Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 RN7SL655P-201ENST00000486087 298 ntBASIC6.3□□□□□ -1.4
PCNAP12004 AC022206.1-201ENST00000495947 347 ntBASIC6.3□□□□□ -1.4
PCNAP12004 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC6.3□□□□□ -1.4
PCNAP12004 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC6.3□□□□□ -1.4
PCNAP12004 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC6.3□□□□□ -1.4
PCNAP12004 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
PCNAP12004 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC6.3□□□□□ -1.4
PCNAP12004 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC6.3□□□□□ -1.4
PCNAP12004 HNRNPA1P74-201ENST00000560782 835 ntBASIC6.3□□□□□ -1.4
PCNAP12004 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC6.3□□□□□ -1.4
PCNAP12004 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC6.3□□□□□ -1.4
PCNAP12004 AC126323.5-201ENST00000569913 592 ntTSL 3 BASIC6.3□□□□□ -1.4
PCNAP12004 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC6.3□□□□□ -1.4
PCNAP12004 RN7SL208P-201ENST00000577964 296 ntBASIC6.3□□□□□ -1.4
PCNAP12004 AC245128.3-201ENST00000594721 748 ntBASIC6.3□□□□□ -1.4
PCNAP12004 AL162574.2-201ENST00000614618 657 ntBASIC6.3□□□□□ -1.4
PCNAP12004 AL031658.2-201ENST00000616850 651 ntBASIC6.3□□□□□ -1.4
PCNAP12004 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC6.3□□□□□ -1.4
PCNAP12004 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
PCNAP12004 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
PCNAP12004 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
PCNAP12004 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
PCNAP12004 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
PCNAP12004 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
PCNAP12004 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
PCNAP12004 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC6.29□□□□□ -1.4
PCNAP12004 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
PCNAP12004 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC6.29□□□□□ -1.4
PCNAP12004 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC6.29□□□□□ -1.4
PCNAP12004 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC6.29□□□□□ -1.4
PCNAP12004 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
PCNAP12004 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
PCNAP12004 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
PCNAP12004 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC6.29□□□□□ -1.4
PCNAP12004 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
PCNAP12004 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
PCNAP12004 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
PCNAP12004 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
PCNAP12004 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC6.29□□□□□ -1.4
PCNAP12004 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC6.29□□□□□ -1.4
PCNAP12004 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
PCNAP12004 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
PCNAP12004 AL589826.1-201ENST00000340697 249 ntBASIC6.29□□□□□ -1.4
PCNAP12004 STAG3L4-201ENST00000352103 530 ntBASIC6.29□□□□□ -1.4
PCNAP12004 RNA5SP140-201ENST00000364524 92 ntBASIC6.29□□□□□ -1.4
PCNAP12004 SNORA7A-201ENST00000384765 139 ntBASIC6.29□□□□□ -1.4
PCNAP12004 FDPSP5-201ENST00000399474 1057 ntBASIC6.29□□□□□ -1.4
PCNAP12004 ZNF37CP-201ENST00000406795 241 ntBASIC6.29□□□□□ -1.4
PCNAP12004 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
PCNAP12004 OR5W1P-201ENST00000423705 938 ntBASIC6.29□□□□□ -1.4
PCNAP12004 AC012497.1-201ENST00000429392 575 ntBASIC6.29□□□□□ -1.4
PCNAP12004 CREM-217ENST00000439705 2306 ntTSL 5 BASIC6.29□□□□□ -1.4
PCNAP12004 H3F3BP1-201ENST00000440551 403 ntBASIC6.29□□□□□ -1.4
PCNAP12004 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC6.29□□□□□ -1.4
PCNAP12004 MTND2P3-201ENST00000452458 470 ntBASIC6.29□□□□□ -1.4
PCNAP12004 TFP1-201ENST00000460564 572 ntTSL 4 BASIC6.29□□□□□ -1.4
PCNAP12004 RPS3AP49-201ENST00000472161 790 ntBASIC6.29□□□□□ -1.4
PCNAP12004 TFP1-203ENST00000490470 561 ntTSL 4 BASIC6.29□□□□□ -1.4
PCNAP12004 RPL19P11-201ENST00000495944 589 ntBASIC6.29□□□□□ -1.4
PCNAP12004 AC009567.2-201ENST00000502989 349 ntBASIC6.29□□□□□ -1.4
PCNAP12004 AC010834.1-201ENST00000517998 696 ntTSL 2 BASIC6.29□□□□□ -1.4
PCNAP12004 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
PCNAP12004 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC6.29□□□□□ -1.4
PCNAP12004 OR4A6P-201ENST00000534364 970 ntBASIC6.29□□□□□ -1.4
PCNAP12004 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC6.29□□□□□ -1.4
PCNAP12004 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
PCNAP12004 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC6.29□□□□□ -1.4
PCNAP12004 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC6.29□□□□□ -1.4
PCNAP12004 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC6.29□□□□□ -1.4
PCNAP12004 PPIAP14-201ENST00000577627 496 ntBASIC6.29□□□□□ -1.4
PCNAP12004 RN7SL32P-201ENST00000580514 281 ntBASIC6.29□□□□□ -1.4
PCNAP12004 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC6.29□□□□□ -1.4
PCNAP12004 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC6.29□□□□□ -1.4
PCNAP12004 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC6.29□□□□□ -1.4
PCNAP12004 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC6.29□□□□□ -1.4
PCNAP12004 AC007671.1-201ENST00000616957 830 ntBASIC6.29□□□□□ -1.4
PCNAP12004 MIR7854-201ENST00000620068 65 ntBASIC6.29□□□□□ -1.4
PCNAP12004 AC011504.1-201ENST00000623331 4103 ntBASIC6.29□□□□□ -1.4
PCNAP12004 AC018659.2-201ENST00000624690 715 ntBASIC6.29□□□□□ -1.4
PCNAP12004 AL049541.1-201ENST00000630976 642 ntTSL 2 BASIC6.29□□□□□ -1.4
PCNAP12004 AP001153.1-201ENST00000641024 338 ntBASIC6.29□□□□□ -1.4
PCNAP12004 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
PCNAP12004 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
PCNAP12004 AC006511.3-201ENST00000624929 1783 ntBASIC6.29□□□□□ -1.4
PCNAP12004 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
PCNAP12004 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC6.28□□□□□ -1.4
PCNAP12004 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
PCNAP12004 GRXCR2-201ENST00000377976 2002 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
PCNAP12004 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
PCNAP12004 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
PCNAP12004 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC6.28□□□□□ -1.4
PCNAP12004 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC6.28□□□□□ -1.4
PCNAP12004 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
PCNAP12004 RBPJP6-201ENST00000411556 1431 ntBASIC6.28□□□□□ -1.4
PCNAP12004 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC6.28□□□□□ -1.4
PCNAP12004 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
PCNAP12004 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC6.28□□□□□ -1.4
PCNAP12004 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
PCNAP12004 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
PCNAP12004 PPIAP24-201ENST00000328558 471 ntBASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms