Protein–RNA interactions for Protein: Q96F63

CCDC97, Coiled-coil domain-containing protein 97, humanhuman

Predicted RBP Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC97Q96F63 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC8.16□□□□□ -1.1
CCDC97Q96F63 RPL21P110-201ENST00000433345 446 ntBASIC8.16□□□□□ -1.1
CCDC97Q96F63 NDUFB3-202ENST00000433898 503 ntAPPRIS P1 TSL 2 BASIC8.16□□□□□ -1.1
CCDC97Q96F63 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC8.16□□□□□ -1.1
CCDC97Q96F63 CPSF6-202ENST00000435070 6616 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
CCDC97Q96F63 CYCSP11-201ENST00000436426 315 ntBASIC8.16□□□□□ -1.1
CCDC97Q96F63 GHRL-207ENST00000437422 443 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
CCDC97Q96F63 LINC01747-201ENST00000437696 1067 ntTSL 2 BASIC8.16□□□□□ -1.1
CCDC97Q96F63 MTND4P6-201ENST00000438297 472 ntBASIC8.16□□□□□ -1.1
CCDC97Q96F63 OR52J1P-201ENST00000450596 932 ntBASIC8.16□□□□□ -1.1
CCDC97Q96F63 SUN3-208ENST00000453192 801 ntTSL 5 BASIC8.16□□□□□ -1.1
CCDC97Q96F63 CCDC75P1-201ENST00000469247 791 ntBASIC8.16□□□□□ -1.1
CCDC97Q96F63 Z99496.1-201ENST00000469424 1477 ntBASIC8.16□□□□□ -1.1
CCDC97Q96F63 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC8.16□□□□□ -1.1
CCDC97Q96F63 HSD17B11-203ENST00000507286 851 ntTSL 5 BASIC8.16□□□□□ -1.1
CCDC97Q96F63 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC8.16□□□□□ -1.1
CCDC97Q96F63 AC114812.3-201ENST00000509542 730 ntBASIC8.16□□□□□ -1.1
CCDC97Q96F63 NDUFA5P2-201ENST00000519723 344 ntBASIC8.16□□□□□ -1.1
CCDC97Q96F63 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC8.16□□□□□ -1.1
CCDC97Q96F63 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
CCDC97Q96F63 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC8.16□□□□□ -1.1
CCDC97Q96F63 AC090707.1-201ENST00000528795 396 ntTSL 2 BASIC8.16□□□□□ -1.1
CCDC97Q96F63 SLC24A1-212ENST00000546330 3246 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
CCDC97Q96F63 NPIPB9-202ENST00000550983 2123 ntAPPRIS P2 TSL 1 (best) BASIC8.16□□□□□ -1.1
CCDC97Q96F63 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC8.16□□□□□ -1.1
CCDC97Q96F63 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC8.16□□□□□ -1.1
CCDC97Q96F63 PSEN1-223ENST00000557511 1230 ntTSL 5 BASIC8.16□□□□□ -1.1
CCDC97Q96F63 AC027808.2-203ENST00000558261 638 ntTSL 5 BASIC8.16□□□□□ -1.1
CCDC97Q96F63 MIR4262-201ENST00000578394 54 ntBASIC8.16□□□□□ -1.1
CCDC97Q96F63 OR4K7P-201ENST00000580232 945 ntBASIC8.16□□□□□ -1.1
CCDC97Q96F63 AC087393.2-201ENST00000580962 504 ntTSL 3 BASIC8.16□□□□□ -1.1
CCDC97Q96F63 AC109315.1-201ENST00000584143 1347 ntBASIC8.16□□□□□ -1.1
CCDC97Q96F63 AC103881.1-201ENST00000603476 538 ntBASIC8.16□□□□□ -1.1
CCDC97Q96F63 AP000254.1-201ENST00000609934 520 ntBASIC8.16□□□□□ -1.1
CCDC97Q96F63 AC104073.3-201ENST00000610942 955 ntBASIC8.16□□□□□ -1.1
CCDC97Q96F63 RN7SL113P-201ENST00000619959 299 ntBASIC8.16□□□□□ -1.1
CCDC97Q96F63 AC008443.7-201ENST00000622195 246 ntBASIC8.16□□□□□ -1.1
CCDC97Q96F63 TMEM99-204ENST00000622451 2073 ntAPPRIS P2 TSL 2 BASIC8.16□□□□□ -1.1
CCDC97Q96F63 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
CCDC97Q96F63 C10orf67-204ENST00000636213 3981 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
CCDC97Q96F63 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC8.16□□□□□ -1.1
CCDC97Q96F63 B4GALT4-207ENST00000467604 5794 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
CCDC97Q96F63 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
CCDC97Q96F63 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC8.16□□□□□ -1.1
CCDC97Q96F63 HERC4-202ENST00000373700 3905 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
CCDC97Q96F63 KIDINS220-202ENST00000319688 3765 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
CCDC97Q96F63 GLI1-201ENST00000228682 3613 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
CCDC97Q96F63 TCAM1P-205ENST00000478379 3317 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
CCDC97Q96F63 ARMC3-202ENST00000376528 3258 ntTSL 2 BASIC8.16□□□□□ -1.1
CCDC97Q96F63 DNA2-203ENST00000399180 3207 ntTSL 2 BASIC8.16□□□□□ -1.1
CCDC97Q96F63 GTF2H1-201ENST00000265963 2982 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
CCDC97Q96F63 LDAH-201ENST00000237822 2907 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
CCDC97Q96F63 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
CCDC97Q96F63 CKAP2L-201ENST00000302450 4533 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
CCDC97Q96F63 FGD4-202ENST00000427716 8242 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.1
CCDC97Q96F63 CDK1-203ENST00000395284 1913 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.1
CCDC97Q96F63 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
CCDC97Q96F63 NCALD-201ENST00000220931 3283 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
CCDC97Q96F63 SAR1A-202ENST00000373238 3227 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.1
CCDC97Q96F63 ZNF814-201ENST00000435989 3146 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.1
CCDC97Q96F63 SORCS1-202ENST00000344440 3009 ntTSL 5 BASIC8.15□□□□□ -1.1
CCDC97Q96F63 ZNF833P-201ENST00000424938 1494 ntBASIC8.15□□□□□ -1.1
CCDC97Q96F63 SPANXN2-201ENST00000598475 1378 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
CCDC97Q96F63 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
CCDC97Q96F63 PRAC1-201ENST00000290294 386 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
CCDC97Q96F63 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
CCDC97Q96F63 OR2G2-201ENST00000320065 954 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
CCDC97Q96F63 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.1
CCDC97Q96F63 BCL2L15-202ENST00000393316 1084 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
CCDC97Q96F63 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.1
CCDC97Q96F63 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
CCDC97Q96F63 MTCO3P41-201ENST00000414801 328 ntBASIC8.15□□□□□ -1.1
CCDC97Q96F63 AC019050.1-201ENST00000418508 492 ntBASIC8.15□□□□□ -1.1
CCDC97Q96F63 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC8.15□□□□□ -1.1
CCDC97Q96F63 ZEB2-AS1-201ENST00000421083 453 ntTSL 2 BASIC8.15□□□□□ -1.1
CCDC97Q96F63 SLIT1-AS1-201ENST00000424428 689 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
CCDC97Q96F63 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
CCDC97Q96F63 AL590729.1-201ENST00000427046 573 ntTSL 2 BASIC8.15□□□□□ -1.1
CCDC97Q96F63 AC099066.1-201ENST00000428148 534 ntTSL 5 BASIC8.15□□□□□ -1.1
CCDC97Q96F63 AL645936.2-201ENST00000430565 928 ntBASIC8.15□□□□□ -1.1
CCDC97Q96F63 AC005083.1-202ENST00000430859 740 ntTSL 2 BASIC8.15□□□□□ -1.1
CCDC97Q96F63 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC8.15□□□□□ -1.1
CCDC97Q96F63 SEPT7P5-201ENST00000434048 306 ntBASIC8.15□□□□□ -1.1
CCDC97Q96F63 AL590103.1-201ENST00000434488 307 ntBASIC8.15□□□□□ -1.1
CCDC97Q96F63 RPL21P88-201ENST00000436649 436 ntBASIC8.15□□□□□ -1.1
CCDC97Q96F63 AC093155.1-201ENST00000440164 826 ntBASIC8.15□□□□□ -1.1
CCDC97Q96F63 AC005840.2-201ENST00000447193 355 ntBASIC8.15□□□□□ -1.1
CCDC97Q96F63 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC8.15□□□□□ -1.1
CCDC97Q96F63 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC8.15□□□□□ -1.1
CCDC97Q96F63 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC8.15□□□□□ -1.1
CCDC97Q96F63 AL133351.3-201ENST00000454998 193 ntBASIC8.15□□□□□ -1.1
CCDC97Q96F63 PNPLA4P1-201ENST00000458328 305 ntBASIC8.15□□□□□ -1.1
CCDC97Q96F63 MTND1P16-201ENST00000465177 898 ntBASIC8.15□□□□□ -1.1
CCDC97Q96F63 OR9A3P-202ENST00000485185 878 ntBASIC8.15□□□□□ -1.1
CCDC97Q96F63 AC068724.1-201ENST00000487100 792 ntBASIC8.15□□□□□ -1.1
CCDC97Q96F63 RN7SL314P-201ENST00000490735 292 ntBASIC8.15□□□□□ -1.1
CCDC97Q96F63 LEMD1-208ENST00000495594 637 ntTSL 3 BASIC8.15□□□□□ -1.1
CCDC97Q96F63 AC027607.1-201ENST00000503034 534 ntTSL 3 BASIC8.15□□□□□ -1.1
CCDC97Q96F63 AC112198.1-201ENST00000505369 1220 ntBASIC8.15□□□□□ -1.1
CCDC97Q96F63 LECT2-203ENST00000512872 762 ntTSL 5 BASIC8.15□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms