Protein–RNA interactions for Protein: Q9HCM9

TRIM39, E3 ubiquitin-protein ligase TRIM39, humanhuman

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39Q9HCM9 AC011824.1-201ENST00000584863 561 ntTSL 4 BASIC6.97□□□□□ -1.29
TRIM39Q9HCM9 AP001357.1-201ENST00000586304 1053 ntBASIC6.97□□□□□ -1.29
TRIM39Q9HCM9 Metazoa_SRP.57-201ENST00000597717 283 ntBASIC6.97□□□□□ -1.29
TRIM39Q9HCM9 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC6.97□□□□□ -1.29
TRIM39Q9HCM9 AL160237.3-201ENST00000604114 1013 ntBASIC6.97□□□□□ -1.29
TRIM39Q9HCM9 Z82195.1-201ENST00000604558 398 ntBASIC6.97□□□□□ -1.29
TRIM39Q9HCM9 CPB2-AS1-202ENST00000606243 2185 ntTSL 2 BASIC6.97□□□□□ -1.29
TRIM39Q9HCM9 AC093635.1-201ENST00000609028 555 ntBASIC6.97□□□□□ -1.29
TRIM39Q9HCM9 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC6.97□□□□□ -1.29
TRIM39Q9HCM9 GPX6-204ENST00000612264 1709 ntAPPRIS ALT1 TSL 5 BASIC6.97□□□□□ -1.29
TRIM39Q9HCM9 MAPK10-323ENST00000641493 3207 ntBASIC6.97□□□□□ -1.29
TRIM39Q9HCM9 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
TRIM39Q9HCM9 DCSTAMP-208ENST00000622554 1471 ntTSL 5 BASIC6.97□□□□□ -1.29
TRIM39Q9HCM9 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC6.97□□□□□ -1.29
TRIM39Q9HCM9 AC245100.4-202ENST00000634638 1342 ntTSL 5 BASIC6.97□□□□□ -1.29
TRIM39Q9HCM9 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
TRIM39Q9HCM9 BEST3-212ENST00000553096 2929 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
TRIM39Q9HCM9 DAZ1-203ENST00000426000 1846 ntTSL 5 BASIC6.97□□□□□ -1.29
TRIM39Q9HCM9 AC003985.2-201ENST00000562268 1669 ntBASIC6.96□□□□□ -1.29
TRIM39Q9HCM9 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.29
TRIM39Q9HCM9 CASC19-243ENST00000641588 1546 ntBASIC6.96□□□□□ -1.29
TRIM39Q9HCM9 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
TRIM39Q9HCM9 SATL1-201ENST00000395409 2192 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.29
TRIM39Q9HCM9 TMEM155-203ENST00000394396 2032 ntAPPRIS P2 TSL 2 BASIC6.96□□□□□ -1.29
TRIM39Q9HCM9 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC6.96□□□□□ -1.29
TRIM39Q9HCM9 EZH1-222ENST00000592743 2501 ntAPPRIS P1 TSL 2 BASIC6.96□□□□□ -1.29
TRIM39Q9HCM9 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.29
TRIM39Q9HCM9 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
TRIM39Q9HCM9 MAMDC2-AS1-202ENST00000414515 2097 ntTSL 5 BASIC6.96□□□□□ -1.29
TRIM39Q9HCM9 ZNF658B-201ENST00000602828 3408 ntBASIC6.96□□□□□ -1.3
TRIM39Q9HCM9 LINC01968-202ENST00000423318 3647 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
TRIM39Q9HCM9 AL133243.4-201ENST00000623116 3109 ntBASIC6.96□□□□□ -1.3
TRIM39Q9HCM9 MTMR8-201ENST00000374852 2639 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
TRIM39Q9HCM9 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC6.96□□□□□ -1.3
TRIM39Q9HCM9 HESX1-201ENST00000295934 981 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
TRIM39Q9HCM9 MTHFD2P5-201ENST00000320415 844 ntBASIC6.96□□□□□ -1.3
TRIM39Q9HCM9 RPL7-201ENST00000352983 1101 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
TRIM39Q9HCM9 AL590762.1-201ENST00000391782 432 ntBASIC6.96□□□□□ -1.3
TRIM39Q9HCM9 RPL5P19-201ENST00000404228 893 ntBASIC6.96□□□□□ -1.3
TRIM39Q9HCM9 MRPL32P1-201ENST00000406301 247 ntBASIC6.96□□□□□ -1.3
TRIM39Q9HCM9 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC6.96□□□□□ -1.3
TRIM39Q9HCM9 AL158825.1-201ENST00000414735 521 ntBASIC6.96□□□□□ -1.3
TRIM39Q9HCM9 LIPT1P1-201ENST00000415870 1186 ntBASIC6.96□□□□□ -1.3
TRIM39Q9HCM9 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC6.96□□□□□ -1.3
TRIM39Q9HCM9 AL139042.1-201ENST00000429137 305 ntTSL 3 BASIC6.96□□□□□ -1.3
TRIM39Q9HCM9 RPL12P28-201ENST00000430852 489 ntBASIC6.96□□□□□ -1.3
TRIM39Q9HCM9 SDHC-204ENST00000432287 460 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
TRIM39Q9HCM9 CFLAR-212ENST00000440180 1198 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
TRIM39Q9HCM9 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC6.96□□□□□ -1.3
TRIM39Q9HCM9 AL353898.1-201ENST00000444055 238 ntBASIC6.96□□□□□ -1.3
TRIM39Q9HCM9 SEPT7P2-208ENST00000444755 505 ntTSL 3 BASIC6.96□□□□□ -1.3
TRIM39Q9HCM9 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC6.96□□□□□ -1.3
TRIM39Q9HCM9 TREML3P-201ENST00000457327 501 ntBASIC6.96□□□□□ -1.3
TRIM39Q9HCM9 SSR3-206ENST00000476217 807 ntTSL 3 BASIC6.96□□□□□ -1.3
TRIM39Q9HCM9 ZNF525-204ENST00000491101 569 ntTSL 4 BASIC6.96□□□□□ -1.3
TRIM39Q9HCM9 ADAM3A-209ENST00000497806 1245 ntTSL 5 BASIC6.96□□□□□ -1.3
TRIM39Q9HCM9 AC147055.3-201ENST00000510547 851 ntBASIC6.96□□□□□ -1.3
TRIM39Q9HCM9 AC114940.1-201ENST00000512162 1265 ntBASIC6.96□□□□□ -1.3
TRIM39Q9HCM9 NPM1P21-201ENST00000513394 762 ntBASIC6.96□□□□□ -1.3
TRIM39Q9HCM9 SETP21-201ENST00000514799 892 ntBASIC6.96□□□□□ -1.3
TRIM39Q9HCM9 RN7SKP11-201ENST00000517018 287 ntBASIC6.96□□□□□ -1.3
TRIM39Q9HCM9 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC6.96□□□□□ -1.3
TRIM39Q9HCM9 AC090193.1-202ENST00000524355 566 ntTSL 4 BASIC6.96□□□□□ -1.3
TRIM39Q9HCM9 CASP1P2-201ENST00000526830 1258 ntBASIC6.96□□□□□ -1.3
TRIM39Q9HCM9 AL135978.1-201ENST00000553618 1266 ntBASIC6.96□□□□□ -1.3
TRIM39Q9HCM9 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC6.96□□□□□ -1.3
TRIM39Q9HCM9 AC106734.1-201ENST00000568646 663 ntBASIC6.96□□□□□ -1.3
TRIM39Q9HCM9 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC6.96□□□□□ -1.3
TRIM39Q9HCM9 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC6.96□□□□□ -1.3
TRIM39Q9HCM9 AC027455.1-201ENST00000574104 594 ntBASIC6.96□□□□□ -1.3
TRIM39Q9HCM9 RN7SL426P-201ENST00000579106 295 ntBASIC6.96□□□□□ -1.3
TRIM39Q9HCM9 MIR378H-201ENST00000579966 83 ntBASIC6.96□□□□□ -1.3
TRIM39Q9HCM9 AC016383.1-201ENST00000582700 714 ntTSL 3 BASIC6.96□□□□□ -1.3
TRIM39Q9HCM9 AC004223.2-201ENST00000590309 544 ntBASIC6.96□□□□□ -1.3
TRIM39Q9HCM9 AC073387.2-201ENST00000604797 784 ntBASIC6.96□□□□□ -1.3
TRIM39Q9HCM9 Z99289.3-201ENST00000605586 594 ntBASIC6.96□□□□□ -1.3
TRIM39Q9HCM9 RNU4-5P-201ENST00000607255 135 ntBASIC6.96□□□□□ -1.3
TRIM39Q9HCM9 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC6.96□□□□□ -1.3
TRIM39Q9HCM9 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC6.96□□□□□ -1.3
TRIM39Q9HCM9 AC009039.2-201ENST00000624524 529 ntBASIC6.96□□□□□ -1.3
TRIM39Q9HCM9 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC6.96□□□□□ -1.3
TRIM39Q9HCM9 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC6.96□□□□□ -1.3
TRIM39Q9HCM9 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.3
TRIM39Q9HCM9 CASP10-208ENST00000448480 1603 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
TRIM39Q9HCM9 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.3
TRIM39Q9HCM9 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
TRIM39Q9HCM9 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
TRIM39Q9HCM9 TPTE2P2-201ENST00000403471 1466 ntBASIC6.96□□□□□ -1.3
TRIM39Q9HCM9 CEACAM20-205ENST00000620096 1494 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
TRIM39Q9HCM9 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
TRIM39Q9HCM9 KLHL7-203ENST00000409689 3231 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
TRIM39Q9HCM9 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC6.96□□□□□ -1.3
TRIM39Q9HCM9 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
TRIM39Q9HCM9 FBLN5-205ENST00000556154 1875 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
TRIM39Q9HCM9 AL121949.2-201ENST00000403446 1548 ntBASIC6.96□□□□□ -1.3
TRIM39Q9HCM9 B3GNT2-202ENST00000405767 2436 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
TRIM39Q9HCM9 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC6.96□□□□□ -1.3
TRIM39Q9HCM9 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
TRIM39Q9HCM9 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
TRIM39Q9HCM9 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms