Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 RNA5SP478-201ENST00000364657 115 ntBASIC5.97□□□□□ -1.45
COL21A1Q96P44 MRPS21P5-201ENST00000417885 231 ntBASIC5.97□□□□□ -1.45
COL21A1Q96P44 AL356481.1-202ENST00000426704 970 ntTSL 2 BASIC5.97□□□□□ -1.45
COL21A1Q96P44 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC5.97□□□□□ -1.45
COL21A1Q96P44 BX679664.2-201ENST00000439282 283 ntBASIC5.97□□□□□ -1.45
COL21A1Q96P44 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC5.97□□□□□ -1.45
COL21A1Q96P44 RPL12P49-201ENST00000441100 121 ntBASIC5.97□□□□□ -1.45
COL21A1Q96P44 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC5.97□□□□□ -1.45
COL21A1Q96P44 AC092601.1-201ENST00000444526 383 ntBASIC5.97□□□□□ -1.45
COL21A1Q96P44 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC5.97□□□□□ -1.45
COL21A1Q96P44 AC073476.1-201ENST00000452854 407 ntBASIC5.97□□□□□ -1.45
COL21A1Q96P44 AC002075.1-201ENST00000457396 676 ntBASIC5.97□□□□□ -1.45
COL21A1Q96P44 RBMY2HP-201ENST00000457961 720 ntBASIC5.97□□□□□ -1.45
COL21A1Q96P44 AC004890.1-201ENST00000461005 181 ntBASIC5.97□□□□□ -1.45
COL21A1Q96P44 SLC25A51P1-201ENST00000468432 871 ntBASIC5.97□□□□□ -1.45
COL21A1Q96P44 AC068721.1-201ENST00000507156 583 ntTSL 5 BASIC5.97□□□□□ -1.45
COL21A1Q96P44 NACAP5-201ENST00000509863 636 ntBASIC5.97□□□□□ -1.45
COL21A1Q96P44 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC5.97□□□□□ -1.45
COL21A1Q96P44 AC138517.1-201ENST00000515724 568 ntBASIC5.97□□□□□ -1.45
COL21A1Q96P44 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC5.97□□□□□ -1.45
COL21A1Q96P44 NEDD8-203ENST00000524927 653 ntTSL 2 BASIC5.97□□□□□ -1.45
COL21A1Q96P44 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC5.97□□□□□ -1.45
COL21A1Q96P44 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC5.97□□□□□ -1.45
COL21A1Q96P44 HNRNPCP1-201ENST00000556181 766 ntBASIC5.97□□□□□ -1.45
COL21A1Q96P44 AC023968.1-201ENST00000560719 475 ntBASIC5.97□□□□□ -1.45
COL21A1Q96P44 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC5.97□□□□□ -1.45
COL21A1Q96P44 AC025283.1-201ENST00000572039 734 ntBASIC5.97□□□□□ -1.45
COL21A1Q96P44 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC5.97□□□□□ -1.45
COL21A1Q96P44 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC5.97□□□□□ -1.45
COL21A1Q96P44 GAPDHP41-201ENST00000613707 975 ntBASIC5.97□□□□□ -1.45
COL21A1Q96P44 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC5.97□□□□□ -1.45
COL21A1Q96P44 BIN2P1-201ENST00000504996 1530 ntBASIC5.97□□□□□ -1.45
COL21A1Q96P44 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC5.97□□□□□ -1.45
COL21A1Q96P44 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
COL21A1Q96P44 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
COL21A1Q96P44 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
COL21A1Q96P44 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC5.97□□□□□ -1.45
COL21A1Q96P44 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
COL21A1Q96P44 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.97□□□□□ -1.45
COL21A1Q96P44 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
COL21A1Q96P44 SAMMSON-210ENST00000641260 1308 ntBASIC5.97□□□□□ -1.45
COL21A1Q96P44 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
COL21A1Q96P44 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
COL21A1Q96P44 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
COL21A1Q96P44 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
COL21A1Q96P44 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC5.96□□□□□ -1.45
COL21A1Q96P44 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
COL21A1Q96P44 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
COL21A1Q96P44 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
COL21A1Q96P44 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
COL21A1Q96P44 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
COL21A1Q96P44 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
COL21A1Q96P44 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
COL21A1Q96P44 TINAG-202ENST00000370864 692 ntTSL 2 BASIC5.96□□□□□ -1.46
COL21A1Q96P44 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC5.96□□□□□ -1.46
COL21A1Q96P44 RPS26P38-201ENST00000414476 348 ntBASIC5.96□□□□□ -1.46
COL21A1Q96P44 UBE2V1P14-201ENST00000415815 558 ntBASIC5.96□□□□□ -1.46
COL21A1Q96P44 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC5.96□□□□□ -1.46
COL21A1Q96P44 AC083862.1-201ENST00000427378 1242 ntBASIC5.96□□□□□ -1.46
COL21A1Q96P44 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
COL21A1Q96P44 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC5.96□□□□□ -1.46
COL21A1Q96P44 AC245291.3-201ENST00000443400 292 ntBASIC5.96□□□□□ -1.46
COL21A1Q96P44 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC5.96□□□□□ -1.46
COL21A1Q96P44 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC5.96□□□□□ -1.46
COL21A1Q96P44 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC5.96□□□□□ -1.46
COL21A1Q96P44 AC106800.3-201ENST00000511389 308 ntBASIC5.96□□□□□ -1.46
COL21A1Q96P44 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC5.96□□□□□ -1.46
COL21A1Q96P44 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC5.96□□□□□ -1.46
COL21A1Q96P44 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC5.96□□□□□ -1.46
COL21A1Q96P44 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC5.96□□□□□ -1.46
COL21A1Q96P44 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC5.96□□□□□ -1.46
COL21A1Q96P44 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC5.96□□□□□ -1.46
COL21A1Q96P44 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
COL21A1Q96P44 ARGFXP2-201ENST00000579304 949 ntBASIC5.96□□□□□ -1.46
COL21A1Q96P44 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC5.96□□□□□ -1.46
COL21A1Q96P44 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC5.96□□□□□ -1.46
COL21A1Q96P44 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC5.96□□□□□ -1.46
COL21A1Q96P44 AL445649.1-201ENST00000615941 691 ntBASIC5.96□□□□□ -1.46
COL21A1Q96P44 HTR1DP1-201ENST00000616500 888 ntBASIC5.96□□□□□ -1.46
COL21A1Q96P44 AC244100.4-201ENST00000617747 388 ntBASIC5.96□□□□□ -1.46
COL21A1Q96P44 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
COL21A1Q96P44 MIR6813-201ENST00000621638 56 ntBASIC5.96□□□□□ -1.46
COL21A1Q96P44 LINC02495-203ENST00000636704 242 ntBASIC5.96□□□□□ -1.46
COL21A1Q96P44 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
COL21A1Q96P44 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
COL21A1Q96P44 GDA-209ENST00000545168 5362 ntTSL 2 BASIC5.96□□□□□ -1.46
COL21A1Q96P44 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
COL21A1Q96P44 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.96□□□□□ -1.46
COL21A1Q96P44 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC5.96□□□□□ -1.46
COL21A1Q96P44 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
COL21A1Q96P44 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC5.96□□□□□ -1.46
COL21A1Q96P44 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
COL21A1Q96P44 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
COL21A1Q96P44 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC5.95□□□□□ -1.46
COL21A1Q96P44 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.95□□□□□ -1.46
COL21A1Q96P44 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
COL21A1Q96P44 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
COL21A1Q96P44 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC5.95□□□□□ -1.46
COL21A1Q96P44 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC5.95□□□□□ -1.46
COL21A1Q96P44 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms