Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 AC009948.1-203ENST00000450044 793 ntTSL 3 BASIC6.11□□□□□ -1.43
PTCHD4Q6ZW05 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC6.11□□□□□ -1.43
PTCHD4Q6ZW05 CLIC4P1-201ENST00000453177 535 ntBASIC6.11□□□□□ -1.43
PTCHD4Q6ZW05 AC108729.2-201ENST00000476543 840 ntBASIC6.11□□□□□ -1.43
PTCHD4Q6ZW05 AC090543.1-201ENST00000492168 485 ntBASIC6.11□□□□□ -1.43
PTCHD4Q6ZW05 AC113383.1-205ENST00000502253 792 ntTSL 2 BASIC6.11□□□□□ -1.43
PTCHD4Q6ZW05 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC6.11□□□□□ -1.43
PTCHD4Q6ZW05 MTCO2P9-201ENST00000503214 694 ntBASIC6.11□□□□□ -1.43
PTCHD4Q6ZW05 PCNAP1-201ENST00000505363 709 ntBASIC6.11□□□□□ -1.43
PTCHD4Q6ZW05 CC2D2A-207ENST00000507954 548 ntAPPRIS ALT2 TSL 2 BASIC6.11□□□□□ -1.43
PTCHD4Q6ZW05 AC034244.2-201ENST00000514668 858 ntBASIC6.11□□□□□ -1.43
PTCHD4Q6ZW05 RNU6-491P-201ENST00000516099 110 ntBASIC6.11□□□□□ -1.43
PTCHD4Q6ZW05 SCARNA18.2-201ENST00000516882 84 ntBASIC6.11□□□□□ -1.43
PTCHD4Q6ZW05 RN7SKP11-201ENST00000517018 287 ntBASIC6.11□□□□□ -1.43
PTCHD4Q6ZW05 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC6.11□□□□□ -1.43
PTCHD4Q6ZW05 IGKV2-4-201ENST00000523070 340 ntBASIC6.11□□□□□ -1.43
PTCHD4Q6ZW05 AC022639.1-202ENST00000524360 581 ntTSL 4 BASIC6.11□□□□□ -1.43
PTCHD4Q6ZW05 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC6.11□□□□□ -1.43
PTCHD4Q6ZW05 NDUFA3P2-201ENST00000531434 232 ntBASIC6.11□□□□□ -1.43
PTCHD4Q6ZW05 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC6.11□□□□□ -1.43
PTCHD4Q6ZW05 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC6.11□□□□□ -1.43
PTCHD4Q6ZW05 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC6.11□□□□□ -1.43
PTCHD4Q6ZW05 AC013356.3-201ENST00000558601 584 ntTSL 3 BASIC6.11□□□□□ -1.43
PTCHD4Q6ZW05 AL132640.2-202ENST00000559732 614 ntBASIC6.11□□□□□ -1.43
PTCHD4Q6ZW05 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC6.11□□□□□ -1.43
PTCHD4Q6ZW05 AC087292.1-201ENST00000573371 512 ntTSL 5 BASIC6.11□□□□□ -1.43
PTCHD4Q6ZW05 AL352984.2-201ENST00000611153 546 ntBASIC6.11□□□□□ -1.43
PTCHD4Q6ZW05 AL161931.1-201ENST00000612768 246 ntBASIC6.11□□□□□ -1.43
PTCHD4Q6ZW05 pRNA.9-201ENST00000618609 89 ntBASIC6.11□□□□□ -1.43
PTCHD4Q6ZW05 AP003499.2-201ENST00000624100 483 ntBASIC6.11□□□□□ -1.43
PTCHD4Q6ZW05 AL356118.1-201ENST00000635272 1078 ntBASIC6.11□□□□□ -1.43
PTCHD4Q6ZW05 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
PTCHD4Q6ZW05 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
PTCHD4Q6ZW05 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
PTCHD4Q6ZW05 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
PTCHD4Q6ZW05 AC073365.1-203ENST00000641055 1992 ntBASIC6.11□□□□□ -1.43
PTCHD4Q6ZW05 AC005332.9-201ENST00000620266 2921 ntBASIC6.11□□□□□ -1.43
PTCHD4Q6ZW05 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC6.11□□□□□ -1.43
PTCHD4Q6ZW05 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
PTCHD4Q6ZW05 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
PTCHD4Q6ZW05 RPS6KA6-201ENST00000262752 2547 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
PTCHD4Q6ZW05 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
PTCHD4Q6ZW05 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
PTCHD4Q6ZW05 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PTCHD4Q6ZW05 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
PTCHD4Q6ZW05 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
PTCHD4Q6ZW05 ATG12-202ENST00000500945 1430 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PTCHD4Q6ZW05 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC6.1□□□□□ -1.43
PTCHD4Q6ZW05 AL359263.1-201ENST00000441188 2796 ntBASIC6.1□□□□□ -1.43
PTCHD4Q6ZW05 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PTCHD4Q6ZW05 SSX7-201ENST00000298181 1311 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
PTCHD4Q6ZW05 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC6.1□□□□□ -1.43
PTCHD4Q6ZW05 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PTCHD4Q6ZW05 REG1A-201ENST00000233735 808 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
PTCHD4Q6ZW05 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
PTCHD4Q6ZW05 RNA5SP114-201ENST00000363780 113 ntBASIC6.1□□□□□ -1.43
PTCHD4Q6ZW05 MIR421-201ENST00000365696 85 ntBASIC6.1□□□□□ -1.43
PTCHD4Q6ZW05 RNA5SP53-201ENST00000391299 120 ntBASIC6.1□□□□□ -1.43
PTCHD4Q6ZW05 TP63-205ENST00000392461 1251 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PTCHD4Q6ZW05 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC6.1□□□□□ -1.43
PTCHD4Q6ZW05 AL157932.1-201ENST00000413246 363 ntTSL 3 BASIC6.1□□□□□ -1.43
PTCHD4Q6ZW05 AL359885.1-201ENST00000415786 903 ntBASIC6.1□□□□□ -1.43
PTCHD4Q6ZW05 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC6.1□□□□□ -1.43
PTCHD4Q6ZW05 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC6.1□□□□□ -1.43
PTCHD4Q6ZW05 MTND4P24-201ENST00000424002 397 ntBASIC6.1□□□□□ -1.43
PTCHD4Q6ZW05 RNF19BPX-201ENST00000426224 625 ntBASIC6.1□□□□□ -1.43
PTCHD4Q6ZW05 AP001628.1-201ENST00000431150 285 ntTSL 5 BASIC6.1□□□□□ -1.43
PTCHD4Q6ZW05 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC6.1□□□□□ -1.43
PTCHD4Q6ZW05 ELOCP3-201ENST00000439303 348 ntBASIC6.1□□□□□ -1.43
PTCHD4Q6ZW05 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC6.1□□□□□ -1.43
PTCHD4Q6ZW05 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC6.1□□□□□ -1.43
PTCHD4Q6ZW05 DPP10-AS1-202ENST00000448663 644 ntTSL 3 BASIC6.1□□□□□ -1.43
PTCHD4Q6ZW05 AL392046.1-201ENST00000450742 569 ntTSL 5 BASIC6.1□□□□□ -1.43
PTCHD4Q6ZW05 LINC01795-201ENST00000454367 813 ntTSL 3 BASIC6.1□□□□□ -1.43
PTCHD4Q6ZW05 AL391863.1-202ENST00000457427 612 ntTSL 5 BASIC6.1□□□□□ -1.43
PTCHD4Q6ZW05 AC092824.1-201ENST00000483524 576 ntBASIC6.1□□□□□ -1.43
PTCHD4Q6ZW05 LINC01184-206ENST00000508878 968 ntTSL 5 BASIC6.1□□□□□ -1.43
PTCHD4Q6ZW05 AC083906.1-201ENST00000509298 406 ntBASIC6.1□□□□□ -1.43
PTCHD4Q6ZW05 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC6.1□□□□□ -1.43
PTCHD4Q6ZW05 NPM1P52-201ENST00000518264 846 ntBASIC6.1□□□□□ -1.43
PTCHD4Q6ZW05 SEC11B-201ENST00000518383 499 ntBASIC6.1□□□□□ -1.43
PTCHD4Q6ZW05 SUMO2P19-201ENST00000518920 295 ntBASIC6.1□□□□□ -1.43
PTCHD4Q6ZW05 OR4C1P-201ENST00000530880 937 ntBASIC6.1□□□□□ -1.43
PTCHD4Q6ZW05 ELK3-206ENST00000552142 1242 ntTSL 5 BASIC6.1□□□□□ -1.43
PTCHD4Q6ZW05 AL121594.4-201ENST00000556211 1196 ntBASIC6.1□□□□□ -1.43
PTCHD4Q6ZW05 AC022898.1-202ENST00000560864 806 ntTSL 2 BASIC6.1□□□□□ -1.43
PTCHD4Q6ZW05 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC6.1□□□□□ -1.43
PTCHD4Q6ZW05 AC009712.1-201ENST00000564938 316 ntBASIC6.1□□□□□ -1.43
PTCHD4Q6ZW05 AC008551.1-201ENST00000575612 405 ntTSL 5 BASIC6.1□□□□□ -1.43
PTCHD4Q6ZW05 AC024614.1-201ENST00000577546 307 ntBASIC6.1□□□□□ -1.43
PTCHD4Q6ZW05 AC110603.1-201ENST00000580645 468 ntTSL 3 BASIC6.1□□□□□ -1.43
PTCHD4Q6ZW05 AC011447.2-201ENST00000592921 283 ntBASIC6.1□□□□□ -1.43
PTCHD4Q6ZW05 ZNF92P2-201ENST00000600543 1059 ntBASIC6.1□□□□□ -1.43
PTCHD4Q6ZW05 AC073539.3-201ENST00000601905 386 ntTSL 3 BASIC6.1□□□□□ -1.43
PTCHD4Q6ZW05 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC6.1□□□□□ -1.43
PTCHD4Q6ZW05 COX6CP16-201ENST00000603667 216 ntBASIC6.1□□□□□ -1.43
PTCHD4Q6ZW05 AC034236.3-201ENST00000605999 461 ntBASIC6.1□□□□□ -1.43
PTCHD4Q6ZW05 AMYH02020865.1-207ENST00000617096 458 ntTSL 3 BASIC6.1□□□□□ -1.43
PTCHD4Q6ZW05 AC097460.3-201ENST00000623099 442 ntBASIC6.1□□□□□ -1.43
PTCHD4Q6ZW05 AP000770.2-201ENST00000623694 100 ntBASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms