Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC6.52□□□□□ -1.37
TRIM4Q9C037 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC6.52□□□□□ -1.37
TRIM4Q9C037 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
TRIM4Q9C037 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC6.52□□□□□ -1.37
TRIM4Q9C037 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC6.52□□□□□ -1.37
TRIM4Q9C037 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC6.52□□□□□ -1.37
TRIM4Q9C037 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC6.52□□□□□ -1.37
TRIM4Q9C037 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
TRIM4Q9C037 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC6.52□□□□□ -1.37
TRIM4Q9C037 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC6.52□□□□□ -1.37
TRIM4Q9C037 DTNA-201ENST00000269192 1964 ntTSL 2 BASIC6.51□□□□□ -1.37
TRIM4Q9C037 SNX25-207ENST00000618785 3151 ntTSL 5 BASIC6.51□□□□□ -1.37
TRIM4Q9C037 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
TRIM4Q9C037 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
TRIM4Q9C037 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC6.51□□□□□ -1.37
TRIM4Q9C037 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC6.51□□□□□ -1.37
TRIM4Q9C037 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
TRIM4Q9C037 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC6.51□□□□□ -1.37
TRIM4Q9C037 OR2L13-203ENST00000641893 1817 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
TRIM4Q9C037 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.51□□□□□ -1.37
TRIM4Q9C037 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
TRIM4Q9C037 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC6.51□□□□□ -1.37
TRIM4Q9C037 RNU1-5P-201ENST00000362684 144 ntBASIC6.51□□□□□ -1.37
TRIM4Q9C037 RNA5SP382-201ENST00000363355 112 ntBASIC6.51□□□□□ -1.37
TRIM4Q9C037 RN7SKP237-201ENST00000364663 301 ntBASIC6.51□□□□□ -1.37
TRIM4Q9C037 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC6.51□□□□□ -1.37
TRIM4Q9C037 MTIF3-203ENST00000405591 889 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
TRIM4Q9C037 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC6.51□□□□□ -1.37
TRIM4Q9C037 ZNF385D-AS1-201ENST00000412369 705 ntTSL 3 BASIC6.51□□□□□ -1.37
TRIM4Q9C037 VDAC1P10-201ENST00000416715 891 ntBASIC6.51□□□□□ -1.37
TRIM4Q9C037 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
TRIM4Q9C037 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC6.51□□□□□ -1.37
TRIM4Q9C037 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC6.51□□□□□ -1.37
TRIM4Q9C037 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC6.51□□□□□ -1.37
TRIM4Q9C037 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC6.51□□□□□ -1.37
TRIM4Q9C037 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC6.51□□□□□ -1.37
TRIM4Q9C037 BX323845.2-201ENST00000458382 234 ntBASIC6.51□□□□□ -1.37
TRIM4Q9C037 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC6.51□□□□□ -1.37
TRIM4Q9C037 AC008945.1-201ENST00000505144 499 ntBASIC6.51□□□□□ -1.37
TRIM4Q9C037 AC113367.2-201ENST00000505749 160 ntBASIC6.51□□□□□ -1.37
TRIM4Q9C037 AC112484.3-201ENST00000505910 329 ntBASIC6.51□□□□□ -1.37
TRIM4Q9C037 RN7SKP64-201ENST00000517206 328 ntBASIC6.51□□□□□ -1.37
TRIM4Q9C037 IGLVV-66-201ENST00000523818 341 ntBASIC6.51□□□□□ -1.37
TRIM4Q9C037 AC084121.1-201ENST00000533882 835 ntBASIC6.51□□□□□ -1.37
TRIM4Q9C037 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC6.51□□□□□ -1.37
TRIM4Q9C037 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC6.51□□□□□ -1.37
TRIM4Q9C037 LINC01919-201ENST00000578610 568 ntTSL 5 BASIC6.51□□□□□ -1.37
TRIM4Q9C037 AC120057.5-201ENST00000623840 154 ntBASIC6.51□□□□□ -1.37
TRIM4Q9C037 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
TRIM4Q9C037 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
TRIM4Q9C037 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
TRIM4Q9C037 UGT2B24P-201ENST00000514441 1597 ntBASIC6.51□□□□□ -1.37
TRIM4Q9C037 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC6.51□□□□□ -1.37
TRIM4Q9C037 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC6.51□□□□□ -1.37
TRIM4Q9C037 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC6.51□□□□□ -1.37
TRIM4Q9C037 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC6.51□□□□□ -1.37
TRIM4Q9C037 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
TRIM4Q9C037 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
TRIM4Q9C037 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
TRIM4Q9C037 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
TRIM4Q9C037 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC6.5□□□□□ -1.37
TRIM4Q9C037 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
TRIM4Q9C037 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
TRIM4Q9C037 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
TRIM4Q9C037 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
TRIM4Q9C037 AC011369.2-201ENST00000624423 1567 ntBASIC6.5□□□□□ -1.37
TRIM4Q9C037 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC6.5□□□□□ -1.37
TRIM4Q9C037 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
TRIM4Q9C037 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
TRIM4Q9C037 SNORA51.1-201ENST00000363243 140 ntBASIC6.5□□□□□ -1.37
TRIM4Q9C037 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC6.5□□□□□ -1.37
TRIM4Q9C037 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC6.5□□□□□ -1.37
TRIM4Q9C037 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC6.5□□□□□ -1.37
TRIM4Q9C037 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC6.5□□□□□ -1.37
TRIM4Q9C037 AC006333.1-204ENST00000429396 648 ntTSL 3 BASIC6.5□□□□□ -1.37
TRIM4Q9C037 RPS29P14-201ENST00000431518 171 ntBASIC6.5□□□□□ -1.37
TRIM4Q9C037 AC007383.1-201ENST00000445875 636 ntBASIC6.5□□□□□ -1.37
TRIM4Q9C037 LINC01832-201ENST00000446520 553 ntTSL 4 BASIC6.5□□□□□ -1.37
TRIM4Q9C037 AC074386.1-201ENST00000476560 767 ntBASIC6.5□□□□□ -1.37
TRIM4Q9C037 AC021220.1-201ENST00000507445 630 ntBASIC6.5□□□□□ -1.37
TRIM4Q9C037 RN7SKP11-201ENST00000517018 287 ntBASIC6.5□□□□□ -1.37
TRIM4Q9C037 AC100854.1-201ENST00000520351 341 ntBASIC6.5□□□□□ -1.37
TRIM4Q9C037 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC6.5□□□□□ -1.37
TRIM4Q9C037 OR5D2P-201ENST00000524390 911 ntBASIC6.5□□□□□ -1.37
TRIM4Q9C037 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC6.5□□□□□ -1.37
TRIM4Q9C037 RN7SL230P-201ENST00000580835 303 ntBASIC6.5□□□□□ -1.37
TRIM4Q9C037 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC6.5□□□□□ -1.37
TRIM4Q9C037 AC011824.1-201ENST00000584863 561 ntTSL 4 BASIC6.5□□□□□ -1.37
TRIM4Q9C037 LSM1P2-201ENST00000604911 322 ntBASIC6.5□□□□□ -1.37
TRIM4Q9C037 RPL12P48-201ENST00000605620 304 ntBASIC6.5□□□□□ -1.37
TRIM4Q9C037 AL137246.2-201ENST00000613439 662 ntBASIC6.5□□□□□ -1.37
TRIM4Q9C037 MIR6721-201ENST00000617181 87 ntBASIC6.5□□□□□ -1.37
TRIM4Q9C037 PPP3CB-AS1-215ENST00000620559 656 ntTSL 5 BASIC6.5□□□□□ -1.37
TRIM4Q9C037 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC6.5□□□□□ -1.37
TRIM4Q9C037 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
TRIM4Q9C037 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
TRIM4Q9C037 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
TRIM4Q9C037 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC6.5□□□□□ -1.37
TRIM4Q9C037 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC6.5□□□□□ -1.37
TRIM4Q9C037 AC093278.2-201ENST00000564956 2485 ntBASIC6.5□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms