Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC5.88□□□□□ -1.47
SSX4O60224 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC5.88□□□□□ -1.47
SSX4O60224 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC5.88□□□□□ -1.47
SSX4O60224 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC5.88□□□□□ -1.47
SSX4O60224 RPL7AP69-201ENST00000595306 806 ntBASIC5.88□□□□□ -1.47
SSX4O60224 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC5.88□□□□□ -1.47
SSX4O60224 TSPAN6-205ENST00000614008 900 ntTSL 5 BASIC5.88□□□□□ -1.47
SSX4O60224 AP005212.3-201ENST00000619964 528 ntBASIC5.88□□□□□ -1.47
SSX4O60224 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC5.88□□□□□ -1.47
SSX4O60224 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC5.88□□□□□ -1.47
SSX4O60224 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.88□□□□□ -1.47
SSX4O60224 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
SSX4O60224 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SSX4O60224 AC102941.1-201ENST00000567616 1537 ntBASIC5.88□□□□□ -1.47
SSX4O60224 GRPR-201ENST00000380289 1929 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SSX4O60224 DTNA-201ENST00000269192 1964 ntTSL 2 BASIC5.87□□□□□ -1.47
SSX4O60224 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SSX4O60224 THAP12P8-201ENST00000447914 2115 ntBASIC5.87□□□□□ -1.47
SSX4O60224 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
SSX4O60224 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SSX4O60224 DLEU2L-201ENST00000371086 3555 ntBASIC5.87□□□□□ -1.47
SSX4O60224 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SSX4O60224 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.87□□□□□ -1.47
SSX4O60224 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC5.87□□□□□ -1.47
SSX4O60224 FABP3-201ENST00000373713 725 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SSX4O60224 NALCN-202ENST00000376200 1126 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SSX4O60224 AC026310.1-201ENST00000396004 378 ntBASIC5.87□□□□□ -1.47
SSX4O60224 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC5.87□□□□□ -1.47
SSX4O60224 AC096537.2-201ENST00000413707 714 ntBASIC5.87□□□□□ -1.47
SSX4O60224 CDC42P6-201ENST00000421246 576 ntBASIC5.87□□□□□ -1.47
SSX4O60224 RPL7AP51-201ENST00000422016 760 ntBASIC5.87□□□□□ -1.47
SSX4O60224 AL021707.2-202ENST00000422408 1080 ntTSL 3 BASIC5.87□□□□□ -1.47
SSX4O60224 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC5.87□□□□□ -1.47
SSX4O60224 AC097721.1-201ENST00000427150 1253 ntBASIC5.87□□□□□ -1.47
SSX4O60224 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC5.87□□□□□ -1.47
SSX4O60224 AL138899.2-201ENST00000439139 499 ntBASIC5.87□□□□□ -1.47
SSX4O60224 AC245291.3-201ENST00000443400 292 ntBASIC5.87□□□□□ -1.47
SSX4O60224 HBG2-204ENST00000444587 307 ntTSL 2 BASIC5.87□□□□□ -1.47
SSX4O60224 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC5.87□□□□□ -1.47
SSX4O60224 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC5.87□□□□□ -1.47
SSX4O60224 ZNF197-AS1-201ENST00000447691 623 ntTSL 5 BASIC5.87□□□□□ -1.47
SSX4O60224 OR6C72P-201ENST00000451403 892 ntBASIC5.87□□□□□ -1.47
SSX4O60224 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC5.87□□□□□ -1.47
SSX4O60224 AL391422.2-202ENST00000454396 347 ntTSL 5 BASIC5.87□□□□□ -1.47
SSX4O60224 RBMY2HP-201ENST00000457961 720 ntBASIC5.87□□□□□ -1.47
SSX4O60224 RPL34P34-201ENST00000465389 354 ntBASIC5.87□□□□□ -1.47
SSX4O60224 RN7SL83P-201ENST00000468131 297 ntBASIC5.87□□□□□ -1.47
SSX4O60224 AC007688.1-201ENST00000475592 759 ntBASIC5.87□□□□□ -1.47
SSX4O60224 AC084024.1-201ENST00000476186 621 ntTSL 5 BASIC5.87□□□□□ -1.47
SSX4O60224 AP005202.1-201ENST00000489915 867 ntBASIC5.87□□□□□ -1.47
SSX4O60224 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC5.87□□□□□ -1.47
SSX4O60224 AC010442.1-201ENST00000515583 816 ntBASIC5.87□□□□□ -1.47
SSX4O60224 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC5.87□□□□□ -1.47
SSX4O60224 AC007537.1-201ENST00000539347 327 ntBASIC5.87□□□□□ -1.47
SSX4O60224 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC5.87□□□□□ -1.47
SSX4O60224 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC5.87□□□□□ -1.47
SSX4O60224 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC5.87□□□□□ -1.47
SSX4O60224 AL049874.4-201ENST00000557593 255 ntBASIC5.87□□□□□ -1.47
SSX4O60224 AC013652.1-204ENST00000558209 489 ntTSL 3 BASIC5.87□□□□□ -1.47
SSX4O60224 AC026770.1-201ENST00000558994 581 ntTSL 4 BASIC5.87□□□□□ -1.47
SSX4O60224 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC5.87□□□□□ -1.47
SSX4O60224 LINC01919-201ENST00000578610 568 ntTSL 5 BASIC5.87□□□□□ -1.47
SSX4O60224 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC5.87□□□□□ -1.47
SSX4O60224 AC011500.1-201ENST00000601963 469 ntBASIC5.87□□□□□ -1.47
SSX4O60224 AC097467.4-201ENST00000605504 141 ntBASIC5.87□□□□□ -1.47
SSX4O60224 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SSX4O60224 MIR6823-201ENST00000622118 61 ntBASIC5.87□□□□□ -1.47
SSX4O60224 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC5.87□□□□□ -1.47
SSX4O60224 AL355834.1-201ENST00000556602 3965 ntBASIC5.87□□□□□ -1.47
SSX4O60224 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC5.87□□□□□ -1.47
SSX4O60224 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SSX4O60224 AC090181.3-201ENST00000624777 1514 ntBASIC5.87□□□□□ -1.47
SSX4O60224 ATP5BP1-201ENST00000411980 1574 ntBASIC5.87□□□□□ -1.47
SSX4O60224 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC5.87□□□□□ -1.47
SSX4O60224 AL513548.1-201ENST00000562904 1724 ntBASIC5.87□□□□□ -1.47
SSX4O60224 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
SSX4O60224 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SSX4O60224 AC006600.2-201ENST00000624834 2506 ntBASIC5.87□□□□□ -1.47
SSX4O60224 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
SSX4O60224 AL157831.2-201ENST00000564681 3095 ntBASIC5.87□□□□□ -1.47
SSX4O60224 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SSX4O60224 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.87□□□□□ -1.47
SSX4O60224 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
SSX4O60224 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.87□□□□□ -1.47
SSX4O60224 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SSX4O60224 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SSX4O60224 AL359263.1-201ENST00000441188 2796 ntBASIC5.86□□□□□ -1.47
SSX4O60224 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC5.86□□□□□ -1.47
SSX4O60224 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC5.86□□□□□ -1.47
SSX4O60224 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC5.86□□□□□ -1.47
SSX4O60224 CREM-203ENST00000344351 1625 ntTSL 2 BASIC5.86□□□□□ -1.47
SSX4O60224 TTTY10-202ENST00000455084 1628 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SSX4O60224 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
SSX4O60224 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
SSX4O60224 CAP1P2-201ENST00000417455 1409 ntBASIC5.86□□□□□ -1.47
SSX4O60224 FANCD2P2-201ENST00000437591 1400 ntBASIC5.86□□□□□ -1.47
SSX4O60224 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC5.86□□□□□ -1.47
SSX4O60224 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
SSX4O60224 EEF1A1P12-201ENST00000443590 1346 ntBASIC5.86□□□□□ -1.47
SSX4O60224 SAMMSON-210ENST00000641260 1308 ntBASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms