Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC5.78□□□□□ -1.48
SPTA1P02549 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC5.78□□□□□ -1.48
SPTA1P02549 RN7SL208P-201ENST00000577964 296 ntBASIC5.78□□□□□ -1.48
SPTA1P02549 OR8G3P-202ENST00000641572 1255 ntBASIC5.78□□□□□ -1.48
SPTA1P02549 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.78□□□□□ -1.48
SPTA1P02549 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC5.78□□□□□ -1.48
SPTA1P02549 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC5.78□□□□□ -1.48
SPTA1P02549 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SPTA1P02549 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.78□□□□□ -1.48
SPTA1P02549 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC5.78□□□□□ -1.48
SPTA1P02549 DCAF13-210ENST00000618975 2038 ntTSL 2 BASIC5.78□□□□□ -1.48
SPTA1P02549 BPTF-203ENST00000335221 2627 ntTSL 5 BASIC5.78□□□□□ -1.48
SPTA1P02549 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SPTA1P02549 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC5.78□□□□□ -1.48
SPTA1P02549 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SPTA1P02549 AC130365.1-201ENST00000530524 1553 ntBASIC5.78□□□□□ -1.48
SPTA1P02549 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
SPTA1P02549 PDE11A-212ENST00000358450 3489 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SPTA1P02549 NPIPB6-201ENST00000532254 2016 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SPTA1P02549 RBBP4P4-201ENST00000398588 1289 ntBASIC5.77□□□□□ -1.49
SPTA1P02549 AC096537.2-201ENST00000413707 714 ntBASIC5.77□□□□□ -1.49
SPTA1P02549 BMS1P17-202ENST00000416720 316 ntBASIC5.77□□□□□ -1.49
SPTA1P02549 AC091390.1-201ENST00000433904 331 ntBASIC5.77□□□□□ -1.49
SPTA1P02549 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC5.77□□□□□ -1.49
SPTA1P02549 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.77□□□□□ -1.49
SPTA1P02549 YWHAEP1-201ENST00000453697 763 ntBASIC5.77□□□□□ -1.49
SPTA1P02549 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC5.77□□□□□ -1.49
SPTA1P02549 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
SPTA1P02549 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SPTA1P02549 PVT1-214ENST00000522875 922 ntTSL 5 BASIC5.77□□□□□ -1.49
SPTA1P02549 AC084816.1-202ENST00000536744 647 ntTSL 2 BASIC5.77□□□□□ -1.49
SPTA1P02549 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC5.77□□□□□ -1.49
SPTA1P02549 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC5.77□□□□□ -1.49
SPTA1P02549 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC5.77□□□□□ -1.49
SPTA1P02549 FXNP1-201ENST00000555153 337 ntBASIC5.77□□□□□ -1.49
SPTA1P02549 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC5.77□□□□□ -1.49
SPTA1P02549 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
SPTA1P02549 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC5.77□□□□□ -1.49
SPTA1P02549 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC5.77□□□□□ -1.49
SPTA1P02549 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC5.77□□□□□ -1.49
SPTA1P02549 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SPTA1P02549 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SPTA1P02549 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC5.77□□□□□ -1.49
SPTA1P02549 TMBIM6-209ENST00000547798 2494 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
SPTA1P02549 ADGRA3-209ENST00000508133 1572 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SPTA1P02549 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.49
SPTA1P02549 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.77□□□□□ -1.49
SPTA1P02549 AC093278.2-201ENST00000564956 2485 ntBASIC5.77□□□□□ -1.49
SPTA1P02549 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
SPTA1P02549 ACKR2-202ENST00000442925 2879 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SPTA1P02549 SPARCL1-201ENST00000282470 2906 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SPTA1P02549 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
SPTA1P02549 RNA5SP500-201ENST00000364486 119 ntBASIC5.77□□□□□ -1.49
SPTA1P02549 FAM96B-201ENST00000422424 676 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SPTA1P02549 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC5.77□□□□□ -1.49
SPTA1P02549 AC245452.2-201ENST00000435222 392 ntBASIC5.77□□□□□ -1.49
SPTA1P02549 CRYGGP-201ENST00000443337 145 ntBASIC5.77□□□□□ -1.49
SPTA1P02549 TRIM60P16-201ENST00000444048 694 ntBASIC5.77□□□□□ -1.49
SPTA1P02549 AZGP1P2-201ENST00000454506 345 ntBASIC5.77□□□□□ -1.49
SPTA1P02549 ACA64.1-201ENST00000459171 127 ntBASIC5.77□□□□□ -1.49
SPTA1P02549 RPL35AP28-201ENST00000459730 331 ntBASIC5.77□□□□□ -1.49
SPTA1P02549 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC5.77□□□□□ -1.49
SPTA1P02549 PDE4DIP-208ENST00000464103 1055 ntTSL 5 BASIC5.77□□□□□ -1.49
SPTA1P02549 UCK2-205ENST00000469256 753 ntTSL 3 BASIC5.77□□□□□ -1.49
SPTA1P02549 AC022206.1-201ENST00000495947 347 ntBASIC5.77□□□□□ -1.49
SPTA1P02549 AC119674.1-201ENST00000641611 1210 ntBASIC5.77□□□□□ -1.49
SPTA1P02549 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SPTA1P02549 FDFT1-208ENST00000525777 1472 ntTSL 2 BASIC5.77□□□□□ -1.49
SPTA1P02549 AL133243.2-201ENST00000610331 1621 ntBASIC5.77□□□□□ -1.49
SPTA1P02549 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
SPTA1P02549 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SPTA1P02549 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
SPTA1P02549 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SPTA1P02549 AC015871.4-201ENST00000624650 2260 ntBASIC5.76□□□□□ -1.49
SPTA1P02549 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC5.76□□□□□ -1.49
SPTA1P02549 AL359694.2-201ENST00000567753 1615 ntBASIC5.76□□□□□ -1.49
SPTA1P02549 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.76□□□□□ -1.49
SPTA1P02549 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
SPTA1P02549 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
SPTA1P02549 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SPTA1P02549 FBXL21-201ENST00000297158 1305 ntBASIC5.76□□□□□ -1.49
SPTA1P02549 MIR375-201ENST00000362103 64 ntBASIC5.76□□□□□ -1.49
SPTA1P02549 RNA5SP46-201ENST00000362370 120 ntBASIC5.76□□□□□ -1.49
SPTA1P02549 VTRNA3-1P-201ENST00000362552 102 ntBASIC5.76□□□□□ -1.49
SPTA1P02549 RNA5SP65-201ENST00000363166 119 ntBASIC5.76□□□□□ -1.49
SPTA1P02549 C1orf162-202ENST00000369718 915 ntAPPRIS ALT2 TSL 2 BASIC5.76□□□□□ -1.49
SPTA1P02549 LSM5-203ENST00000409782 649 ntTSL 5 BASIC5.76□□□□□ -1.49
SPTA1P02549 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC5.76□□□□□ -1.49
SPTA1P02549 RPL12P3-201ENST00000440080 396 ntBASIC5.76□□□□□ -1.49
SPTA1P02549 AC064862.4-201ENST00000442180 334 ntBASIC5.76□□□□□ -1.49
SPTA1P02549 CBX1P2-201ENST00000453841 458 ntBASIC5.76□□□□□ -1.49
SPTA1P02549 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.76□□□□□ -1.49
SPTA1P02549 AC011476.1-201ENST00000466725 307 ntBASIC5.76□□□□□ -1.49
SPTA1P02549 RN7SL643P-201ENST00000471845 291 ntBASIC5.76□□□□□ -1.49
SPTA1P02549 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC5.76□□□□□ -1.49
SPTA1P02549 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC5.76□□□□□ -1.49
SPTA1P02549 SCARNA18.1-201ENST00000516330 83 ntBASIC5.76□□□□□ -1.49
SPTA1P02549 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
SPTA1P02549 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC5.76□□□□□ -1.49
SPTA1P02549 AL356801.1-201ENST00000559320 294 ntBASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms