Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC6.75□□□□□ -1.33
PCDHB1Q9Y5F3 AC026770.1-201ENST00000558994 581 ntTSL 4 BASIC6.75□□□□□ -1.33
PCDHB1Q9Y5F3 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
PCDHB1Q9Y5F3 AC026992.2-201ENST00000570122 766 ntTSL 5 BASIC6.75□□□□□ -1.33
PCDHB1Q9Y5F3 AC011443.1-201ENST00000599484 365 ntTSL 3 BASIC6.75□□□□□ -1.33
PCDHB1Q9Y5F3 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC6.75□□□□□ -1.33
PCDHB1Q9Y5F3 AL158050.2-201ENST00000605336 568 ntBASIC6.75□□□□□ -1.33
PCDHB1Q9Y5F3 uc_338.29-201ENST00000615099 168 ntBASIC6.75□□□□□ -1.33
PCDHB1Q9Y5F3 MIR6806-201ENST00000622141 64 ntBASIC6.75□□□□□ -1.33
PCDHB1Q9Y5F3 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
PCDHB1Q9Y5F3 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
PCDHB1Q9Y5F3 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC6.75□□□□□ -1.33
PCDHB1Q9Y5F3 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
PCDHB1Q9Y5F3 AL049634.1-201ENST00000453770 1720 ntBASIC6.75□□□□□ -1.33
PCDHB1Q9Y5F3 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC6.75□□□□□ -1.33
PCDHB1Q9Y5F3 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
PCDHB1Q9Y5F3 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC6.75□□□□□ -1.33
PCDHB1Q9Y5F3 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC6.75□□□□□ -1.33
PCDHB1Q9Y5F3 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
PCDHB1Q9Y5F3 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
PCDHB1Q9Y5F3 AL391262.1-201ENST00000556558 1992 ntBASIC6.75□□□□□ -1.33
PCDHB1Q9Y5F3 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
PCDHB1Q9Y5F3 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
PCDHB1Q9Y5F3 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC6.74□□□□□ -1.33
PCDHB1Q9Y5F3 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
PCDHB1Q9Y5F3 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
PCDHB1Q9Y5F3 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
PCDHB1Q9Y5F3 IAPP-205ENST00000542023 2015 ntTSL 2 BASIC6.74□□□□□ -1.33
PCDHB1Q9Y5F3 KAT14-202ENST00000435364 3618 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
PCDHB1Q9Y5F3 AL359195.2-201ENST00000623657 4412 ntBASIC6.74□□□□□ -1.33
PCDHB1Q9Y5F3 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
PCDHB1Q9Y5F3 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
PCDHB1Q9Y5F3 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
PCDHB1Q9Y5F3 FO082842.1-201ENST00000423552 1370 ntBASIC6.74□□□□□ -1.33
PCDHB1Q9Y5F3 MAGEB10-202ENST00000614159 1389 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
PCDHB1Q9Y5F3 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
PCDHB1Q9Y5F3 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
PCDHB1Q9Y5F3 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC6.74□□□□□ -1.33
PCDHB1Q9Y5F3 RNA5SP232-201ENST00000364144 119 ntBASIC6.74□□□□□ -1.33
PCDHB1Q9Y5F3 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC6.74□□□□□ -1.33
PCDHB1Q9Y5F3 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
PCDHB1Q9Y5F3 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
PCDHB1Q9Y5F3 MLXIP-203ENST00000377037 805 ntTSL 5 BASIC6.74□□□□□ -1.33
PCDHB1Q9Y5F3 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
PCDHB1Q9Y5F3 AC069282.1-201ENST00000411911 526 ntBASIC6.74□□□□□ -1.33
PCDHB1Q9Y5F3 BX284668.3-201ENST00000414128 882 ntTSL 5 BASIC6.74□□□□□ -1.33
PCDHB1Q9Y5F3 AL713922.1-201ENST00000416477 747 ntBASIC6.74□□□□□ -1.33
PCDHB1Q9Y5F3 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC6.74□□□□□ -1.33
PCDHB1Q9Y5F3 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC6.74□□□□□ -1.33
PCDHB1Q9Y5F3 RPSAP32-201ENST00000432681 526 ntBASIC6.74□□□□□ -1.33
PCDHB1Q9Y5F3 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC6.74□□□□□ -1.33
PCDHB1Q9Y5F3 AC128677.1-201ENST00000436016 442 ntBASIC6.74□□□□□ -1.33
PCDHB1Q9Y5F3 NPM1P23-201ENST00000440193 849 ntBASIC6.74□□□□□ -1.33
PCDHB1Q9Y5F3 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC6.74□□□□□ -1.33
PCDHB1Q9Y5F3 XKRY2-201ENST00000442362 1093 ntBASIC6.74□□□□□ -1.33
PCDHB1Q9Y5F3 CLIC4P1-201ENST00000453177 535 ntBASIC6.74□□□□□ -1.33
PCDHB1Q9Y5F3 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC6.74□□□□□ -1.33
PCDHB1Q9Y5F3 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC6.74□□□□□ -1.33
PCDHB1Q9Y5F3 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC6.74□□□□□ -1.33
PCDHB1Q9Y5F3 RN7SL390P-201ENST00000470634 284 ntBASIC6.74□□□□□ -1.33
PCDHB1Q9Y5F3 RN7SL216P-201ENST00000471607 298 ntBASIC6.74□□□□□ -1.33
PCDHB1Q9Y5F3 OR7E22P-201ENST00000478335 1035 ntBASIC6.74□□□□□ -1.33
PCDHB1Q9Y5F3 RN7SL654P-201ENST00000479178 292 ntBASIC6.74□□□□□ -1.33
PCDHB1Q9Y5F3 HAUS1P1-201ENST00000505275 832 ntBASIC6.74□□□□□ -1.33
PCDHB1Q9Y5F3 AC139713.2-212ENST00000506982 832 ntTSL 5 BASIC6.74□□□□□ -1.33
PCDHB1Q9Y5F3 SNX18P23-201ENST00000510867 677 ntBASIC6.74□□□□□ -1.33
PCDHB1Q9Y5F3 AC112198.4-201ENST00000515450 351 ntBASIC6.74□□□□□ -1.33
PCDHB1Q9Y5F3 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
PCDHB1Q9Y5F3 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC6.74□□□□□ -1.33
PCDHB1Q9Y5F3 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC6.74□□□□□ -1.33
PCDHB1Q9Y5F3 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC6.74□□□□□ -1.33
PCDHB1Q9Y5F3 OR4A41P-201ENST00000533053 928 ntBASIC6.74□□□□□ -1.33
PCDHB1Q9Y5F3 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC6.74□□□□□ -1.33
PCDHB1Q9Y5F3 AC009729.1-201ENST00000548873 1133 ntBASIC6.74□□□□□ -1.33
PCDHB1Q9Y5F3 PPIAP6-201ENST00000557078 499 ntBASIC6.74□□□□□ -1.33
PCDHB1Q9Y5F3 MIR5095-201ENST00000578844 88 ntBASIC6.74□□□□□ -1.33
PCDHB1Q9Y5F3 CTSLP2-201ENST00000580501 394 ntBASIC6.74□□□□□ -1.33
PCDHB1Q9Y5F3 PLEKHA3P1-201ENST00000598554 894 ntBASIC6.74□□□□□ -1.33
PCDHB1Q9Y5F3 AL096803.3-201ENST00000609032 532 ntBASIC6.74□□□□□ -1.33
PCDHB1Q9Y5F3 AC097641.3-201ENST00000613523 464 ntBASIC6.74□□□□□ -1.33
PCDHB1Q9Y5F3 Six3os1_4.1-201ENST00000615706 324 ntBASIC6.74□□□□□ -1.33
PCDHB1Q9Y5F3 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC6.74□□□□□ -1.33
PCDHB1Q9Y5F3 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC6.74□□□□□ -1.33
PCDHB1Q9Y5F3 DAPL1-204ENST00000621326 671 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
PCDHB1Q9Y5F3 AC073862.4-201ENST00000622982 854 ntBASIC6.74□□□□□ -1.33
PCDHB1Q9Y5F3 AL683826.1-201ENST00000624104 627 ntBASIC6.74□□□□□ -1.33
PCDHB1Q9Y5F3 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC6.74□□□□□ -1.33
PCDHB1Q9Y5F3 AL078581.3-201ENST00000627304 744 ntTSL 5 BASIC6.74□□□□□ -1.33
PCDHB1Q9Y5F3 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
PCDHB1Q9Y5F3 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC6.74□□□□□ -1.33
PCDHB1Q9Y5F3 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC6.74□□□□□ -1.33
PCDHB1Q9Y5F3 RAB2B-201ENST00000397762 2928 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
PCDHB1Q9Y5F3 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
PCDHB1Q9Y5F3 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
PCDHB1Q9Y5F3 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
PCDHB1Q9Y5F3 LPAL2-203ENST00000454031 2498 ntBASIC6.74□□□□□ -1.33
PCDHB1Q9Y5F3 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
PCDHB1Q9Y5F3 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
PCDHB1Q9Y5F3 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
PCDHB1Q9Y5F3 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC6.74□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms