Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 CYP4F30P-202ENST00000420048 405 ntBASIC5.93□□□□□ -1.46
NKX2-2O95096 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC5.93□□□□□ -1.46
NKX2-2O95096 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
NKX2-2O95096 OR6R1P-201ENST00000431838 940 ntBASIC5.93□□□□□ -1.46
NKX2-2O95096 AL031681.1-201ENST00000443304 400 ntBASIC5.93□□□□□ -1.46
NKX2-2O95096 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC5.93□□□□□ -1.46
NKX2-2O95096 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
NKX2-2O95096 AC074386.1-206ENST00000487102 761 ntBASIC5.93□□□□□ -1.46
NKX2-2O95096 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
NKX2-2O95096 PANCR-201ENST00000503456 493 ntTSL 5 BASIC5.93□□□□□ -1.46
NKX2-2O95096 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC5.93□□□□□ -1.46
NKX2-2O95096 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
NKX2-2O95096 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC5.93□□□□□ -1.46
NKX2-2O95096 AC009879.1-201ENST00000520029 839 ntBASIC5.93□□□□□ -1.46
NKX2-2O95096 AC026688.1-201ENST00000520639 1168 ntBASIC5.93□□□□□ -1.46
NKX2-2O95096 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC5.93□□□□□ -1.46
NKX2-2O95096 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
NKX2-2O95096 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
NKX2-2O95096 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
NKX2-2O95096 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC5.93□□□□□ -1.46
NKX2-2O95096 HMGN1P26-201ENST00000558737 303 ntBASIC5.93□□□□□ -1.46
NKX2-2O95096 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC5.93□□□□□ -1.46
NKX2-2O95096 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC5.93□□□□□ -1.46
NKX2-2O95096 MIR4732-201ENST00000581873 76 ntBASIC5.93□□□□□ -1.46
NKX2-2O95096 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC5.93□□□□□ -1.46
NKX2-2O95096 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC5.93□□□□□ -1.46
NKX2-2O95096 AL008723.3-201ENST00000608926 449 ntBASIC5.93□□□□□ -1.46
NKX2-2O95096 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC5.93□□□□□ -1.46
NKX2-2O95096 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
NKX2-2O95096 MIR6885-201ENST00000612241 66 ntBASIC5.93□□□□□ -1.46
NKX2-2O95096 AP001885.1-201ENST00000621658 558 ntBASIC5.93□□□□□ -1.46
NKX2-2O95096 HPVC1-201ENST00000629899 1198 ntBASIC5.93□□□□□ -1.46
NKX2-2O95096 AC217777.1-201ENST00000570034 1471 ntBASIC5.93□□□□□ -1.46
NKX2-2O95096 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC5.93□□□□□ -1.46
NKX2-2O95096 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
NKX2-2O95096 AC009779.8-201ENST00000641684 4384 ntBASIC5.93□□□□□ -1.46
NKX2-2O95096 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
NKX2-2O95096 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
NKX2-2O95096 CA1-225ENST00000626824 2405 ntTSL 5 BASIC5.93□□□□□ -1.46
NKX2-2O95096 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
NKX2-2O95096 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
NKX2-2O95096 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
NKX2-2O95096 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC5.92□□□□□ -1.46
NKX2-2O95096 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
NKX2-2O95096 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
NKX2-2O95096 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC5.92□□□□□ -1.46
NKX2-2O95096 AC068490.1-202ENST00000637384 3185 ntTSL 5 BASIC5.92□□□□□ -1.46
NKX2-2O95096 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC5.92□□□□□ -1.46
NKX2-2O95096 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC5.92□□□□□ -1.46
NKX2-2O95096 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
NKX2-2O95096 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC5.92□□□□□ -1.46
NKX2-2O95096 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
NKX2-2O95096 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
NKX2-2O95096 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
NKX2-2O95096 ERG-202ENST00000398897 4651 ntTSL 5 BASIC5.92□□□□□ -1.46
NKX2-2O95096 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
NKX2-2O95096 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
NKX2-2O95096 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
NKX2-2O95096 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
NKX2-2O95096 RNU6-697P-201ENST00000363348 107 ntBASIC5.92□□□□□ -1.46
NKX2-2O95096 RNU6-618P-201ENST00000363518 112 ntBASIC5.92□□□□□ -1.46
NKX2-2O95096 RNA5SP478-201ENST00000364657 115 ntBASIC5.92□□□□□ -1.46
NKX2-2O95096 AC007068.1-201ENST00000396690 844 ntBASIC5.92□□□□□ -1.46
NKX2-2O95096 RN7SKP161-201ENST00000411110 305 ntBASIC5.92□□□□□ -1.46
NKX2-2O95096 GPN3P1-201ENST00000423883 535 ntBASIC5.92□□□□□ -1.46
NKX2-2O95096 AL356157.1-201ENST00000456722 732 ntTSL 3 BASIC5.92□□□□□ -1.46
NKX2-2O95096 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC5.92□□□□□ -1.46
NKX2-2O95096 RN7SL393P-201ENST00000463588 296 ntBASIC5.92□□□□□ -1.46
NKX2-2O95096 AC015524.1-201ENST00000491585 472 ntBASIC5.92□□□□□ -1.46
NKX2-2O95096 AC096576.2-201ENST00000511835 948 ntTSL 3 BASIC5.92□□□□□ -1.46
NKX2-2O95096 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
NKX2-2O95096 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC5.92□□□□□ -1.46
NKX2-2O95096 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC5.92□□□□□ -1.46
NKX2-2O95096 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC5.92□□□□□ -1.46
NKX2-2O95096 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC5.92□□□□□ -1.46
NKX2-2O95096 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC5.92□□□□□ -1.46
NKX2-2O95096 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
NKX2-2O95096 OOSP1P2-201ENST00000579644 351 ntBASIC5.92□□□□□ -1.46
NKX2-2O95096 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC5.92□□□□□ -1.46
NKX2-2O95096 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC5.92□□□□□ -1.46
NKX2-2O95096 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC5.92□□□□□ -1.46
NKX2-2O95096 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC5.92□□□□□ -1.46
NKX2-2O95096 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
NKX2-2O95096 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
NKX2-2O95096 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
NKX2-2O95096 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC5.92□□□□□ -1.46
NKX2-2O95096 AC011815.2-201ENST00000618230 2021 ntBASIC5.92□□□□□ -1.46
NKX2-2O95096 AC011369.2-201ENST00000624423 1567 ntBASIC5.92□□□□□ -1.46
NKX2-2O95096 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC5.92□□□□□ -1.46
NKX2-2O95096 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
NKX2-2O95096 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC5.92□□□□□ -1.46
NKX2-2O95096 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC5.92□□□□□ -1.46
NKX2-2O95096 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
NKX2-2O95096 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
NKX2-2O95096 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
NKX2-2O95096 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
NKX2-2O95096 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
NKX2-2O95096 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC5.91□□□□□ -1.46
NKX2-2O95096 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
NKX2-2O95096 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms