC5.44□□□□□ -1.54
ATF1P18846 RNA5SP75-201ENST00000516841 111 ntBASIC5.44□□□□□ -1.54
ATF1P18846 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC5.44□□□□□ -1.54
ATF1P18846 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC5.44□□□□□ -1.54
ATF1P18846 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC5.44□□□□□ -1.54
ATF1P18846 AC133552.4-201ENST00000576103 676 ntBASIC5.44□□□□□ -1.54
ATF1P18846 AC016383.1-201ENST00000582700 714 ntTSL 3 BASIC5.44□□□□□ -1.54
ATF1P18846 SYPL1P2-201ENST00000582878 727 ntBASIC5.44□□□□□ -1.54
ATF1P18846 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC5.44□□□□□ -1.54
ATF1P18846 MIR132-201ENST00000591554 101 ntBASIC5.44□□□□□ -1.54
ATF1P18846 AC099777.1-201ENST00000603779 1070 ntBASIC5.44□□□□□ -1.54
ATF1P18846 AC073046.2-201ENST00000604756 527 ntBASIC5.44□□□□□ -1.54
ATF1P18846 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC5.44□□□□□ -1.54
ATF1P18846 AC006924.1-201ENST00000610750 559 ntBASIC5.44□□□□□ -1.54
ATF1P18846 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC5.44□□□□□ -1.54
ATF1P18846 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC5.44□□□□□ -1.54
ATF1P18846 AC006387.1-201ENST00000626365 671 ntTSL 5 BASIC5.44□□□□□ -1.54
ATF1P18846 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC5.44□□□□□ -1.54
ATF1P18846 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
ATF1P18846 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
ATF1P18846 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
ATF1P18846 AP002512.4-202ENST00000641599 4530 ntBASIC5.44□□□□□ -1.54
ATF1P18846 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC5.44□□□□□ -1.54
ATF1P18846 AL591135.1-201ENST00000401578 5914 ntBASIC5.44□□□□□ -1.54
ATF1P18846 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
ATF1P18846 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
ATF1P18846 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC5.44□□□□□ -1.54
ATF1P18846 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC5.44□□□□□ -1.54
ATF1P18846 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.44□□□□□ -1.54
ATF1P18846 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
ATF1P18846 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
ATF1P18846 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
ATF1P18846 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
ATF1P18846 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.43□□□□□ -1.54
ATF1P18846 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC5.43□□□□□ -1.54
ATF1P18846 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.43□□□□□ -1.54
ATF1P18846 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC5.43□□□□□ -1.54
ATF1P18846 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
ATF1P18846 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC5.43□□□□□ -1.54
ATF1P18846 DNM1P47-203ENST00000571780 12667 ntBASIC5.43□□□□□ -1.54
ATF1P18846 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
ATF1P18846 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
ATF1P18846 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.43□□□□□ -1.54
ATF1P18846 AC010894.1-201ENST00000313760 361 ntBASIC5.43□□□□□ -1.54
ATF1P18846 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
ATF1P18846 RNU1-5P-201ENST00000362684 144 ntBASIC5.43□□□□□ -1.54
ATF1P18846 SNORD1C-201ENST00000363315 78 ntBASIC5.43□□□□□ -1.54
ATF1P18846 AL445238.1-204ENST00000400311 463 ntBASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms