Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
CTLA4P16410 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CTLA4P16410 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
CTLA4P16410 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CTLA4P16410 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC5.49□□□□□ -1.53
CTLA4P16410 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC5.49□□□□□ -1.53
CTLA4P16410 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CTLA4P16410 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC5.49□□□□□ -1.53
CTLA4P16410 AL359091.1-201ENST00000449048 1734 ntBASIC5.49□□□□□ -1.53
CTLA4P16410 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC5.49□□□□□ -1.53
CTLA4P16410 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
CTLA4P16410 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC5.49□□□□□ -1.53
CTLA4P16410 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC5.49□□□□□ -1.53
CTLA4P16410 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC5.49□□□□□ -1.53
CTLA4P16410 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
CTLA4P16410 MTND2P12-201ENST00000417560 1252 ntBASIC5.49□□□□□ -1.53
CTLA4P16410 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC5.49□□□□□ -1.53
CTLA4P16410 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC5.49□□□□□ -1.53
CTLA4P16410 PPIAP10-201ENST00000438675 458 ntBASIC5.49□□□□□ -1.53
CTLA4P16410 UBQLN1P1-207ENST00000441056 1169 ntBASIC5.49□□□□□ -1.53
CTLA4P16410 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CTLA4P16410 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC5.49□□□□□ -1.53
CTLA4P16410 RBMY2HP-201ENST00000457961 720 ntBASIC5.49□□□□□ -1.53
CTLA4P16410 AL445687.2-201ENST00000458156 728 ntBASIC5.49□□□□□ -1.53
CTLA4P16410 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC5.49□□□□□ -1.53
CTLA4P16410 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC5.49□□□□□ -1.53
CTLA4P16410 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC5.49□□□□□ -1.53
CTLA4P16410 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC5.49□□□□□ -1.53
CTLA4P16410 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC5.49□□□□□ -1.53
CTLA4P16410 AC113191.1-201ENST00000517759 403 ntBASIC5.49□□□□□ -1.53
CTLA4P16410 TEK-204ENST00000519097 3836 ntTSL 2 BASIC5.49□□□□□ -1.53
CTLA4P16410 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC5.49□□□□□ -1.53
CTLA4P16410 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC5.49□□□□□ -1.53
CTLA4P16410 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC5.49□□□□□ -1.53
CTLA4P16410 MRPS21P9-201ENST00000571150 257 ntBASIC5.49□□□□□ -1.53
CTLA4P16410 MIR3157-201ENST00000578688 85 ntBASIC5.49□□□□□ -1.53
CTLA4P16410 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC5.49□□□□□ -1.53
CTLA4P16410 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC5.49□□□□□ -1.53
CTLA4P16410 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC5.49□□□□□ -1.53
CTLA4P16410 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC5.49□□□□□ -1.53
CTLA4P16410 AC022106.1-201ENST00000612834 766 ntBASIC5.49□□□□□ -1.53
CTLA4P16410 MIR6811-201ENST00000620409 58 ntBASIC5.49□□□□□ -1.53
CTLA4P16410 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC5.49□□□□□ -1.53
CTLA4P16410 AC087269.2-201ENST00000641764 975 ntBASIC5.49□□□□□ -1.53
CTLA4P16410 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CTLA4P16410 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC5.49□□□□□ -1.53
CTLA4P16410 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CTLA4P16410 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC5.49□□□□□ -1.53
CTLA4P16410 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
CTLA4P16410 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.49□□□□□ -1.53
CTLA4P16410 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
CTLA4P16410 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CTLA4P16410 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.48□□□□□ -1.53
CTLA4P16410 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC5.48□□□□□ -1.53
CTLA4P16410 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC5.48□□□□□ -1.53
CTLA4P16410 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
CTLA4P16410 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC5.48□□□□□ -1.53
CTLA4P16410 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
CTLA4P16410 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CTLA4P16410 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
CTLA4P16410 AC024587.1-201ENST00000505925 2157 ntBASIC5.48□□□□□ -1.53
CTLA4P16410 AC023632.6-201ENST00000624338 2177 ntBASIC5.48□□□□□ -1.53
CTLA4P16410 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
CTLA4P16410 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CTLA4P16410 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC5.48□□□□□ -1.53
CTLA4P16410 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC5.48□□□□□ -1.53
CTLA4P16410 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CTLA4P16410 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CTLA4P16410 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
CTLA4P16410 AL121835.1-201ENST00000404250 354 ntBASIC5.48□□□□□ -1.53
CTLA4P16410 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CTLA4P16410 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC5.48□□□□□ -1.53
CTLA4P16410 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC5.48□□□□□ -1.53
CTLA4P16410 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CTLA4P16410 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC5.48□□□□□ -1.53
CTLA4P16410 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC5.48□□□□□ -1.53
CTLA4P16410 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CTLA4P16410 AC094019.1-201ENST00000434678 472 ntBASIC5.48□□□□□ -1.53
CTLA4P16410 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC5.48□□□□□ -1.53
CTLA4P16410 H3F3BP1-201ENST00000440551 403 ntBASIC5.48□□□□□ -1.53
CTLA4P16410 POU5F1P5-201ENST00000445059 658 ntBASIC5.48□□□□□ -1.53
CTLA4P16410 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC5.48□□□□□ -1.53
CTLA4P16410 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC5.48□□□□□ -1.53
CTLA4P16410 SETP4-201ENST00000455717 868 ntBASIC5.48□□□□□ -1.53
CTLA4P16410 AL356157.1-201ENST00000456722 732 ntTSL 3 BASIC5.48□□□□□ -1.53
CTLA4P16410 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC5.48□□□□□ -1.53
CTLA4P16410 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC5.48□□□□□ -1.53
CTLA4P16410 RN7SL104P-201ENST00000498686 293 ntBASIC5.48□□□□□ -1.53
CTLA4P16410 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC5.48□□□□□ -1.53
CTLA4P16410 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC5.48□□□□□ -1.53
CTLA4P16410 Y_RNA.710-201ENST00000516975 110 ntBASIC5.48□□□□□ -1.53
CTLA4P16410 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC5.48□□□□□ -1.53
CTLA4P16410 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC5.48□□□□□ -1.53
CTLA4P16410 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC5.48□□□□□ -1.53
CTLA4P16410 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC5.48□□□□□ -1.53
CTLA4P16410 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC5.48□□□□□ -1.53
CTLA4P16410 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC5.48□□□□□ -1.53
CTLA4P16410 RN7SL66P-201ENST00000582099 264 ntBASIC5.48□□□□□ -1.53
CTLA4P16410 PRELID3BP3-201ENST00000584963 545 ntBASIC5.48□□□□□ -1.53
CTLA4P16410 GLYATL1P2-202ENST00000588046 902 ntBASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms