Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 AC140063.1-201ENST00000541343 259 ntBASIC5.9□□□□□ -1.46
TMEM53Q6P2H8 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC5.9□□□□□ -1.46
TMEM53Q6P2H8 AC023161.1-201ENST00000549532 420 ntTSL 3 BASIC5.9□□□□□ -1.46
TMEM53Q6P2H8 AC004232.1-201ENST00000571388 208 ntBASIC5.9□□□□□ -1.46
TMEM53Q6P2H8 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.9□□□□□ -1.46
TMEM53Q6P2H8 AL359704.2-201ENST00000604335 521 ntBASIC5.9□□□□□ -1.46
TMEM53Q6P2H8 AL591222.2-201ENST00000604443 754 ntBASIC5.9□□□□□ -1.46
TMEM53Q6P2H8 AC097467.3-215ENST00000609486 793 ntTSL 5 BASIC5.9□□□□□ -1.46
TMEM53Q6P2H8 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC5.9□□□□□ -1.46
TMEM53Q6P2H8 AC097467.3-214ENST00000610249 843 ntTSL 5 BASIC5.9□□□□□ -1.46
TMEM53Q6P2H8 Z95327.3-201ENST00000610385 572 ntBASIC5.9□□□□□ -1.46
TMEM53Q6P2H8 CLK4-214ENST00000611575 1206 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
TMEM53Q6P2H8 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC5.9□□□□□ -1.46
TMEM53Q6P2H8 Metazoa_SRP.96-201ENST00000621315 318 ntBASIC5.9□□□□□ -1.46
TMEM53Q6P2H8 SNORA16A-202ENST00000628458 135 ntBASIC5.9□□□□□ -1.46
TMEM53Q6P2H8 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.46
TMEM53Q6P2H8 AL121768.1-201ENST00000613917 2544 ntBASIC5.9□□□□□ -1.47
TMEM53Q6P2H8 AC079949.2-201ENST00000617117 2933 ntBASIC5.9□□□□□ -1.47
TMEM53Q6P2H8 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.9□□□□□ -1.47
TMEM53Q6P2H8 AC126474.2-201ENST00000623268 1750 ntBASIC5.9□□□□□ -1.47
TMEM53Q6P2H8 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC5.9□□□□□ -1.47
TMEM53Q6P2H8 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.9□□□□□ -1.47
TMEM53Q6P2H8 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
TMEM53Q6P2H8 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC5.9□□□□□ -1.47
TMEM53Q6P2H8 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
TMEM53Q6P2H8 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC5.9□□□□□ -1.47
TMEM53Q6P2H8 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
TMEM53Q6P2H8 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
TMEM53Q6P2H8 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC5.89□□□□□ -1.47
TMEM53Q6P2H8 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
TMEM53Q6P2H8 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC5.89□□□□□ -1.47
TMEM53Q6P2H8 AC095038.1-201ENST00000429248 1591 ntBASIC5.89□□□□□ -1.47
TMEM53Q6P2H8 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
TMEM53Q6P2H8 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
TMEM53Q6P2H8 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
TMEM53Q6P2H8 GLYATL1P1-201ENST00000528297 1607 ntBASIC5.89□□□□□ -1.47
TMEM53Q6P2H8 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
TMEM53Q6P2H8 SEC61G-201ENST00000352861 462 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
TMEM53Q6P2H8 RNA5SP382-201ENST00000363355 112 ntBASIC5.89□□□□□ -1.47
TMEM53Q6P2H8 AC012358.1-201ENST00000366153 916 ntTSL 3 BASIC5.89□□□□□ -1.47
TMEM53Q6P2H8 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC5.89□□□□□ -1.47
TMEM53Q6P2H8 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC5.89□□□□□ -1.47
TMEM53Q6P2H8 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC5.89□□□□□ -1.47
TMEM53Q6P2H8 RN7SKP91-201ENST00000410852 288 ntBASIC5.89□□□□□ -1.47
TMEM53Q6P2H8 RN7SKP296-201ENST00000411185 341 ntBASIC5.89□□□□□ -1.47
TMEM53Q6P2H8 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC5.89□□□□□ -1.47
TMEM53Q6P2H8 AHCYP8-201ENST00000425108 209 ntBASIC5.89□□□□□ -1.47
TMEM53Q6P2H8 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.89□□□□□ -1.47
TMEM53Q6P2H8 ETF1P1-206ENST00000427296 984 ntBASIC5.89□□□□□ -1.47
TMEM53Q6P2H8 BACH1-IT2-201ENST00000436529 806 ntTSL 5 BASIC5.89□□□□□ -1.47
TMEM53Q6P2H8 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC5.89□□□□□ -1.47
TMEM53Q6P2H8 RN7SKP198-201ENST00000459286 306 ntBASIC5.89□□□□□ -1.47
TMEM53Q6P2H8 MRPS33-203ENST00000467334 622 ntTSL 2 BASIC5.89□□□□□ -1.47
TMEM53Q6P2H8 RN7SL143P-201ENST00000496780 297 ntBASIC5.89□□□□□ -1.47
TMEM53Q6P2H8 AC093325.1-201ENST00000508378 326 ntBASIC5.89□□□□□ -1.47
TMEM53Q6P2H8 AC093878.1-201ENST00000515630 432 ntBASIC5.89□□□□□ -1.47
TMEM53Q6P2H8 SFTA3-210ENST00000521945 1116 ntTSL 2 BASIC5.89□□□□□ -1.47
TMEM53Q6P2H8 AC091096.2-201ENST00000523284 587 ntTSL 3 BASIC5.89□□□□□ -1.47
TMEM53Q6P2H8 SETP17-201ENST00000534163 817 ntBASIC5.89□□□□□ -1.47
TMEM53Q6P2H8 AC156455.1-201ENST00000538790 851 ntTSL 2 BASIC5.89□□□□□ -1.47
TMEM53Q6P2H8 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC5.89□□□□□ -1.47
TMEM53Q6P2H8 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
TMEM53Q6P2H8 AC091304.4-201ENST00000565703 620 ntBASIC5.89□□□□□ -1.47
TMEM53Q6P2H8 RPS11-205ENST00000599561 430 ntTSL 5 BASIC5.89□□□□□ -1.47
TMEM53Q6P2H8 AC139792.1-201ENST00000607051 647 ntBASIC5.89□□□□□ -1.47
TMEM53Q6P2H8 MIR6883-201ENST00000614952 78 ntBASIC5.89□□□□□ -1.47
TMEM53Q6P2H8 AC007671.1-201ENST00000616957 830 ntBASIC5.89□□□□□ -1.47
TMEM53Q6P2H8 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC5.89□□□□□ -1.47
TMEM53Q6P2H8 AC127071.2-201ENST00000623293 527 ntBASIC5.89□□□□□ -1.47
TMEM53Q6P2H8 AC138965.3-201ENST00000623875 498 ntBASIC5.89□□□□□ -1.47
TMEM53Q6P2H8 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
TMEM53Q6P2H8 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
TMEM53Q6P2H8 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
TMEM53Q6P2H8 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
TMEM53Q6P2H8 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
TMEM53Q6P2H8 AC006213.6-201ENST00000623722 4179 ntBASIC5.89□□□□□ -1.47
TMEM53Q6P2H8 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
TMEM53Q6P2H8 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
TMEM53Q6P2H8 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
TMEM53Q6P2H8 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
TMEM53Q6P2H8 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC5.88□□□□□ -1.47
TMEM53Q6P2H8 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.88□□□□□ -1.47
TMEM53Q6P2H8 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
TMEM53Q6P2H8 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
TMEM53Q6P2H8 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
TMEM53Q6P2H8 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC5.88□□□□□ -1.47
TMEM53Q6P2H8 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
TMEM53Q6P2H8 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC5.88□□□□□ -1.47
TMEM53Q6P2H8 RPL24P4-201ENST00000326586 421 ntBASIC5.88□□□□□ -1.47
TMEM53Q6P2H8 SNORA70.3-201ENST00000365075 132 ntBASIC5.88□□□□□ -1.47
TMEM53Q6P2H8 RNA5SP279-201ENST00000365513 117 ntBASIC5.88□□□□□ -1.47
TMEM53Q6P2H8 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC5.88□□□□□ -1.47
TMEM53Q6P2H8 AL049697.3-201ENST00000406493 982 ntBASIC5.88□□□□□ -1.47
TMEM53Q6P2H8 RPL18AP14-201ENST00000417685 526 ntBASIC5.88□□□□□ -1.47
TMEM53Q6P2H8 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC5.88□□□□□ -1.47
TMEM53Q6P2H8 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC5.88□□□□□ -1.47
TMEM53Q6P2H8 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC5.88□□□□□ -1.47
TMEM53Q6P2H8 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.88□□□□□ -1.47
TMEM53Q6P2H8 RN7SL267P-201ENST00000485107 261 ntBASIC5.88□□□□□ -1.47
TMEM53Q6P2H8 AC093766.1-201ENST00000502606 866 ntTSL 3 BASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms