Protein–RNA interactions for Protein: Q7RTU4

BHLHA9, Class A basic helix-loop-helix protein 9, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHA9Q7RTU4 CXADRP1-201ENST00000398098 1095 ntBASIC6.48□□□□□ -1.37
BHLHA9Q7RTU4 OR51A6P-201ENST00000418680 1004 ntBASIC6.48□□□□□ -1.37
BHLHA9Q7RTU4 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC6.48□□□□□ -1.37
BHLHA9Q7RTU4 AL355355.1-201ENST00000442900 793 ntBASIC6.48□□□□□ -1.37
BHLHA9Q7RTU4 AC097463.1-201ENST00000447288 481 ntBASIC6.48□□□□□ -1.37
BHLHA9Q7RTU4 OR52I1-201ENST00000450052 1050 ntBASIC6.48□□□□□ -1.37
BHLHA9Q7RTU4 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC6.48□□□□□ -1.37
BHLHA9Q7RTU4 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC6.48□□□□□ -1.37
BHLHA9Q7RTU4 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC6.48□□□□□ -1.37
BHLHA9Q7RTU4 AP002884.1-201ENST00000479691 655 ntBASIC6.48□□□□□ -1.37
BHLHA9Q7RTU4 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC6.48□□□□□ -1.37
BHLHA9Q7RTU4 AC090958.1-201ENST00000511122 351 ntBASIC6.48□□□□□ -1.37
BHLHA9Q7RTU4 AC108103.1-201ENST00000511286 446 ntBASIC6.48□□□□□ -1.37
BHLHA9Q7RTU4 AC097103.2-205ENST00000515247 567 ntTSL 4 BASIC6.48□□□□□ -1.37
BHLHA9Q7RTU4 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC6.48□□□□□ -1.37
BHLHA9Q7RTU4 AC011853.1-201ENST00000518911 454 ntBASIC6.48□□□□□ -1.37
BHLHA9Q7RTU4 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC6.48□□□□□ -1.37
BHLHA9Q7RTU4 RNU4ATAC-201ENST00000580972 127 ntBASIC6.48□□□□□ -1.37
BHLHA9Q7RTU4 MIR4271-201ENST00000582451 67 ntBASIC6.48□□□□□ -1.37
BHLHA9Q7RTU4 AL021368.3-201ENST00000607119 578 ntBASIC6.48□□□□□ -1.37
BHLHA9Q7RTU4 AC097641.3-201ENST00000613523 464 ntBASIC6.48□□□□□ -1.37
BHLHA9Q7RTU4 CXADRP3-202ENST00000617265 1100 ntBASIC6.48□□□□□ -1.37
BHLHA9Q7RTU4 AL512652.1-201ENST00000619006 500 ntBASIC6.48□□□□□ -1.37
BHLHA9Q7RTU4 AC138907.10-201ENST00000623708 983 ntBASIC6.48□□□□□ -1.37
BHLHA9Q7RTU4 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC6.48□□□□□ -1.37
BHLHA9Q7RTU4 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
BHLHA9Q7RTU4 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC6.48□□□□□ -1.37
BHLHA9Q7RTU4 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
BHLHA9Q7RTU4 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
BHLHA9Q7RTU4 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
BHLHA9Q7RTU4 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
BHLHA9Q7RTU4 AC024651.2-201ENST00000562480 2098 ntBASIC6.48□□□□□ -1.37
BHLHA9Q7RTU4 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
BHLHA9Q7RTU4 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
BHLHA9Q7RTU4 ZNF840P-201ENST00000504759 1996 ntBASIC6.48□□□□□ -1.37
BHLHA9Q7RTU4 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
BHLHA9Q7RTU4 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC6.47□□□□□ -1.37
BHLHA9Q7RTU4 AC104966.1-201ENST00000467010 1464 ntBASIC6.47□□□□□ -1.37
BHLHA9Q7RTU4 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
BHLHA9Q7RTU4 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC6.47□□□□□ -1.37
BHLHA9Q7RTU4 PRKCA-202ENST00000413366 8751 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
BHLHA9Q7RTU4 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
BHLHA9Q7RTU4 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
BHLHA9Q7RTU4 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
BHLHA9Q7RTU4 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC6.47□□□□□ -1.37
BHLHA9Q7RTU4 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC6.47□□□□□ -1.37
BHLHA9Q7RTU4 LMO7-203ENST00000357063 8237 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
BHLHA9Q7RTU4 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
BHLHA9Q7RTU4 AC022325.1-201ENST00000502748 2199 ntBASIC6.47□□□□□ -1.37
BHLHA9Q7RTU4 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
BHLHA9Q7RTU4 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
BHLHA9Q7RTU4 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC6.47□□□□□ -1.37
BHLHA9Q7RTU4 AC096921.2-201ENST00000561507 1916 ntBASIC6.47□□□□□ -1.37
BHLHA9Q7RTU4 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
BHLHA9Q7RTU4 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC6.47□□□□□ -1.37
BHLHA9Q7RTU4 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC6.47□□□□□ -1.37
BHLHA9Q7RTU4 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC6.47□□□□□ -1.37
BHLHA9Q7RTU4 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC6.47□□□□□ -1.37
BHLHA9Q7RTU4 PSMD10P2-201ENST00000432890 672 ntBASIC6.47□□□□□ -1.37
BHLHA9Q7RTU4 OR3D1P-201ENST00000438288 955 ntBASIC6.47□□□□□ -1.37
BHLHA9Q7RTU4 AC073594.1-201ENST00000462065 364 ntBASIC6.47□□□□□ -1.37
BHLHA9Q7RTU4 AC023818.1-201ENST00000498379 384 ntBASIC6.47□□□□□ -1.37
BHLHA9Q7RTU4 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC6.47□□□□□ -1.37
BHLHA9Q7RTU4 CR383658.1-201ENST00000514609 734 ntBASIC6.47□□□□□ -1.37
BHLHA9Q7RTU4 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC6.47□□□□□ -1.37
BHLHA9Q7RTU4 AC021269.1-201ENST00000526860 705 ntBASIC6.47□□□□□ -1.37
BHLHA9Q7RTU4 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC6.47□□□□□ -1.37
BHLHA9Q7RTU4 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC6.47□□□□□ -1.37
BHLHA9Q7RTU4 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC6.47□□□□□ -1.37
BHLHA9Q7RTU4 MTND1P8-201ENST00000571424 950 ntBASIC6.47□□□□□ -1.37
BHLHA9Q7RTU4 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
BHLHA9Q7RTU4 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC6.47□□□□□ -1.37
BHLHA9Q7RTU4 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC6.47□□□□□ -1.37
BHLHA9Q7RTU4 AC073592.6-201ENST00000624271 415 ntBASIC6.47□□□□□ -1.37
BHLHA9Q7RTU4 AP000720.1-201ENST00000625091 483 ntBASIC6.47□□□□□ -1.37
BHLHA9Q7RTU4 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC6.47□□□□□ -1.37
BHLHA9Q7RTU4 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
BHLHA9Q7RTU4 IFIT1P1-201ENST00000400497 1449 ntBASIC6.47□□□□□ -1.37
BHLHA9Q7RTU4 CACNA1D-224ENST00000637424 6856 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
BHLHA9Q7RTU4 KLF7-201ENST00000309446 8362 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
BHLHA9Q7RTU4 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC6.47□□□□□ -1.37
BHLHA9Q7RTU4 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
BHLHA9Q7RTU4 AOX3P-204ENST00000491025 2107 ntBASIC6.47□□□□□ -1.37
BHLHA9Q7RTU4 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
BHLHA9Q7RTU4 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC6.47□□□□□ -1.37
BHLHA9Q7RTU4 LRRC37A16P-202ENST00000586022 3725 ntBASIC6.47□□□□□ -1.37
BHLHA9Q7RTU4 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
BHLHA9Q7RTU4 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC6.47□□□□□ -1.37
BHLHA9Q7RTU4 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
BHLHA9Q7RTU4 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.37
BHLHA9Q7RTU4 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
BHLHA9Q7RTU4 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.37
BHLHA9Q7RTU4 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.37
BHLHA9Q7RTU4 AL592430.1-202ENST00000414383 1546 ntTSL 3 BASIC6.46□□□□□ -1.37
BHLHA9Q7RTU4 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC6.46□□□□□ -1.37
BHLHA9Q7RTU4 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC6.46□□□□□ -1.37
BHLHA9Q7RTU4 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
BHLHA9Q7RTU4 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
BHLHA9Q7RTU4 SETDB1-205ENST00000368969 4370 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
BHLHA9Q7RTU4 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms